Contig Data
morexGenes
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Map Locations of contig_52696 (6491 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52696

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67194 2 1299 bp MLOC_67194.1 Available Available LOC_Os02g17280.1, FRAME:-1, EVALUE:1e-126, 13102.m01928 protein gamma-secretase subunit APH-1B, putative, expressed
MLOC_67193 1 760 bp AK250007.1 Available Available None





CDS Structure of MLOC_67194






CDS Structure of MLOC_67193






Contig Sequence (6491 bp)

>contig_52696 6491 assembly3_WGSMorex_rbca.fasta
ATGGTACGTGCGCTGGCCTCTCGATCCTTTCGTCGATGCGATCGAATCCATACTCGAGCT
TTGTGAATCGTGTGGCTGATGATGACTCGGCAGGCCGGAAGGCTCCTCGGACAACTCCTC
GTCATGGGCGGCGCCGTCGTCGGCAGGGCCGTCGTGCAGGCCTACCGCCAGGCCATCGTC
AGTGAGTGCTCCTTTAATTTGCCCCCTACTCCGTAAAAATATCTAGGTCGGTCACAGCGT
CGATGCCAAAAAGATGCCTCTTTTTTACTCCTCCTGAACTTGTCGTGGCTGTCCAAAACT
TGAGTGCCGATGGAGGTGATGGTGACAGGATTTTCATTTCGGCTTGGCTTGATGGACGTA
GTCTGCACTCTGGAATGCTACACTGTTAGTTAAGATGTGAATGAATGGTGCAAAAAAGTT
TCTTGTCTTCCACTTTACTGGTGTTTCTTCTTGTCATCTATTATTATGATTATCATTTAG
ATTGAAGGATGCACACAGGGAATTCTATCTATCATTTGATTAAAATGAATGAAAACCCGT
TCCGTCTTTTTGTTCCATAAGGCCCTGTTTGGAACTGTTTCTTGTGAAATTTCTCCACAG
TTGTAGTCAACTTCATGCATTCCACACAACTCCCAAGTCTTTAGATCGGCTCTTTGTTTG
CCTACCTATGGCATTCACTAGTTTAGGATCTCGTTGGAAATTTTTGTCAATACTCATATG
GGATGTATTATTGACCTTATCCTGCACAGGACGCACTCCTGATGTGATTATAAAAGCTAA
CTTGGAGAGCCCTTCTTCCTTTGGTTGCTTATTATAGATGCATAGAGATGCACAGCGAAC
AATTCAATTTTCTGGATGCAACTAATAATTCCTGATTTGTCTTATAGATGCACAGCGAAC
CGGAGCTGCCCAGGAAGCTGTCAACGGTATTCGAAGGGCTAGCAAGGCCATGACCGAGCA
AGAAGCCCGGCAAATATTGGGTATCAGTGAAAAGACGAGTTGGGAAGAGATCGTGCAGGT
GTGAAAATATAAGCCCACTTCTCTTGATATCTTCTAGCTCCCATCATTGATATTCACATG
AACCAAGGTTTTTTCTACATGGGTTTGTTTCATCAGATTAAGAGTATCGAAGCACACATA
CACTAGTTTGCTTCAGCGTAATACTGATGTTAAATTGCATGAATATTGAACAATGCGAAC
ATCATGTACACAGTCATTTTATTGCTCTGTATCAACATCTCATAGTTATGATTGTGGGGG
GCACATTTATATCCATTTGCTTTAGACACACAAACTGCTGCTCAGATTTCCCCTTCTGAA
TATTTTGCAGAAGTATGATACGATGTTTGAGAAGAACGCCAAGAGCGGAAGCTTCTATCT
GCAGTCAAAAGTCCACCGAGCGAAAGAATGTCTGGAATCCATATACCATGATAAGCCGGA
CATAATGAACTGAGATGGCCTGCGTTTCATCTAACCGATCGATTTGGTCAATGTGACCAG
AGGTCACCATACCATACTGAGTTCTGCTGGGCGACATCAGGTCAAATTTGGTTGTAACAG
GGAGTTTGATCCACTTTGACTCGAATAATATATATTCAACAAAAGGAACACCGTTTGATT
TGTTTTTTTCCAGAGGCGATGCCTCGTTTCCATGCGAATTTAGATGTTGACCCCTTTGTG
TTGTTGCGATCATCGATAATGTTTGATTGTTGTAGCAGCTTGTGATTGGAACCTGATTTC
CCTTGTTGCTAGCATTCACCCATAATTTTAAACCGTGATTATGGGGGCAGTTGATATACC
GAGACATGAACTTATGCCGCTGAAAGTATGCTGGCTGGAAAATGTAATCTTTGATGTTGG
TATTATTCCGAAGATGTAATCTCTATGCTCTCAAGTACTGGATTGCTGCTGGCTGGATTT
ATCATAACAGGAAGTTTGTTGTTATAATTGTATGGTTTCGCTCCCCCGAAAAAAGGAATA
ATTATAAAGTATTATTCAACAAAAGAAACACCGTTTGATTTGTTTCCAGTGGCAGTGACT
TGTTTCCCTTGCAAATTCACAAGTTGGAAACTTGGGTATGTATGCTGGTGGTTGATGTAA
TCTACTCCCTCCGTTCCAAAAATCTTGTCTTAAATTTGTCTAGAAAAATCTTGTGTTAAA
TTTGTCTAGAAATGGATGTATGTAAATACTGAAACGTGACTAGATACATTCAAAAATTTT
ATCTTAAGTTTGTTTAGAAATGGGTATGTAAATACTGAAACGTGACTAGATACATTCATA
TATAGACAAATTTAAGACAAGAATTTTGGGACGGAGGGGATACAACATCGATACGACTCA
AACGATGCAAGCAATTTCTGTCTCTAGGTTGCACCAAGTGGTTCTTGGCTACCTACTAGA
GGGTAGACTTGTAGTGTTTAGAAATCAGTAACAGGAAGTTTCAACACATGCATGTTACTC
TTTTAAACCTACTGGAATTCTCTCAGCAATTCCCATTCACCACTCGCCGCTCTTCTTCTG
ATGGGCTTTCTCAACAGAAAAAAAAAGAGCATCTGCAACACCACTAAACTACATATACTG
CAAGAAAAGAAAAAAAAACACGATATTCAAAGCAAGGAGATTATGAACAAGTACTCTTTT
GTGATGATGAAGAGATTACTAACTATTTAACAGAGCATCGATCAGACGCATTCTTGTGGC
TATCCAGATAGCACTGAAAACATCTCATTACAAGTGCCATGTACTACCTCCCATCATAAG
GGCATCAGATTCTCGCGGCCACCGTTCTACACGGTCGGGCCTTCATAAGATGACAAGTCC
ACTAGCGAGTGGCAAGACCACCAGATCTACATACAGCTGTCCTAGTACAAGGATTAGCCC
ACAAGGAAACTCCATTCAATGCTGTTAAGACTGTCGATGTTGCTGCTCGGTTATTCTCTG
CCCTACCACTCGCCAGGAGTGGTACAAGGTCATCGCAGCTGTCACACACAGTAAAGGTGT
ACCGATGAGGCAACCCCCTGGCACAAGGTTGATTAACGTCTGAAACAAACATATTGCAAA
ATCAGTGGTGTATACGACATAGTTTGAATCATGCACTTACCGTCTAAAATAGCAACAAGT
ATGACACCAACATTTCCATGCAGTAACTACTTGATAACAAAAGTACTTGGTTGCAGCATA
AAAGACATTGCTGCCTAGCCTAACTCAGTCATATGATATAGACGGGAAAAAATGATGCCA
CAAAAATTGTAATAGTGCAAATATGAAAATGTTTTTAACTATTCAGTCATCTGTTCATGA
ACATAAATCTGATCAAGCATTGTCAGGTCCGTTGTTAAGGGGCAGCGAGGCACTTCATCA
TCCAGCAAAAACAATTTAAGACCTAGTTCTTACCATTACAGCAGCAATCAGGTGAACCAC
TGGGACAAAAATTTGGTCTCTCTTCTTTCTCTCTCCATATCCATTAAAAGCAATAATCAT
CGAGGAAGTATGGATGACCAAGAATCCAAGTGAAATAATTGCTGCCAAAAAGCACATAAG
GTTTAGCCAAGAAGAACAAAATCAGGAAAATAAGATTTGGCTTGCAATACAACCAGGATC
TTGGAGAAACAAACTATGCTGGCAAGATAACATAAACTGCGCTACAACCAACAGAGTAGT
CTCAGAAATTTTGTTCGGCAGCAATCTAATTCGAAGGAAGCTTCGTCACCTCCTTGCTGA
CTCATATTAGGGAGTGAAGAAAATGTGGACATACCTGACACAAGGAAAAATGGCATCCTT
GAGCACCTTTCGACATAAAATGTTGCTCGACCAAATGCTGGGGTTAGGAGGCTGAGGCAG
AAAAAGACTGCATGAGCCAGTCCATGACCTAAACCACCAGCTGCACCAACATATCAAAAC
AGAAATGAGCAAACAATAGCAGTTATAACTTGTGACATCCTTTGAGGTAACAAAGAACTG
ATGCTCCCATCGAGCAATAATTGAACGCACATCCTTGGATTCAGATTCACTCGAGTTAAT
AATGTGGCATGTAGTTCCGGATCAAATTACAGAGAGCCATATATAAGCTGTGCTTTGCTC
TATCATAACTACAGTAACTATTAACCTATGTGAGTACCGATTGCTAGAGTTGGAACGAAT
AATAATCAGCAGAAAATCCCCCAATTATGATATGCACATGATTCATTTGAAGAAATAAAA
AGATGGTAATGATAACTGCAGGTGTCTATTTCCAATTCAAATCCTTGTATAAACACCAGC
CAGCGGTATATGAAGACTTTATGTCAAATGATAGATGAAGAAACATTTGGCCTTCCTTGA
CCAAAGAACATTTTTATGTAGCACCGCAACAACTTACCCAACGAGATTAGCATCTTGTCT
GTCAAAGAGAGACGTGGTTTAGATATTCTGTCGGCAAAGGCATCTAGCATCTCTTCCATT
TTCCTGGGAAAAACAGTTATCAGGATATATCACCATGAAAGCAATCAAACTACATACTCT
ATACCTACGGCATTCTGCACATGAGAAGATAAGTTGAGAGATAACTTCAACATTTTATAT
GGTTCACCTACTTGTAAAGCCTCCAGAAGACAAGACGGATGCCTTCTTGAAATGCAACAG
ATGTAAGGATCAAAATCACATATGGCCACCACAGTCCTGATTTTAGAGGTAGAAACCCCC
TCCATATTCCCGAGAGGACAATCAAACTTATAAGCCAAAACAACGTGCTGCACAAATAAA
GTTTTGGCCAAAAGTTAATGCTGAAATCATGATACTGTATTTCCAATGAAACATATTTCC
AATCTAGAAAGGCCATTGATATGCTCTGATTCTACCATTGTGTCATACCAACCAGTTCAA
AAGAACAAAAAATATATCACTGTATATCACAGACATAGCCATAGGTTTCTCACTGAAGAA
GAATGTTAACCAGTTTGCAACACCAGCATGTACCAAATCTTTGTGAATTCTACATCCAAA
AACGAAGGGCACAACGAAATAACGTGAATCAACTGCAGATGGTCAGGTTAATATTTTTTA
AAGGTGGCACTGCATGATCTGCATATCTTTGGAAGACAAATACACATGGTTCACACAGGA
ACTGAAACAATGATGACAGTTACAGCACAAAGTCAGTCTCCTGTCCATAGCAGTGCTAAT
ATCCAGTATAACCGATACACTCATAGGCCCATAGCCATACACGATGGAAAAGATAGCTGA
ATTAATCTCTGACACTTAATCCCACCGAAGAGCACATGGATTCAGTCCACACAGAGGTAC
AGTTAGCACACACTAGATTTTGTTTCAACTAAAATCACCTAGTACATTTTTGAAGGATTT
TATACAGTTCACACAGCCTGCAACGCAGTTAACAAGATTACTCATCGACTCCTAAATCTC
CTGCAGTTTCTGAAGTAGCAGGTGAGGTCCAAACGACATAGCGCACCAGCACAGACACAG
GGTATGGATATGACGATGAGAATTGATAAATGCGAACAGCAAATTCATCTCTCAGGATAA
CAATGCAAGTTAAATCCTAGGAGTGGGTTTGGCAAGCTCAGTCCAACCCCAACCCAACCA
GATCCACCGTCTGTCTGCGCACATACCAAGAGTGGTTCCAATCCAAACCCTCCGCTCCAC
GAAACTAAAACTTGTCTGGAACTACCGTCGGCATAGGAGGATGGATCTCACGAAGCCGCA
GGCACCAAACAAGGCTAACCCTAGCACGAGGAGGGACCGGATCCACGAGCCCGCGCGGGC
ACAATCCGAGCGAGCCCCATGGCCGTACTCAAGCACCGCGTTCCCCGGGATTCGATGGAA
GCAAACGCAGCAGATGGGGAGGTTGGGGTGGGGGAGAGGGGAGGGAAGCGACCTGGAGAG
GAGGGTGAGGACGAGGAAGGGCTTCCTGGCGATGACGCCGGCGAAGAGGGAGAAGGCGGG
GCCCAGCGCGATGAGGGCATACCCCACCCCCGCCGCCACCGTCATCGCGGAGGCCGGTCT
CCCCTCGCCGCCGCGGAAGCCGCCGCCTTGGTCGGGCCGGCGACGGAAGGGGACGGCGGA
GTGGAACGACGAACGCGGTGTGAGGGGGGCCGACGTTTGTACCCACGACTTTTCTTGCAA
ACAGGCCGTAGATTACGAGAGTAAAGAGTCCCAACTCGTTGCATTAGGTTACTCAGGGCA
TGTACACCGGTTAGCCCCGACCAATGCTACAAGTACGGGAGTTTTATAGGAGTTTTACAT
GTTGATATGAGGTGGAATGTATTGATTGATAAATAAGATGAAGCGGACCCACCCCAAAAA
TCAGGGAGAAAGATTAGTGAGGAGAAAGACTAATCCGTTAAATCTTGTAAAAAGTTCCCG
TAAATCTAGCATTTTTGGGTTAGCCCCTCGGATGCCATGGTGACAGTAAAGCTATAGCCT
GTAGACAAGATATGACTCTTTTTTTTGCCGGAAAAACTTTCATTTTATTCATCTTTAATC
ATGGTAGTATA