| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_52790
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67256 |
3 |
3095 bp |
MLOC_67256.3 |
Available |
Available |
LOC_Os01g36390.1, FRAME:-2, EVALUE:0.0, 13101.m03685 protein MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed |
CDS Structure of MLOC_67256
Contig Sequence (8919 bp)
>contig_52790 8919 assembly3_WGSMorex_rbca.fasta
CTAGGGCATAATTCCAACAAGAGGTGTCGGATTTGTTGCGCATGGGGAAGGACCACGAGT
AGTGAGGAAAATCATCGAGCACAATAGGGTAGTACTAGTAGCCAGAGAAGCTTACAATGG
GATATGTCCACAAGTCACAATGTATTAAATCAAATGGAGCAAAGGTTTTGCTAAATGAGG
ATGAGAATGGAAGGCGCAGCTGGCGACCTAATTGGCAAGCATTACAAGGGGAGTGAGGTG
CCTTATTACATGTGCTAAGAAAATCTTTGGCTGGAGTAGACAAGGAGTGCGCGCCGGGAT
GTCCAAGCCGGCGATGCCACAGATCCGTCGTGGAGATGGTGAAGGCGGATGGTGAAGCTC
GTTTATTGCCGAAGAAGGGGTAGAGATCACCATGGCTGACGGAGATCATGAGAACCCTCC
GAGTGCGAAGCTCCTTCACAAGAAAACCAAAGGGGTAAAACTCAATTGAACAAGAATTGT
CGCGAGTGAAGCGACGAACAGAAATGAGACTAGTGACGACAGTAGGGGAAACGAGCACAT
CAGTGAGGCAAAAATCGTAAGAGTGGAGGGTGGTGGAGCCGGAGGCGGTGACAGGTAGGT
GATTCCCATTGCCGACAAGTATGCTAGAAGGGGCATGCTTTAAGGAATAACCAGACTTGG
TGAGGTTACCTGGATTGCCTGTCACGTGAGAGGAAGCGTCGCTGTTGAGGTACCACTCAG
GCGCGGGCTGGGGAGGGAAATCGCCGCTGATGTAGGCGGCGTTGAGCATGGCGGCGTGCT
CCCAAGACGGTGACGGAGGTGGATAGAAGGTTGTTGGTGGCGACTGGAGCATGGGGTAGG
CCTGCGCATGTGACCCGAGGCGCGGGCCAAGCACGCCCGCGGCATTTGGAGGGACCCAGC
CGGGACGAGGGGGCGGCAGCGCCATGCCGTAGGGTGCGAAGTAGCCGATGAACGGTGCGG
CAGGAGGGGCGGGGTGGCGCCCGGAGTTGTCGCCACGGCCGCGTCCACGACCACAGCCAC
AGCCACCGCGGTCACTACGACCTCGACCAGAGGGCGGAGGTGACGGATGAGGAGCGCCAG
GGCCGCCGTGGTCACCGCCGTTGCTGTCACTTGGTCGATCGTTGGTGGCGCGGTCGCCCG
TGCTGGAGCTGCCACTAGAGGAGCTGCCACCAGTCAGAGCGAAGGTCGAGGCGCTCTCCT
CGGTCGCGCGTTGTGCTTGGGACTCGCCGGCTAGGGTGATTCGGGAGAGGACAGTGTCGA
AGGGGAGGTCCTGATCGTCGATGATGACATGGATGGTGTCGAGTCGCTTGTCAGGGCCAT
GGAGAAACTGGGTGGTGAGATCCACCTCCGTGACGGCGTGATCGATGTCAGCCAAGCCAT
CGGTGAGGAGTTTCATGCGACGCGCATATCCGGAGACGGAAAGATCACCTTGCTTGAGGT
TGCGATACTAGCGGTTGAGAATCATGTAACGAGCGGCGCGATTTGCAAGGAAGAAGTCCT
TGATCTTGTGCCAGAGCGAAGGTGGTGGTGGCGCCGACGACGTGGTCACACATCGTGTCG
GAGAGGGTGGCGTAGATCCAGAGGACGACATGAGCGTCCAGCTTGAGATAGGTAGCGGTG
GCGTTGGGAGGGGGTGGATGCTCAGTGAAGTAAGAAACGCCATAGCGAATAAGAACCATG
AGGAAGAAGGTCTTCCATTTGTGGTAGTTGTGATCGGCAGGGTTTAGAAGGAACTTGATA
TGATTGGGATGTGGTCGTTGTAGATCGGGTGGCGCGACGCAGGGCCAGGAGCAGTAGGAA
GAACGGTGGCGTCGGAGGAGAAGAGAGGGGCGAACTGGGAGCCCGAGGCATTGCCGGAGA
CGGACGGTGGGGAAGAGGCAGCGGAGGAGGAGGGGTTCATGACCGCGACAGGCGCCGTTG
GGGAGGAGAAGGAGCCCGACGAAGTGGTGGAGCTTGTGGCGGCGAAGGCGGAGGGAGAGG
AGTCGGGTGTGGCCATGGAGGAACCTGAAAAATCTAATACCAAGTTGGAATGAATGTTTT
CCTTCCTTGATTGAGTTACTTACAAAGTACACAATATATAGCCTAAGTTGTTCCTACAAG
TGTGGCACGCAGGCCATTAGTGCTATAGATCCTACAAAGTAGGAGTGGTATCCTACAAAG
TAGGAGTGGTTACAACACAACGTGACAATGCTATCTTATGTACAGCTTAACAGGGCCTGT
AGTGTAGGATGATTGGGTGCAGGTGGCTCGTTCGGCGATCTTTCATGGCGTCAACCGTGC
CTGATTTTTGTTCTTCTATGTCCTCCGTCAGAATCGAAGCAACGTTATGTGGCCACTGAT
CGACATGTCGTCGACAAGGGTGGGCTTTGCCCTAAGTGTTTCAGTCTATGGGAATGGGCT
TGGCCTTGTTGTTTTGATTTGTGCTCGGTTTTAAGGAAGTATTACTCCTTGATCCAAGCA
ACTTTTTTGATACTACTTAGGGCCTCCTTTACATCTTATTTCACCTTAAATTTAAGGAAG
TATTACTCCTTGATCCAAGCAACTTTTTTGATACTACTTAGGGCCTCCTTTACATCTTAT
TTCACCTTAAATTACATTTTAGGGATATTCTAGACTTTTCACCAAAGAACTATAAATACA
CAAGAACTGGATGACTTATTTCCACAACAGCTTGTGTGAGGCTTATACCCATCGCAGTTT
ATGCATGAGCTGGATCTCAAAAGAACTGTCCTTACTCTATTTACGTATATACTTATCCAA
CGCTACTTTGGAAGGAAAAAGTAGAAAGGAAACATGTAAAAAATGGATGTTGCTTGGGAG
CCAACAGGCGACAGAAAAGGTCGTAAGGAAACAGGTCGGGTTTGTTTTGTTAGCACCGCG
GCAGGGCAATCGTCAAATTAATTTTTAAAAACTCTGTTGTGGGCTACTCGTGACGTATAC
TTGCAAATGAGCAGGAGCCCACCAGACAAGAAAAATGGATTTATGCACCATGGAGCCCAC
GTAGACAAGAAGCAAGCACAACATGTCAATGCCACTCAAATAAAAATATGTCTTCATGTA
AACACAACAATCCCAAGAGCAACTTAAGAAATCTAAGGCACAGGATAGACCTCCATCTAG
AAGTCAGGGCCATTAAAAGACCAAACAGGTTAGCACCCAGCTCTACAAGAGAAGAGACGG
GAGCATGGTAGGTTCAGTTGATGCTGGCTACAACGTCGCTACAAGAGAAGAGACGGGAGC
ATGGTAGGTTCAGTTGATGCTGGCTACAACGTCGCCATGGGCAAACACATCAGGTCCTCT
TGAAACTGTCTCCGTGGACAAATACGGAGCCCTCACTCTGCAGAGTGCCAAGAGCAACAC
GGAGCTGCGTAAAAATTCAGGAATGCATTAGCATGTATGTATGTCAGGCCACCAAATCAG
GGAAGTACTCAGTAAACTAATATAAAAGCGTTTAGATCACTAAAGTAGTGATCTAAACGC
TCTTATACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTACAAATGGATGTATCT
AAATACTANNNNNTGACTAGATACATTCATATCTACACAAATTTAAGACAAGAATTTTGG
GACGAAGGGAGTATTAGTTTACAGAGGAAGTAGAAAAGAAACTTGGCTTGCCACTTACAT
CATGCTGATGAACTTCCATGGAGCTCTGCTTCCTCACTTCTTCCAGCAACTGTAAGGAAG
GAACAGCACTTGGATCAGGACAAGGGGTATGGTATCAGGGAACACAACATGAACGGAACG
GTCAGGTTTCGTTACCTCAGCCATACGCATCGAGGGCCCTCCAAGCTGCATTTTCTCCAT
GACAAGGTCTCGGATAGCTGAGACAAGGTTGTCACGTCTTTGCCTTTCACTTGCAGATAC
CCCAGTCATGATTAGATCCATATCAATCGTCCCTTTTGTGATTGGACAAAATATATCAGG
ACTGCAAACTAGTGAAACAAGAAATAAAATGTATGACAGGGTAAAGCAGGTCAAACTGAC
CTGTTGCATGATCAGTTGCAGATTGCTGCATGGCAACTTCAAGAAGCCTAAAGGCTTCTG
CTACATCTCGCACTCCAACCTACCAAGCCACAAGATCAAAAAATTCAGTCTCCAAGACAA
AACACAATGAAGATAGTATGAAGCTGAACATGGTAAACAAACACAAACAACAACAAAGGG
TTTCAAGTCCCAAAGCTGATCATTAGCAAGTACACCAAAATCCGTGAATAAATATTACCA
CTTCTGAAAAACGCATTCGTGCCAGTGCTTCACTAAGACGGATCAAGCTCTCAATTTGCC
TAGCTGTTGCTGTGATGACCTGCCCACCAGTTAGAAAATCAGCCATGGCTTATTATAATT
AAAAGCATATGAGCAAGACGGTACAACTAGACTACCTTCTTTCTGCTCCCAGGATTGTTC
CCTCTTTTCCTCATCTCAACATAGCCACGGGTCAATTCTTCTGCAGCTTCATCAGATAAC
TTTGGCTGAATAAACTTTCTTGCATAGCTGATGTACGCAACTAACGTGGGCAAATCCAAG
ACCTGGTGCTCCACTACCTGCATAGTGGCATGAATAACAACTATTCAGTAACTGGATGAT
CCTAGGACAGTGTTATAATTCATTAAATTCTTGTACTGTTGAGTCTTTGTCAAACGGAGC
AGTTTCGTTAATAAAGCTTCAGGTATAAGATCTGGGACTTACTTCTGGATTCTCGAAATG
CAATGAGACAATATGCTTAGCAAGGCGTCTATCAGTTTGTTCGTCTGCCTTGTCCAATAT
CAGATAAATCAGGTCAAACCTGCATAAAGAATACATGAAGACGGTTACAGTACTTCTAAT
CTTTTGTCCATGTTACAGTACTTATAATTGTTTGTCCAATTACATTTCATGAAGCAGAAC
AACTTACCTTGACAGCAGTGTTGGAGGAAGGTGGATATTGTCAATCACAGAAAGTCTTGG
ATTGTAACGCGATTCAGATGGATTTGCACATGCTAGGACAGATGTTCTAGCATTCAAAGA
TGCAATAATTCCAGCCTTTGCAATGGATACAGTCTGCTGCTCCATCACCTGTATATTTAA
GGAACATATTTAGGTAATCATATGTTCAATGCAAATTCAGAGGGGACAGTTCAGCGAGAG
GGCAAACCTCATGCAGCATGCTTCGGGCATTATCAGACATCTTATCAAACTCATCAATAC
AGCAAACACCTTTGTCACTCAAAACAAGTGCTCCACTCTCAAGAACCTAAGATGCACAAT
GCCGGTTATTAAAGATGCAAGTACATAAGATTTATTATGAAAATGATAGGAATCATGGCA
ACATACAGTTTCACCAGTTTCAGGGTCCTTCGCAACATAAGCAGTAAGGCCAACTGCTGA
ACTGCCTCTTCCACTTGTGTAAATACCACGAGGAGATAGTTTATGCATGTATTGGAGAAG
CTGGGATTTGCTTGTTCCAGGATCACCAACAAGCAAAATATTGATGTCACCTCTGAAGTT
AGCTCCAGAAGGAAGCCTCAAAGCATTGCCACCAAAAAGCTAAGCAGTATATAGCATTTA
ACTATTAGCTTGCGAGACAAACTTCTGAAGGGAAAGACAAATATTGCATGAACATACCTG
GCAAAGCAGGCCCCTCTTAACATCATCCAGTTCCCATATGTTTGGAGCCAGTGATCTAGT
CAATCTATCATAGATGTCAGGCAACTTTGAAAGCTCTTTTAATTTATCTATCTGCAATCA
GAAAAGAAGAGAGTATTAATAAGATTTCCATAAAGTCCAATCCAAAAGATAAAGGGACAT
TGGAACAGACCTTATCTGTGACATGGCTGTCTTCAGAAGACTTGCTAGCATTGGTGTTAT
CAGTATCCATAGAGTCCTCAATATGAAGTCTGGACTTGTCTGTCTTCTTTATGTGAAGGC
AATCAATGTATGTCTGATCAATGAAGGAAATTATTGACAATATGTCAGCACAATTTAAAG
CGTTTTCAGACAAGAAAATCATATAACAAATAGGATAACTCTCAATCCTGTATCATCTAC
CTTGAATATTGACTTCACAGTCCTCTGACTTGGTCCGATTCTGATACTCATGGCCCTGTA
TATCCCAGTTATCTATCAAAAGGTGCAAAGGGAAAATTAACACTTCCGACAAACCCAGAA
GCAAAGATATTTTTCAATGGAAACAAAGTTATACTCCTAACCTCAACCCTATCTCCAGGC
TTTCCAGCATCAACAAGCTTATCATGCATCAAAACACTGACTGTATGAGGAGTGCCACCT
TCCGGTATCTCATCTGGTGTTTCCTGCAACTTTATGATCTGCTTGTCCGCAAATCTAGTT
GTGAACAATATATTCCATCAAATAGTCAGGACACTGAATCAGTAAAGCATGGTAACAAGA
CAAGAGACTGAATGGAGAATATAGCTACCTGCATCGGTTATGCACTAGAGTCATAGAGTT
TGAGGCTTTACATTGTTCTTTCTGACATATGTGTGGCTCAGTTACTCTCCCTAGAAAGGT
AGAATTTTGAACATTAGTTTCATGATATAAGAATATAAATAGATGGAACATCGATCACCA
TATGATTTGTAACTAGTACTATCCCTAACCCTAAAAAGGTTAGAGCGGGCACATGAGGTG
CTGATTTACTAAGTATTTCAAGAAAAAATGTAAATTAGCCGAGAGTTAAATTGGAGTCTG
ATCAAAAACAGATTAAGACAAGGGACAATCACAATCATGACAAGTAGTAGTCCATACTTT
GTATGTACACAACAATATGTTAGCATCTAATGAACAGTAATCGAAATTACAAACAAAAAA
TTGAACACAAATCAGCATTGTGTGAAACAACTGTCATACCTCTGTCAACCATGACAGGTT
CTGAGTAAAAGCCGCAAACAAGGCAGCGGAAGACAGCCTCCTTGAGCTCTGGTATGACGG
AGCTGCCTCGAATTATCATACCCTTGATTGACACCATCTTCTCAATATCTGCAACAAAAA
AGAATAGCCCGTCCGGTTAGACAATGGGCGGTCTTCTTGAGCCTTCGTTCTGAAAAAAAA
CAATGAGTGGGCACTAATGTTGGAACATCAACGGTCTAGGCACAGGTAATCACCTGACGG
ATTCAGATTCCTCAAGCAAATGGATGACTTGAGGTTGTAGATCCTGGTCTGTATGTGCTT
CTCAAACAGCGGCTCCATACGCGCCACCAGGTCCATAAGGACGATGTCGAAGATGGCAAG
CACTTCCAGCGGGTAGCGTACCATCTTGCCGTATAGGTCGGGATCGTGGTCGAACACGTC
GTGTGCGTCAACGTCGAGCGACTCGCCGCCCTCGAGCTCAAGGATGCGGTGGATGGCGCG
CATGTACTTGCCCTCGTCCATGACTGGGTCGACCCGGCCGGCGTCGCGGGGGTCCCGGAA
GTGGCGCAGAAAACGCAGAATGGCAGCGTTCACGTCCTGAACACTGATATTGGTGCCCCA
GACGAATACCGGGGTGGCATCGGCGCCGACGCCGCCGCCGTCGGTCTCGGGCGTGTCCTC
CTCCCCAGCTTCGGAGGACGGCGGGACGTCGTCGGTGGACATGGGAGTGGACGGAGTTGG
CGGAAACCGTCCAGTCCAGTTTTGGCGTTGCCGGCCGGCACCAGCACCGGACGGAATACG
GCGGCCCGGTGGCGGCGGCGTCTCGAACCCGCCGAGGGAGGGAGACGAGGTGGGGCCGCG
GCGGAGGCGCCCGCCGGCGCGGCGAGCGGACTGGGGAGGGGATGAGTTGGTGGCCGGGAG
CGGGCTCGACGGGCGGACATCCGGCGCTACAAAATCAGCAAATACGGTAAGATTTTCGCC
ACGCGCATCGTTAGATCAGCAGAGAAATGACGCGGATCTGGAGAAGAGCTGGAGATTGGA
TCTTACAGTAGGGTGAGTTGCTGTTGCCGCCGCCGTTAGACGCCATGGCTTGCGCGCAGA
GAGAGGCGAGAGAGGGAGAGGGAGAGGGAGAGAGACGAGGGTTGGGGTGGAGATGAGCGG
GAGGTGGAGGGGAGGGGCACGGGGCTGGGGTAAATGGCGGGAGGCGGCGGCGGGAAGAGA
GGAATGGCGGGAAGAGATGCGGTGTTTCCCGCCAAGTAATGGGTTGGCAGTTTATGGGCT
GCTACTGTGTTACAGAAAGGGGAATGGCAGCTGGGCCGATACAGACACTTTAACCAGGTT
TGGACTCTCAGGAGCCCATCAAATACATCTCAGGATACTTTTTTCAGCGGACGATAATAA
AACTTGTGGCACGTATCTATTTTTAAAATCATTATTAATTAAATAATACTTCTTTCAAAG
TCACAGAAGCCCATCAAATACGGAGTACATCTCAGGATACTTTTTCAGCGAACGGTAATA
AAACTCGTGACACGTATCTATCGTTAAAATAACTAATTAAAGAGTATTCTTTCAAAAGGT
CACTTCCATCTCTTTAGGTTGTGACGGGTAGCATATTGTATATATGTTGTTTGTAGAGTT
TTTTTCTTTTTTTTAGATATTTGTTTTTTTTAATATTTTATCTCTTAAATCGTGTGTTCA
AATGTTAAACCTTTTTTATTATTCGATTCCTTGAATCGAGGTCTTTAAAATTATATCTCA
TATTGATACGTTTGGACGAAAAAAAATTAAAAATGAAAAATTGCCTCCTGAGGAAGCTCG
AACACATGCAAATAAAAGGAAAAAAAAGAGAAAAGCCCTATTTTAAAAGTAAAAAACGAG
TGTGGAAAAATAATAAAATAAAATATATAAAAACATCCAGGATGTGACACCCGACGACAG
CTAAGAACACACTAAATGACGGCGCCTAAGAATGAACCTTGAAAGGCTTTTGAAGAAGCG
CTCTTTAATTAATGGGCAATGCTATGAGTCCTCCGGCGG
