Map Locations of contig_52824 (10060 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52824

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67281 13 1950 bp MLOC_67281.9 Available Available LOC_Os06g39690.1, FRAME:-1, EVALUE:0.0, 13106.m04116 protein SOUL heme-binding protein, putative, expressed





CDS Structure of MLOC_67281






Contig Sequence (10060 bp)

>contig_52824 10060 assembly3_WGSMorex_rbca.fasta
GGAAGCATCCATGTCTTTGTACCGTTGTTGGGCAATTTTTTCCTACACAATAAAAACAAA
GTCAAACTGATGGAACCATTGTACATTATGCAAACTAATGGCTTCATTTTGATTGCAATC
AACTCACATAGTCGGATTCGGCGGTTCCACTTGGAGGCGGTTCCACTTGGAGGAGTATTG
TAAACTTGTTCCAAACAAGCTGCCTAACGGCTACAAGTCAGCTTGATCACGTCCCAATGA
CCCTGGAGTGACCGAAAGGTCTGTGCTGTCCTGTTGGGATACTTGGCCATCAAATGGAAG
TATTGATCTTCAATTCTTTTCTAATACGCCCAGGCGGTTTGTGACACCCGTGCAAGGATC
CATAGATACTGAACTTTAAGCCTTGATCAACATTTGATCTTCCAAGACCGTGTAGTTCTT
TGATCTCACGCTTTTTTCCTTGCGATTGCTGATACATCCCCTCATCTATCTCCTCCACCT
CGTCTTCACCACCGTGGTCATCAACGCCACCCTCCAATTCATTGTAATCGAAACCACCGA
CCGGGGCTTGATTGATGTCGACTGCGTTGGTGGCCAACAAGTGCATGAACTCGACATCGG
CATTGTTCAAACCACGACTACATCGAGTGAAAAGTACATCACGATGGGCGAATAATCGAA
GCAAAAAATAAGTGAGAGAAGATGCATACCTTACGACCCTTTCACCGAACACCTCGCCTG
CGGTGGAAGCAGCGCTGTAGGAAGGCACCGTCGGGGAATGAATCACCGGGGCGTATGGAG
TGGCACGAGGTTTCTTCGTAGGAACCTTTTTCCGCTTCACGCCCAAAACCTTGTTCATCT
TCCCCGTCGGTGGTCGGGCAGATCGCGCAGCAGCAGTGGCGCATGACGCGCCTTCCCTTT
CGGTCGGGCCAGCAGGAATGTCGTCCTGCACGACAACGTTGCCTTGCTGCTTGCGGGCTG
GCGCGTTGGCGACAACGGGAGCAGGGCGACATGGCCGCCGACGAGATCCGCGGGACAGGA
TTGCACGTGTGCGACCTCCAGGTGACGAGATCCGCCTGCTGGAAGGCTTCCATGGCGGCA
AAGAATGACGGGGAAGAAGGTTCGAAGCATGTGGTGGGCGGGGCAACGGCTGCCGAAGAG
GGGGGAGCGAGGGGAACGACGCGGAAATTTCCCTCGCGCCAAATCTCGTTGCGGATAAGG
GACGAGCTCGGGTCGGCATACCACCCCGTGAATCTGAAGGTTGAGGGCGAACTTTTGCCG
CGCCCCGCAAAAATTTTTACGGGCCGGACGCGTGTGCGGGGTCTGCTCTCGCAGCTTTTT
TCACCCCGACCCATATTTTGATGGTTATTTTGCGGGTCAAGGCATTATACGGGGTCTGCT
AGAGATACTCCTATGTAAGTTGCGGAGCGCGGCCGGCGATGCCCATCTTGTAAGGCCGGC
TTGTGAAAATTGTAAGAACTTCCCTCTTTCTACTAATACAAAGACATGCAATCCTCGCGC
GTTTTCTCGAAAGAAAAAAGTGTATCCTGGAAAATAAACAACAGTTTCCCACATTTCTTC
AAAAATAGAACAAAAATCATGGAACAATTTTGGAGGATGACGGTATTGAAAAAATAACGG
TAAATCAGAAATAATTCAGTGACAAATCTGGTAAAAATTCAGAGTCTTGTTTCCATTTTC
AGTGACGAATCTGGTATTGAACAATTGAAATGAAATGTCATAAACGTGGTAAATCAGAAA
TAATTCAGTGATGAATCTGGTATTGTTTCCAATACTTGTTTCCATCCCCCCACCTCCCAA
ATGATTTAAGGTTTCCAATATTTTTGGTTTGCACCTGGTAAAGTATACATGGACAATTTT
GCATTGCTATGTAAATAAATGTATTTCTGTAAGCAGTATAATTGACAGGCAGGGCCAGTT
ATATTCATGCCAGGTGGATGTAACAGTATTGGTCTTATTTGCGAGATACAGCCGTCAAGA
GATTAAAACTGGTTATCACAAATCTTGTTCATGGCATTAGAATTTTTTTGCATGGCTATC
AACTATGGAACACATATACTATATCACTAATCCCCTAGAATTGGAGGCCTCTCATTCAAT
TGAGGTCACCGAGACCCAATTTGGACAGGATCAACAATTTCCCACTCAATTATTTTAATC
CTCTATAACACTAAGCTCCCTATTGTTTAATGCCTCACAATCAATTGAGCTTTCAATATG
AAGTTGGTTCAGCCAATTTTGATTGAGTCAGCAATTCACAGTGAGCTCTCTTATTCATTT
TCTAATACACCATGCTCCCTAATTTTTAAGCTTCTCCCGTCAATTCTTGATTTTGACTCC
GTAAATCCTTTGTTGTGGCGATGAAATCTCTAACTTCGTTAAGCTATCCTGTTTTAAAAC
CCCTCATTTAACTCTTCAATTTTGATTGGATCGTTCATCCTGGCTCCATGATGAGATCTC
TGATGAATGGGTGACAAAACAGAAGTGTCACCCATGACACGTTTAGCATCAGCATAACAC
ACGCATCACGTAACTTTCTCATGTTTTGTACTAATTAAAAGACGTGTAAAAAATTCCATC
CAAACACCATAATAAAAAAAGAAAAATGATACACGCACGACCGATTTGCTACGAATTGGT
TATACCAGACATTGTCCCACTAATCACTTCCCCGCACCGTTGGCCCACTTTTTCCCTAAT
CTCTGATCATAAATTGACACATCCATCTTTAAGCATGATTCCATAAAGTATGTTCATAGA
AGTAGCATTATCTGATAAAAAATATATATTTCATTGTATCCCCCACCCGCCAAATCAACT
AATACGAATATTTATCAGAACTTTCAAAAATTTACATGAAACATGTAGAACCCCAAGAAT
ATAAGCAGCGCGGCAAAGCGTGCACTGCCCTTCTAGTGATATATGCTAAATCTACTACTT
TTGGAGGACTGAAATCTCCCATGGTGAACTTGTAACAATAGCCCATTTTTCACCAAGTAT
GCGACCTGTGACTATACCATTGATGTTAGTTATCACGTAGTACAAGTTTGTTTTCTTCTT
CTCATTTTCTCCTATTATTTTGTAAGAATAAACTGAAAAAAAATCTACATCAACAATGAA
AAAGTTAATTTTAGGTTATATCCCCATCTTCTAGAAAATTCTTTTCCATAACTGACCACA
TCTGTTTGGAGAAGTATATGAAGTAAGGGAATATGATTATGCAGGTATTCACTTCCTCTT
AATAGTTTATATTTTTTCTCTCGAATATGCACGAGTGTGCATATCATATATTAAAGAAGC
TCTTAATAGTTTATAATAGAGCTCCTTTATGGTTCTCACAAATTAATGTGGACCATGTTG
TACGCTCATATTTTCTATCCAAGATACTCCATCTGTACACAATACATGTCGTTGGAGGCC
AACGACAAGTATTTAGGTACATAGGGAGTATATGATGGGCTATGACTTGGCTGTACTCCA
CTATCACTTGGTGATCTCTAGATTCACTATATGTATATAGCTTTAAGTACCAAACTGAAG
TATGATCAAGGTTCTCTTAAACCCCAGATCTGTCCAGCCATACCCCTCAGGTTTTCTAAA
ACCCTTTGGCTCACGAGAAAGTGTGAAGGGAATGAATCATGAATGGTTCTAGAGACATCG
TCAGGCCTCACCAACCACTAATAATAGAATGCATGCCGGGACAGGTTAACGGAGATACGG
ACCAACCAACCTTAATTTTGCGCCCCTTGCGTCTGTTGGGCACAGACTGGATCTGCATGC
ACTTGTGGACTTGCATGGACCAATCATTGATTGGTCAGGTTTGGATAATGAGTTTGGTGA
TCAGTCAGAGCTGAAACAAAGGAATTGTGTCTGTATTTTCACCTAAAAAGGAACCGTTTG
TTGCCCATACTTTCCAATTGTGTGTCGCTAGTACAATTAATCACCTGAGTTGAATGAACC
AAGTGCTATATTCTGGTTAGACTTGACACTGCATTCGGTTTTGGGTTCAGGTTATCTTGT
GAGAATTGTGGCCCATAACAGATCGGTGGACCCAGAATACAACAGCCAGCCCAATACCCC
AGTTGTGAAAGCCCGAGAAGAAAATAGCGGCACAGACGTATAGAGCTTCTTACATGGTAT
CGTAACAAAATTCCACATTCAACTCTAGTTTAACGTACAAATAGAATCATATGACCTACA
CTTTAGTATCAGGCCTATTTTACCTTTTGGAATTTACATCTTCTATACATAGATTGCATC
TGCTCGTAACCTCTCCTGCAATGGCACCCACAACGAAACGGAAGCTAAGTGAGAAGGAAG
AAACAAGAAATATGCGGTGCTGCTGGAGCAAAGAGACATGAGTGCATGATGGAATGTTCA
GCTACCAATCATGTTGCAGTATACATTAAAATATTTGTTCAGGGATATAAATTTCAACAT
TTTATAGTATTATTTGTGCTTATACATGTAAGTAATAATCAGTTTCAATTAACTAAAGTG
TATTTCAAGGCAACAGAATCTGGTTAATGGTTTGCGAAGAACAAATTTACCATTCTACGA
TGCTCTGGAAGCTCCAACATACAGTGTCTGATGTTGCAGAAATATGCTGTACGATTTACA
GTGAAGAGTGAAGACTACTACTCCAGTGTGAAATCGTTTAGCCATATAAGCACCTCGTTC
CTCTTAGATCATGAAAAACAAACAGAGTTTCAGTCATGATTGAAAGTACAACTAAAAGAG
GGTGACATCTTCTCGGAAAGGTCGGCATTTAGGAAAGATTGGATAAAGCATGCAATTTGC
TACACTTGATCTCCTAATTGATATGTAAAAAGTTTCAGACCTTAGCTTAACTAAAAAGGT
ACTCCCTCCGTCCCATAATATAAGAGCGTTTTTAACACTATACTAGTGTCAAAAACACTC
TTATATTATGGGACGGAGGGAGTAGTACAGAGCAGAAGGAAACACACCTTCACAAAGTCC
TTTGTGCTAGGATCATTGTAACGTGCAAGCAAACAGCCTTGTTGGGGCTTCAACCCATCC
TTGAGTAGCTGGGAGCGTAGCTCCTTCTCTTTCTTGGCCACAATTTCCTCTTCTGGTCGC
CCACTGAATTTTTTCACTGCAGCAATGCCTCCTTCAACCATTCGCAAGGTAACTGCTTCT
GTATTTGGAGCTGGTAAACTGATTGAACAAGACTATTACTGGCAATAGAAGTAAAACCAT
AGAAATTATTATAGAATTACTATTTCTTCAATCTATGAGCAGATGTCCAGGTCATCAGTA
GTTGCACTCACACATTGCACAAGATACCTGTTCAAGTCTTTGTTCATTGGCAGAGCTATC
TGTATGGATACATCTGAGAGTTTGTCATCAGAAGCCTGAGTGAAGACAGGTGTAGTCATT
GCAATCTTCTCAGATGAAGCATTCTTGCCAAATATATACCTACAGGTACAGGCCCTTTCA
GCATTACAATGCATGGTGTTAAATATTTGTAGTAATGATCAAAAAAATAACCCACCCAGT
AACATTGTTAAAACCTGATGATCCTGTTAATTTTTCTCCTTTCGCTTCGACTACTGAAAA
TGGTGGATACTTCCTGACCTGCAAAAAATATGTATACTCATAGTTTACCTCAACAAAATC
TGTTAAGATGCAATATTATAAATTAGCTGTCATACAGAGTCCTTTTACATGAGATCATAT
TGGCAAGATTGATAATGAACATAATTCGCATAATAGAACTGGGAAACTTGTCAATGCTGT
GACTTAATATGAATGATGGATTATGATGCCATAGCACTGTTGCTACTCCAAATCTGCAAT
GAAGTGGGTTCTTCATAAAGTATACACAACGAAATAATACCTCATAAGTTGCAGTCTTTT
TCAGAACGAGGTAACTTGGTGTTTCTATATCTGGGGTCTTGTAGTATCGTAGCTGTGTAA
AATCAACAGCTCAACTTCCAATACTTGATCAGCATATAAAAAAGAAATGTACTCATGGAG
AATTACCTGCTTGAAAACTTCTACCAATCCTTCCAAGGAGAAGTATTCATTGTTCTGTAT
TGAGTCCCAAATATCCTGCAATTCAGCATATCAGATAAGTAGAGTAACATTTAATGATGA
GTTGGCTAAGAGTATTGTTTTGCCAAATATTCGAAATATTTAACACCTCTTGATTCAAAT
GAATGAGCATTCAATATTTCTAATACAAAATAATGCGCACTTAGGTACATATTTGGGAAA
ATCCGAATATAATATGAATTTTGGAGAATACCATTCCTTGGGATTTTTCCTATAGAGCTT
GTTTGACTTGGCATGCAATTCCAAAGGTGAAATCATAGAAAATTTTCCTTTGTTTGATCG
TTTCTGTTAGCACTATGGCAACCACTTAATCCTTGAAAAAACGGTCCGTGTGTCTTTCCT
GTAGTGCAGCTAAATAACTTCTGTTGCATGTTCATGTGCTTCCAATTCCTATTTTATTCA
ACATGCCATGACATCCAGAAATCCGATGCTTTTCCTATTCTGTGTGTTTGGAGTCCTACG
AGAGGGATCCTATGCTTGATTATGGAAGTATCAAAGTACTAGTTTTTCTCAGGCACATAT
TATAGATGGTACAAGAGTAGGAAGAACCGCGGAACATATACAACACTCTGTTCTACTTAT
ATAGCAACGCAGTTTCGAAATAGTGCAGCAGGCTGAGAAAGCGCAGTATCTCAGAATTTA
GGTTCACAGAAAAGCACTAGACCAAAAGAAAAGGTAAAAGTAAAAAAAAAAACGCTATGG
AAAATCATAAAAAATGACAATGCAGAGGGCAGCAAGATCAAGTAAGAGAGTTAAGTTGAG
AGCTGTCCCAGGCAGTCAGGTTGAACCTGAAGCACTAAACTATACGAAGACTGATAAGTG
GAAAATTGGTTGACAGTTCCTCAGAGAACAATTTGGTCAAACAATCCATTGTCTGCCTCT
GTGGGATAAATGCACTAGCTAATGATGTTGGTGTTACCGTGTAAACTCAAACCTCTAACT
AAACATACTTCAAATATTTACTTCGTCTTGAAGGCCCTGAATTTGAAAACTGCAAACATT
CAAGACCTATATATGGGAACTATATATGACTGCAAGTCCAAACTAGACTTCATAGAACAA
AGTATATCCACTAGAGGCAACATTCGACGACCACAATACTGATACATTCCCTCGCCGGCG
AATCCACTGCGCATTCAAATGAAAACATACGTTCCAAGTCCAAGGTGTGGTGCAAGCAAG
AATGAGTGCTAAACTGCTAACCACATGGCTGGAGAACTTGAGATTCTGTGGGTTGACGCC
CATGATCGACAATCCGGTGAAGACCAGCTCCGGCTTCCATGGCAGGAGAGAGAACTTCAT
GACCATGGTCCACCTCGTGGTAATCTCATAGGGCCCTGTCTAAACCAAATTCAGAGATTG
TCACGAATTTGCAATGCACACGCGCATCCTCGCTGCAAATTATGAGCACCGATCGAGGCG
GAAGAGAGGCTGACCTGCTTGACGTCGTGCAGGTAGAAGTCGGGGCGGAAGATGATCTTG
AGGAGGCGTATGTTGGCGAGGTAGCCGTCGATGTCGTCGTAGCGGGTGATGGGGTCGCGG
AAGCGGACGCGGTCGTCGTACGCGGAGCGGTCGATGCCCACGTCGTCGAACAGGTGCGGA
AGGTCGGCCTTCAGGAACTCCTCCAGCCGCTGCGCCTCGGCTGGCGTCAGCCCGGCGCCC
CTGTTCTCCCCGGCCGGTGCCGCCGGGACGACCGCGCCGCTGCTCGGCGCCGCCCCTGCC
AAGACGGCGAGGCGTGGCCTGCGCCTCCGGTAGGACGCGGTGAATGCTGCGGTGGGTTTC
CGTAGCCGGGGAGAAGTGGTGATGACGGCGGCGGTGGGCGCTGGTAAATGGATGAGGAGG
CGGGAGGAGAGGCGTGTGGCCATTGGTGCCGTTTGGGGCTGTGTTGGGAGTTCCTCTCTC
CACGCTTTGGTCTCTATACTTTCCCGATGGTTTTGTTTTTGTGCGCCGTGTTAAAATTTG
GGGCAGTGCTCTGCGCCGGCTCCGCACGATCCGTCAGCCGTTGCGCGTCCGTACCGTTAG
ATGTATCCATGTAATAAATATTCTTCAATGCAGCAAATTTTAAGCATGATGTAGCAAATT
TTTATAATGCTTACAACTAAAATTAGGTTGTAGCAGAAAAATATCAACGTGATCATAGAA
AAAACGATCCTGATGATGCGTGGTAACAAAAAAAAAAGGGTTGTAGCAAAGCAATCTGGT
AAACTCGAGTTGCAACTCTCAAGAACGTGGATGCAACTTTTTTACCGAACGGTTGCAGCA
AAAATTGATGCTGGTTATAGCAAAAGTAAAAAACATCGATTGTAACGAAAAATCCGACGA
ACTGGTGTTGCAACCAAACGTATATGCAGCTTTTTTACTGAACAAATGTAGCAAATAAAA
ACGCTTGTAGCAAATATGAATGTTGGTTGCAACAAATTTAGACGAAAAAATTTTGCATGC
CTAATCAGCTGTGTGCGCGGGTCGCATGCGGCTGGCCGAACGGTTCGGCGGGCGCACCGG
CCACAAACGTTTACCTAAAATTTAGGCCACGAGATTATTTTCCCTCTCATAAGAGCATCT
CCAACAGCAGCAAAAAAATATCGCGCCCAATAAAATTCTTAGCGCGTCATTGTAGCATTT
TTAAAGTGCGGGGACCGAAGTATCTCCAACACACGCGCGCTAGTGGGGCGCCCAATCCAG
CCAAGTCCAGCGACCCCACGTGCAGCAGCACAGAGTTTGCTGCGCGCGCAAGCCGGCGCA
CCAAATATGCTGCACCCAATAGCGTTTTCCAGCATGCGTCCAATTTTGTTTAGCGCGCAC
ACTGTTTTACAGCGTCTGTTGAAGTTGTCCGGCGCCCAAAAAACGAATCTTTTAATGCGC
GAAGCACTTTTTGAGCGACTGTTGGAGATGCTCTAAGTATGTGATCTGATTTTGATGATG
ACTAGAATTGCCGACACCTTCAATATACTATGGGGGCTGCTACGAATCAACCGAATGATT
TCTTTAAGAAATCATCCGTCTATTTAGCCCTTGGATTAGTGTGCTGTAGCTATTGGATCA
CAACAGCTCCACGGCAGCAGCGAACACGTCAGCTTCAACACAACGCCATTGAAGCCTCAG
GGAGCTCCAACGCAGCACCGAGGGGTGTCCGACGAGCTACATTGCAGCTTCGATGGAGCT
CCAACACAACACCGACGCTCCAGCCAAGCTCCATTGCAGCCCTGGCGAAGCTCTAACGTA
GCGTCGACGGGTCCGAAGAAGCTCCATTGCAACTTCGACCGAGTTTCATTGAAGCACCGT
CAACGCAACACCGACGACTCCGACGAAGCTCCATGGCAACTCCGGCCAAGCTCCATTGCA
GCCCCGACGGAGCTCCACCTTAACGGCGACGGCTCCATTACAGCTCCGGCGGTGTTCCCA
ACAGCTTCAAGGAAACATCATCGGAGTTCCAAAGCTCCCCGCCACTCGCCACGGTCATCG
TCGTAGCAAGCAACGTTGCATTGTGCGTCTTCCACCGCCGATGAGTGCAGCGCCATGGTC
ATCACTGCGAGTGACACTGCGTTGCAGCGTCTACCGCTCACGAGATGCAGGTTGCAGCGC
TGCCGTAGCTCGCGAGATCCGCATGTTGCAGCCATGTGGTCGTTGCCAAAAAAAGTAGCG
GTGAGGATTGGGCATCTTGCAGCAGCTGGTGGCGAGTGGTAGCTCCGACGATTACCGGCG
AGACTGCACACACACACACACACACANNNNNAGAGAGAGAGAGAGAGAGCTAAGGAAAAA
AAAGAGCGGATGGAAGATGTGCTAGCGGAATGAAGGTAGAAGAGAGATGAGGGGAGAAAT
GAATGGCTGAAAGCGACGCGCAGTGGCTAAAGATAAGAGCAAGGACAATAGTAGAGCCGG
TTGCCGGCTGTAAGCTCATTCCATGTCACCTATAGCCCATCTTATAGCTAACATGTACAA
TAGTTGGTTAAAAGAGTGTACTACTTATTTATTATATGAC