morexGenes - Barley RNA-seq Database

Contig contig_52732
Source Contig contig_52732
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_52732 (8290 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_52732

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_67214	4	996 bp	MLOC_67214.2	Available	Available	LOC_Os04g04254.2, FRAME:-1, EVALUE:2e-58, 13104.m00349 protein sterol 3-beta-glucosyltransferase, putative, expressed
CDS Structure of MLOC_67214

Contig Sequence (8290 bp)

>contig_52732 8290 assembly3_WGSMorex_rbca.fasta
TGATTAGAAATTATAATGGATCTATAAAACATATGATTCGCAAGACTATAAGGTCAGATC
ACGTACCAGTTTTCGGAGGTTTTACGTACTGCAAGATCTTGGTCGAGTGCCCCAAGATCA
AGACGTACTTCCGATAGGCCCAAGGACCAGATTTTTAAAAAAGAGCTTGCTATTAATTGG
TTTCTCAAGTGGCAGTGCACGTCACTTCATTCTTTGCGATAATGGAGGCCTATGTGTCAG
TGAAGACTTTTGGCCGTGACAAATGCATTATCGGATAGAAACCATCTTTTAAAGAAAGTG
GAGACAAACCGCTACACTTGGCGTGAATTTTACTGCTTCGAGGGAGTTAGAGAGTCGCCG
GTCGTCTTGCAGATTCAATTCCCATGACTGACCATTTTGTTGAAGACTCGCTAGGAGGTA
CGCAGAGCGTCCAGCGGTAAAGATTTTGTTGAAGACTTGGACCATTACCGGCCAATGCAT
GATCGATCGATCCATCGATCGAAATCCTTCTTTTACTCGAAGTGGAGGCAAGCCCGCTGC
ACTTGGCTCGCAATTTACTGCTTTGTGACAGGTTAAAGGGTTGCTAGGTCGTCTTGCATA
CGTTAAGGAATCACTCACTACCCAAGAAGTAGCTAGTCCATGATGTGTCACTCTTGTCAC
TGTGCGTTCGGTTTATTCATTTTACATCGTTCGGTTTATATGGTTTTTCCGTTTCTATGG
TATTAATACTTCGGTAAATATAGTATGGAATTTAGATACGGTTCGGTTTTGGTATATAGA
ATATTATTTCGGTATGATTTCAATATATACCATAAAAACCGAAGTTTAGCGAATTTGAAA
ATGAAACATAATAGTTTACAAATTTTTGACTCAATACACATATCTATGTATACAAAGAGT
ACATAACTATTCCCTCTGTTTCTACATAATTATAGTTGGGGTGAACTAGTCTAGTTCAGC
CCAACTACAATATTTAGGAACAGAGGAAGTATATGCAAGTGTATATGCATGCATGGATTC
AATCGATGGTTTTGGACGTCCTTAGAATTCTTTTGAAGAGAAATGTGACTACGTTACAAG
AAAAATGTATATGTGCTTAACAGGAAATCTAGCTTCTTTACCAAAAATAACTACTTGTAT
GGTTGTTTGCCCCAAGATATTTTGGTTTATTTGGTTAACCGTTCGTTTTTTTGTTATATA
CCAATAAAACCAAAATTCAAAACGGTATGAAAAGTTCATACCATATGAAACCAAAAAAAA
CCGTAAAATTGGTTTGGTTTCGTTTATATTTGGTATGATTTTTCGGTTCGGTTTTAAAAT
GCACATGCTGAGCCACTTCAGCTCCGGTACGCAGAAGGTCCAGAGATAGTAGTGCTCGTT
GTACACATTTTGGCCATGACCAATGCATTATTGATCAAAAACATTTTTTTACAGATAAAG
TGGAGGCAAGCCCACTGCACTTGGCGAGAATTAAACTGCTTCGAGAAAGATTAGAGTCGC
TGGTCGTCTTGCAGATTATGTCCCATTAAAGAATCACTCACTAAGAAGTAGTGCCAACTT
GAGCTCTGCATGCAGCTCAAGCCTATAAAAGCAACACATACCTGTATCTAAGACTATCAA
AGGCAACACCGTTGGAAATTCATGCATGCCCACCATGTTACATACCAACAACATGGCATG
TCCTCTGTTAGCCATCCTCCTCCTCTCATCAGCTTTCAACCTCTTGTCATCTGCTGCAAC
ACTAGCAGATAGCATCCAGACCAACAGAGATGCTCTGCTCTGTCTCAAGTCCAGCCTCAA
CGGTCGCACCCGAGCTTTGGCCACATGGAATAACACTACCTCGCCAGATTTCTGCACTTG
GCACGGTGTCTCATGCACAAGGAACCAAGGCCAGCGCCTCTTGTGGTGGCCTTGGATATG
GAGGCAGAAGGCCTCTCCGGTGAGATCCCATCTTGCATCTCCAACCTCACTTCTTTGGTA
AGAATCCACTTGCCGAACAACACCCTCTCCGGTCATATCCCACCGGAACTTGGCCGGCTC
TCTAGACTCCAGTACCTCAACCTCAGCTTCAACACCCTAAGTGGCACCATCCCGTTCAGC
ATTGGGACGATTCACAACCTTTCTTCTCTAGACTTACGCAACAATAGACTTTCCGGTGAG
ATTCTGCCGCTCCTTGGGAGGTCAACGGCTCTAGAATACGTGAGTCTCTCCAGCAATCTT
CTCGTCGGAGAAATCCCGCAATCGTTGGCAAATAGTTCCTCATCCCTTACAACACTCTTG
CTAGGCCAAAACCAGCTGCAAGGATTCATTCCAGATTTTGGTAAACTTTCAGGCCTAGAG
ATCCTTGATCTCTCCTATAATAACCTATCGGGTACAGTGCCACGCTCAATTTACAATTTG
TCTGCGTTGTTCTTTCTTGGGCTGGCCAACAATAATCTTGGAGGAACACTGCCTTCTGAC
ATGGGTAACACACTTCCTAACATCGAAATGTTGATGATGTCTGACAATCATTTTGAGGGA
GACATCCCTGCCTCACTACAAAATGCCTCATGCATGACGTTTATCCATCTAAGCAACAAC
TATCTGACTGGGGTGATTCCTTCCTTCGGCTCCATGCCTAACTTGAAGTATGTGATGTTG
TACTCAAACCAGCTAGAGGCTGGAGACTGGACATTCTTCTCCTCCTTGGCAAATTGTACA
CAACTGCAAAAATTGAACGTGGACACAAACAACTTGCGTGGCGATTTACCAGCAAATTCC
ATAGTGAATCTGCCCAAGAGCTTGACCGCTCTATCTCTAAATTCAAACAACATCTCTGGC
ACTATTCCAATGGGGATTGGAAACCTATCAAAACTGTCCATGCTCTGTCTTGATACAAAT
CTTTTCATGGGACATATACCTTCTACCCTTGGCCAGCTAAGCAATCTGATTGTGCTTAGC
CTCTCAAAAAACAATTTTTTCGGGGAAATACCTCCTTCCATTGGCAGCCTAAATCAACTA
GAAGAGCTTTACTTGCAAGAAAATCAGTTGAGTGGAAGCATACCTGAAAGTTTAGGCGGC
TGCCATAACTTGATAGCACTAAACCTTTCCAGAAATACCCTTGGTGGAATCATAAGCGGG
CACATGTTGGCCAGGTTGAATTCATTGAGTTGGTTACTTGATTTATCACACAACCAACTC
GCAATGTCCATACAAGTAGAGATGGGTAGCTTGATAAACCTTGGGTCCTTGAACATCTCT
CACAACAATTTCACAGGCAGAATACCGTCCACACTCGGGGCATGTGTCCGGTTGGAAGCG
CTTCGTGTAGAAGGGAACCTCCTCCAAGGAAACATCCCACAATCGCTATCAAACTTGAAA
GGCATCCAGATATTAGATTTCTCCCACAACAACCTATCTGGTACAATTCCGGAGTTCCTC
GACACTTTCACCTCGTTGCAATATCTGAATATGTCCTTCAACAACTTGGAAGGACCGATT
CCAATAGGTGGAGTGTTTGCTAACAGAAGTGGTAATTTTGTCCAAGGAAATCCACACCTT
TGTTCAAATGGTGCACAAGGAGAGTTTCCTAGATGCTTTGCTTCGGCATCCACAAAAAAA
CACAAGTTCGTCGTTCCTATGCTCATAGCTCTATCAACTCTCATTGCACTTGCTTTGATC
TTGGGGGTGTTCATTTTTGGTTGAGAAGGAGATACAAATCCAGTGAGAGAATTGGACATT
CATACATGGAGTTAAAAAGGATAACATATGGTGACGTTATCAAAGCAACAGATAGTCTTT
GTCTGGCCAACGTAGTCGGCTCCAGACAATTTGGGATTGTCTACAAAGGTTGGTTCGACG
CGGAAGATGGTACGGTTGATGTTAAAGTCTTCAAACTCTATTAGCATGGCGCATTGCATA
GCTTCATTGCTAAGTGCAAAGCATTGCAACACATCCGACACCGGAACCTCGTGAAGGTTA
TAACTGCATGCTCAACTTATGACCCAGTGGGAAATGAGTTCAGGGCTCTAGTCTTTGAGT
ATATGGCCAAAGGTAGCCTTGAAGAACGGCTTCATAACCGCCGGTGTGATGATTTAAGTT
TAGGCGCAGTGATATACATATCAGTTGACATTGCTTGTGCTCTTGAATACCTCCATAACC
AGTGCATCCCACCGGTTGTTCACTGTGATCTGAAACCAAGCAACATACTTTTCGACAACG
ACGATACTGCACGTGTCTATGACTTTGGTCTAGCAAGGCTAATTCATGGATGTTCATCGG
GAGGACAGAGCGGCACAACAAGCATAGTTGGACCAAGGGGGTCTATTGGGTACATACCTC
CTCGTGAGTATAGTTTACAAGCCCATTCTAAAATAATGTTAACAAAATATAGTATGACTA
ACTATATTAGTTGCTAGTTTCTTTTTATTAATACTAGCATGTTTCACTTTTGTTCTCCGC
TGAAGAACTTTTTGTTTCAAAACATTATTGCAGAGTATGGCATGGGCAGTGAAATCTCAA
CCAAGGGAAATGTCTACAGCTATAGCATTGTTCTTTTAGAAATGCTAACACGGAAACGAC
CTACTAATGAAGAGTTCAGTGATGGTTTGACGCTCCCCAAGTATGTAGATGCATCACTTT
CACGAACCCAAGACATTCTTCACCCCGGTCTTACTTCGGAGACAGGAGATCAGCGTGTCG
ATCATATCCCAAACTTGCAAGAATACAACACATTTGCGCTCAAGGATATATGTGCTCTCC
GGCTCCTTAAGCTTGGTTTGTTATGCTCTGCGGAATTGCCGAAGGATCGCCCAGCGATGC
ACGATATCTACACATCAGTAGCTGAAGTAAAAGAGGCATTTTTTTCTATGGACAACTGAA
GCAATGACCTTACATAATTAAGGCAAAGGCGGTCGATGAAGATGAAACTCATTGCTTCAA
CCACGGCATGACAATATGTTGCTATCTTCTTTTCCTTTTCAATAAGCCAATATGTTTGGC
TCCCTGTAATAATTTGGTTACATACACTATAAATATGTCAACAAGATTTTCTGATAATCT
CTTCAGACATTAATAAAGATCCCTTTGCCTTATAATGATGGATTTCTACTGGGAACTTCT
TGATATTTTCTTTCTGGCAAAATGTACTGGGGTGACAGAATTACTTTTCCCTGTGCATAA
GGTCACAAGTCTGTGCCTTATCTTAAAATTAAGACTTGTAGAACTAGGGAAAACATGAAA
CATAATTATAACCATGACATGTCTAGCAGTTTCAAATCAAACACATCATAAACTGCAAAA
GGAGTAACTGAACTAAACTGCCCTCTTTCAAGTTTTCCGTATACACAGGTTGCCTGGTCA
TACATGAGAGATCATCGGTTGCCGCAGGCCAAGGTTGCAACCACACCAAAATGATGTATC
AAATCACCAGACAAGTACTCTTTACACAACACACATACAAAAAGAAAGCAAAATGATAAA
TCATGCATTCCTGGCCGCATGTACATCAACTTCTAATATTTGGCTTCCACATTCTTATCG
CACACAATGGCATAGCGGTCATCCAAGAGCCTTTCTTTACACTCTTCTTTCAGCAGGAGG
AATGGTATACCTGCATCTGACCAGCACCTAAGAGCACCCCAAACATTTACTTACTGGGCC
AAGGAACTCTAAAAAGCCATGCGTCGGCGGGGGTGAACTTTCATCTGTTTTACAAGGCAA
ATGTTTGAGGAATGCCCTAACTGCGCCCGTTACGCCGTCTTCAGATTCCATGGCCTTGGC
AAGATCTACGGCTTTTTCTTTCACCTGAAATCACATGGGAAGTTATTTATGCTATAATTT
TACTAACAGGAGATCATACAAACCTAGTTCAGTACTGATTTGTGTATATGTAAGTCCCAA
AGCCGGTCCAATTTGAGAACTTAAGATCCCGAATTTGAACATTCTAAAGATCCAAATTAA
GGGAATGGAACCAGACGGGTTCCTATTTCTTGGGCAGTAACCAGTCAGTTCCTGGTTTTT
GGAACCCTGCTGGGTACCAAACTACCAATCCACACGATGACAGAATCTTTCAAAAACTCA
AGCAAATGCTCATTCAGAGAGGAATCACTAAAACAAAGTATATTCGGATGAAGTCTTCAT
GTAAAAAACGGTCTAGGTCTTAAATGGTGTGGATGTAAGGTTCTAAACTTCTACTCCGTA
ATTATCAATATGACAATCTAGTAATTATGTATATAGGTATATCATAATTCATAACCAAAT
CTGTAATATTACCTGCAGCCTACCTATGCACATCTGTGTCCGTATTCTTGTCATATATTT
TGCAATATGAAACAGAAGGAAAAGTAACATATGCCCAAGTGCAAAAGATTTGTAGAGTTA
CCTCTGGATCTAACATGAAGTTTATAGCATCAACCAACTTCTGCAGATTGAATTGATCAA
CAGGTATAGGCGAAGGCCCAACCCCTCTAGCATGCACCCGCTCTCCCCAGAAAGGTTGGT
CGCCAAAGAAAGGTACAATAGTTGTAGGACACTAAAATCACCAAAACAGTGGGTTAGAAC
TAAACTGAACCTAAGAACTGGTCCAAAAATAGCAAACATTATGATCAGGTGCTTGTTGCC
AGTTGCGTAGCTAGTTATAAGAGTTCTGTATAGTCTTTATTTTCTTCTTATGCTTTTGTA
AAACATTTGCCTGTACCATTTATTTAAAATTAATAAAAATACGAGGCAGAGTCCTGCTGT
TTCCTTCAAAAAAATTACAGAGAAAATGCTGCTAATAAAAATTATCTCATTGGCAACTGC
AGGAATGCCCTCATCAGGGATATTTTCAGCTGATTCTAACTCTACCTAACAATAATTGGC
TTAAAAAATTATACTCCCTCCGATCCATATTAAGGCCCTGTTTGGTTGGGCTGTGGATTT
TTGAATGCAGCTGTGGAAAAGTAGCTGTAAAAAATCTGCCGTGAGAAAGTTGTAGGTCAT
TTGGCAAACTAGTTATATGAGCTGTGGCTGTGAAGATAAAAGTCTGAAATACCCTTAACA
ATTAGGTTGGTTGCGCGTTGTTTAATAATAATAACATCATTATAAATTGCTTTGGAGCAG
TAATAAAACCTAATCAAATAATTATTCAAGTCTTATGAGCGGTGGCTACGGGGTGTTCCT
CGGCCCCGTTTGGCACCGGCTGCCGAGCAGTCCCCGGTGACGAGGGGTGGTGGTGGACTG
GAGAAGCACATCGGGCGGAGGAGGATGGGAGCGTCCGGCGGCCGTCGCTAGCCGGTGCTC
CTCTCCGTTTATTTGTAGCGGCAGAGGCAATAGAAGACCTCCTGGTGGCGGAGTGAGGAG
GTTCTTCGGACGGATGGGAGACGAAGAGGGGGGGAGGCGTCCGGCGGCGCCGGCTGGCCA
GAACCACGGGCTACTCCGCGGGTCAGCACCTCGCGGCGGCGTGGGAACAACCCTTGTCGC
GAGAGGAGAGGAAGACGAGAGGTGAGTTTCTGTCATGGTTTCCCAAATCGGTCGTGACTT
CTGGTCAACCCATCCAATGGCAAAGGTAGGTAATTCCACCCATCTATCAGGGCTAGGTTT
GAAGGGGCACGCAGCGAAGCTGGGAAAGCACCTCGTGGGCTGCTGCCCCTCGTGCGTGTA
TTTTTGGATGCGCTTCCGTGAAATCAGGGCGCGTCGGTTCGCTCTTTGGCCACGATTTGG
CTGCGAGGCAGCGGAATCCGGCTGAAAAAGCGAAACCAAACAGGGCCTAATTGTTGCTGC
TTTATTACTAAAGCAGCGACAATCAATATAGAGGGGATACTGTATTTGCATCGGGAATGG
TGTGGAACTGTGGAAGTCATGTGACATTGTGATGAATAGCTCGTAACGTAATGCAACAGG
GAGCGAGGGAGTACCGCTGCTTTCAGGCCAGCAGCCGTCGTTCCAGCACCCCACCATGGT
GTACCTGTGGGGTACAAAAAAGTGTGAGTCCTCATCTCAACAGAATAAACAGACATTATT
AGCACCGTGGCCACAGTGGAATTCTTTCACCAGATTTTCTCAAGTATGCCCCATGGAAAT
TGTTCGTTAATTAGTTTTACACAAAAATGGGAAACATTTAGAATTGATTGATGATCACTA
AAAATACTATATGAATTGAAGATAAATGCACCAACCCACCTAGAGTAGCAAGTAGCAAAG
GCTTACCACTGCCTTACACTGCAGGAAAAGCCAGTCACGAGGGCAGTTGTCAAGTACATA
TATGGAATCTTTTGGTTCTGCCACTGCAAAAGCCCAAAGGACCCAGAGTAGCAAGTAGCA
AAGGCTTACC