Contig Data
morexGenes
Links



Map Locations of contig_52716 (5045 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52716

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67204 2 3171 bp AK376458 Available Available None





CDS Structure of MLOC_67204






Contig Sequence (5045 bp)

>contig_52716 5045 assembly3_WGSMorex_rbca.fasta
CATCAGTTGATGCATGCTCTCCTCAGCCCATACACCCTACCAAACAGCGAAAAGTGGGTC
GGGGAGGGAACTTTTGGGCTCATACACTCTCCATGCAGGCTACCAAACACGTCCGCCCTA
CGTGAACTGACCTGACCTTACAGCCGACACGTCACACCCGGCACTGAACGATGCAGCAGC
TAAGCTAGCTGTTGAGTGTGGCATCTTTCGGTCCGTTCGGTTACACAACTCAAGGCTAGA
TCGTTTCGATGCAGAAAGGATAGTCAAGGGCGTGATGTTTCCCAACTTTTGGACGCATGG
TACAATGCACCTGCACGGGCTTAACGATCGCCATCATGCGTGTGTGATATTAAGTTACCC
ATCACTGCCGTCCACAGGTCTCTTCCCTCTTTCATTTTTACCCGTGTATATGTATGTATG
CTCTCCCCACCGTCTCTTTCACTTTACAGTTGCATCGCACCACAGTAGATGAAGCCAGGC
GCGAGAGGCATTTTATTTTAAGCGCGTGCAAGTACGTACATCGTGTATGCATGCAGCAGC
GGTGGGCTGCTTTTCTGCGCCGTGCCACTGGCGAGGAGAAGAAACGGAAACATCTCAGTG
CTGGTTCCACGCGCAGCATCGACCGATCAATTCAAGCTATGCCTGATACCTAGGCAAATT
ATCACCTGCAGAGTAGCTGGTTAACAGTGCTCCGTCCATCCAGTTGCTGCTGCTGTGAAT
AATAATGCATGCAGCTGGGTCCGCGTGTGCATGCCTTTCTCCGAGAGAGACGAGAGATGG
GTCGACTCGACTCGACTGGCAATTTGGCAAAGCTGACGGTGACACGAGTGGCTTGAGACG
CCCATCCATCTCCATGCGTGCGAGGTCAAGCGGGCTAGTGGGGTTCGTACGTGTGCAACC
GGCCTCGGAGAATCTCTGAGGGAGAAAATGAACGAAATGGTGTCTGAGCAAGCTACGCGT
GGACGCATGATGGTACGGCATGGTACGTTCGGTGGCCAAGTGGCACTAAATTCGCCCACT
AGTGCGTGCTACCAAGATGCAGAGTCAGATTCCGTTAAGGTGGAGATCAACATGCATGCA
TGCAGAAGAATATACCCCCGGCCCCCGAGCTTCCGTTCTGTCTGGCCTCCAGGCTTCCAG
CCAGCACGGCGCCTCGCCAAGGAACACATGCACCGATGCACGGGCGCACGGCGCAATGAT
GCCAGAGCAGTAGGGCACCATTGCGAGTGACGTAGGCGTAGTTACCATGAACTGTATTGT
CATCTGCACACAAAATCGCAGCAGATCAGCACGCCTAGCTAGCTAGCTGCCTGCATTCGG
CTCGACGTGCTCGGTGCTCCTCCCATCCTCTGCGACTTGCTGCGACCGGCTCGGCCACAG
GCTTGGCGGTAGCTAGCTAGCATCATCGCCTGCAACTTTGCAAGTGTCTGCTCTGCTCTG
ATAACTAGCTAGCAGGAGTGCTAGCTAGGAAGATATGGGTGCGTGGCCGGGTGAGCATGC
CTTGAGTGTCACTCGAACAATCGATCCGGCGTCCTTTCGCTCCATGATCAAGGGTGCAGT
GGACCTTCCACTTCACCTACTGCCCGCTCTGCTTGCAGCCGGACAGGGGAACATAGATAT
TGTTTCGTCGCAAAAATCATTTCATTACTTTTCCTGCCGTCGGTTGAACGTCTCACGTCG
TGCTACTTCGCGTCAGACATTTCTTTTCTGAAGGAGAATAAATTTAGATAGATAAGAAAC
GTCTTTCCTGTTTTACCTAACAAAAGTAAGTAAGAAGCGTATGTCATTTCATCGGCATCG
GGTCATGTGGCTGAGCTACAGAAATTACAATTGAGCTGGTCAAGTAGCGTGAAATGACAA
AGAAGCTGCAGAAACAAGCTGGAGATTCATAGTTATAAAATAAGAAGTCAACAACACCGC
AAGTCTTATACTTTTATAAAAAAAACACCGGAACAGCCCACAACCAAAGTCCATGAATGC
AGCCAGGAAGAAGTCGTGCTAGAGCGAGAAAGAGCAGGCCAGCATCCACCTTTCGCAATG
GGAAGTAGCACCCGCTGGATGAGCTGTGGAATGTCTGGCCAGTGAAACCCCCTCGACGAA
CGAACGAACAACGAGAGAATATACGCACTTAGACATCACCTGGCTGGCTCTTATGCCTCC
GCACCAATTTCCCGGCTGTTGGTAGAATAAAATCCCAAGAAGCAGCTTCGAGTTTACAAC
TTGTCCACTAGGCAACTTGTCTCAAAAATCACAATCCTAAACTGGATGATTTCACAACTA
CACTTATAGAACATGATTTCAGAGCTAAGAATATTACAAGCAGCAAACCATACAGAGCAC
ACTTTCTTACAGACTGTTCCAATAATAAATATATACACACAGATAAGACAATCCAAGCCA
CGCATGAGTTAAATCTCTTCTGTTATTTTCTTTGCTTACTTAAAACACCAAACGAACGAG
AAGCACACCAAAAGGACTGACGCCCTTCCAAAGATGAAACGGACACAGGTAAGAAAGCAT
TGGCATATATACCCTAGGTGAATGGCACAAGAGCTCACAGGGTACTCGGAAAGGCCGGTT
CTTCATTTTGGAGATCAGACAGGGTTGTTCGTTGTTGAGATCAGACCCAGTGCGGCGTCA
GAAAGCAGTGTGCCGTTTGCTAGTGAGCTCCACTAGTTGTGCCGTGGCCACTGCTGACCG
AGCCCCAGTTAGTTTCACCACCTCCCATCTGCACAGCGATGCTGTCCATTGACTCTGAGG
TCCCACTTCTGTGACCCCAGCTTGATCGTCTCGAATGCATACCAGCCCTGCCTTCCATGA
GCTCAACTGGAAGGGCTTCTCTGCTCAGATCTGGTGACGCATGGGTTATTCTGCCCTCTT
TCTCATCCAACATGCCCCCAACTTCTAAATCTCTTATATCAGCTCCTGAACGAGGTTCGT
CCCATGATACTGGCTTCCTGCCCAATTCAAGATCTCCAACAGGTTTGCCCATGTTTGGGC
TCATGAAACCCCTGGTTGGCGGGCGTGATTGCTGTAAACTTTGCTCTACTGGGACCCTTG
CTCGGAAATTGTTCTTGGAAGCGGGGACGGCAGTGCAGAAGATCTCCAGAAAGTTATTCA
CCACACCTACGTTGTATGGGTTAGCCCGCCGATCGTACCGATACCTGAAGTTCTCGTAGG
TAGTCTGCAAAGGTGAAAGATTGGATGATTACCATGTTGCGACAAAATGCTCTAAATATA
AAATGTTTTAAAACAGGGGAAAGGGAAGCAACCTGGTTGGTGCTCATCAGGTAGAAATGG
AAGACAGAAAGACCACCAACAAACCACACACAAATAAAACAGTAGATGATCAGAACCATT
GACGCAGGTGTCTTCAACATTGCCCTCCAAATCGATGAATCTTCTGCGTCTCTGATCTTA
ATTATGTACACCCAGCAGAACCCAAATACGTAGAGGCAGAGTAATGTGGTCGAGAAGACA
AACATATAGAAGAAACGATAATTACGCTGCAGCAGAAAAGGTGGTAGTTAGCGCCGATCA
GTGATTAATAGTAGCAATAGAGATTTACTGTGCACATTCGGATAACAATAAAATATTAGA
CTGTGAGGCATTAAGATACTTACCAGTCCTATGCATTGACCAACCCAAGGACAGTGATGA
TCAAAACGCTCCACACAGTTGTTACAGATAGAACAGTGAGAGCAACGAGGTGGCCGATAC
AGCATGCAGGTGTCGCAGTACTTGACCTTTACGACGACTCCATTTACATAAACATCCTTT
GTCCGTGGTAAGCGCAATTGTTGTGGAGTCTGACCATTTCCAGTATCATTGTTCACATCA
TGGGCTTCAGGTTCGGGGGGGTGGGTGTTACGAGGCACTATACCAGGATCTCTACCAGAG
GTAAGAAGCAGCAGCGTCAAATCCTGGAAAATGGAAGGAACTGGGTTCAGGCAAGTGTGA
ACTCTACAACAGTGCATATTCATATGAACTGTGGTAAGAACAGAATAATCAGTTTTAAAC
TTTCATATCATCGCATCCACCCATCTACCATGTTCATCTTCATGGTTGCTGTATTAGCAA
TGACACATCTTTTCGAAAATAGACAAATACTGGGTTCCTTTCTATTAAAAAGATCCACAA
GAGAGATTAAGTGACAAGCATCGCCTTTGAAAGATCACACAAAATGTTTCACGGGCATTC
CAAATAAGACTACTGCTAAAACATATCCGAACTGCAGCTAATCAACGGAAAACACTAAAA
GAATTTAAGCTCTGAGGTCAGCTAGTTCAGGTAAAGTGAGCTAATACTACTGATCAACCT
TGATCTGACCTGAACAGAAATTCAACAAGATAGAAAGAACTGCAGCTCAACTATACTGTT
TGATTTTAAATTAGACAAATAGTTCAAAGGAATTTCAAAAGAATGTTGTAGCAATGCATA
GAATTTTTTTCGTACGGAGTTCAAAGGAATGAACCATTCAAAATTCTTTTGGATTGCTTT
TCTACACTGCAATTCCAAGGATTCCAAGCAATCGGTTAGAACTATTGGAAAATTCCCTCT
GTGCCTGACAACTATGACATGCACTCAGTATCTACAGAAAATTCCTGTGTTTTTCCTGTG
GTGCAACTAAACAACTTCTATTGCTGATTTTTTGTGTTTCCTATTCACGTGTAGGGTTCC
ACATCTTCACATGTCATGACATCCTATTCCTGTGCTTTTATCCTGCAAACCAAAGAGATC
CTATTCCTGTGCTTCTATCCTGCAAACCAAAGAGATCCGCTCATGGTACATGGTGTGGCT
TCCCCAATCATCATCTTCCAGAAAAGGGGAATGCCATGCAGCCATCAATCCCAACACTAT
TTGTAGGTCATTGCCCGGCACTAGATAAAATGCTGGAATTTTGAAAAACATGGAACACAG
CACCAAGAGATGCTCAGCTGAAAATAGTGAAATAGAAGATGGGGTGGAGATGGCGTACAC
AAGGAACCACTCTACTGTGAAAATAGTCATTATCAAATATGAAAATCCTCTTTAGTTTCA
CGCAT