Contig Data
morexGenes
Links



Map Locations of contig_52645 (4279 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_52645

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67158 1 405 bp AK369002 Available Available None





CDS Structure of MLOC_67158






Contig Sequence (4279 bp)

>contig_52645 4279 assembly3_WGSMorex_rbca.fasta
ACGAAGCTGGAGAAGTTGGCGTGCTTGAAGTGCGCCGGCAGCAGCATCTCCGAGAAGGCG
AAGGGGTCGGCGACGACGAAGCTGTTGCTGGCCGGCCCCCACGCGACCACGGCGTCCGTC
GCCGGGTCGTCCACCATGCCGTACGTCTTGGCCACGAACGGCGCCACCATGCCGCCGCCG
GCGCTGCTCATCTTAATTTCACTCCAAGCAAAAGGAAAGCACGGTGGCGAGAATGACTTG
TAATGTGATGGAGCAGCTGGCCAGCAAAGTGAAAGGGAAACGCTGATGTCCTGCGTACTG
GTGGTGGTGACAGTGGGAGCCGAGTTATATATATAAATGGGATACGGCAGGCACAGGGAG
GCGGCCGTATCTGTGGACGCGTGTGAGCGCTGCGTGGCGACCCCTCACGAGGCGAGGAAG
ATCGATCTTGATACGTGTCCCTCACTAACATTGAATCATCCGGCTGTCAAGTATCAGCAT
CCTTACATTTAATCGAAAGCCGCCCTGTCAACATCTGCATACGTGAGTTAACTACTACCA
AATGTAGAGCGTAGTGTGACCCTCGAGCTCGACGGGCCCAAATACGTGCCACTTCCGTCT
TGGGTGAGCAAAGATATTAGACGGAAACCCGATCTTGGACCTCGATTGTCGCGTTCGCGT
TCATCTATTGGGGCGTGGGTGACACTCCTTCTGCAAAACAAAGCGGCAACAATTGCTTTC
CGTTTCTTTAATATAGAAGATGTTCTCTAAACTATTTTAGCGAGTAAAGAAAGGATCTAA
CGTGTGGACAGGGGACGAACACCCCGTCAGGGAAAAGGGGTTGATGCATTCAAAAATCAA
AATGGAGCGGTTCGGCCCCTCCCCAGCTGATTGGTCCAAAATTTGTCGCGTGCCGGAGAT
ATGCCTGAGACCGACCTGCGACCACGCACGCATCCGCCATCGGGTCTAGTACGTGGCGAC
CAACTGCGCCCTGGTGCTCCATGCTAATTCCAAGCGTATCGTCCACGTTGTCGTTTGTAT
TATTGTATGTATATATTGTCATACCATCTATAGCATTACAGCTAAAACTTACAAATTCGA
TCCCTTAAAACTGATTCGTCAGCCTTTATTATTGACCATTTTCCTCTCTTCCTTTCGCAG
CTGGAAGCCTAGCCGCCGTTAGGAGAGGATAATCTTCCAGCACTGTCCTTGAACGATCTC
GATAGTCGGTGATGAGGAGGGTCGTCAGATCCATGTGTGTGGATCATTTTTAGTTCTTAC
AGTTTAGGTTTTTAGTTGTTCATTGTCTTGGCTGTATACAGATTTTATCTAAATTTTTAG
GCGGGTTTTAGAGATTCAGGTATAAATGCTTTAATTTTGATAAATTCGGTCACATACGCC
TGCGCAGCGTCCGATTGCGTTTGCGTCGGTAGTACCTTATACTTAATGATATGCATCCAA
ATAACTCATTTTACATTTCCTTAATTCTTTATTTTTAAATAGCCATAACCCACTAGCTAA
TTTTTCTCTCCATATAACAATGCCGCATCATCAAGTCATGCATGGAGTCATAAGTTATTT
TTTCATTAATCTTTTTACGATGCCACATCATCATGTCATGCACGGGGCTCAACTCATGTT
TCAAGTCCCTGATTCAACCCGCTAATTCCGTTTGAAGGTTTGTGCAGCAATATGAAATGT
GTCAAGAAACTATGCTTGATCATGAGGACAATGTTGGATTCACTAGTGAAACAATAGCTC
TGTCGCTATACTCTCAATACACATACTTTTGAGCTTTACCAAAAAAATCAAAACAAAAAT
AAATGTTGATTTTTTGGCCTAGTCTCTGTGTGATTTGGTTTATGACCTGTTTCTTCTGAT
GTTGCAGGTACAACATTGCAAGCCAAGCTGCTGCTTACTACACCCGCAACGTCTTTGATA
AGTCTCAGGAATAGGTGATTGCATCTACCGGCTTCATTATCAACCAAGACACTCACTACC
AAGGGCAAGGCCTCTTGTTTGAGCTAAAATCAAGCTCCTATGAGAACCCAAAGTTATATT
ATGTGTATGTTATGATGGATGAAGGGGTGTTCGAATGTAGCTGTCACTACTTTGAGATGA
ACGGGATGATTTGTGCACACATAATACGGGCAATGGTTCATCTCAATGTCCAAGTATTTC
CACATCAATACTTGTTGGATAGGTGGTATGAAGCAGCCACAACAAGCATGGGCAGGACAG
GACTAGTTGGTTGCAGGACTTCGGGCACCCCTTGACGAACATGCTGAAATACAACTCCTT
GTGTGGAAGGTTAACATGGTTGGCCTCTAATGCATGTTGCAATGATGGTGCCTACAGAAT
ATTAGCTGAAGCAATTAAACTTCTTGATCCTGCCATAGCAGCGGTGAGGAGAGGAGCACT
GCCAGATCAAGAAGCAACACAACAGACTGAACCCCCAACACCACCCGCTGTAGCAACGGT
AACATTGGATGATGACCTATGACAACATCAAAGTCAATTCGGGTATGCTACAAAACCCAG
CTCGTGTCCCTAAGGAAGGCCGACCAACTAATACACAGAAGAGAAAAAAGACGTCGGTAG
AGCAGCGAGATGATGAAGAAAAGAAGAAGGCAAAACAATAAGAGAAGAAGCCAACAACAT
CAGGAAAGCCAAGAGATGTGAAAAGGACTATTCGTTGCAAGCACCGCAACAAATTAGGTC
ACAACATTCAAACATGTGCCCGCCCCCTAAAATCTACAATGGAGGCGGCGACGGCACCCC
AAAATGTCAGTTCTACTATGGGGTTGGACATGCAGTCCCAGATTGTCGGTTCCACTCCGA
AACAACTCCGTCTCTTGTTCATCTAAGAGTTCTCCTTTGATTGTCTCTGTTTTCCTAGCA
TCCTCAGGCTCTAAGGTCATTTCTAATCGATCCCTTATAACCGGTTAGAGGAGTAAAAAT
GTGGTTGTACTCCTCTATCCAACACCTAGCCGATTCACAATCCATTGTAAGGAAGTATTT
TTTTCACTCTGGCCATAAAACCTCCTTATTAATTTAATCCACCGCGCAACAGCTGAGTAA
AAAACTCCACTCTCTCTTCCCTTCCTCTGTCTCTCCTCCTCCCCCGCCCTTGTCGTCGGT
GCCTACACCACCGTTTCCCGACGCCCCCCTCCAATCTCATGGCCAGACGCGGTGGCCGGA
TCGAGGTCCCCGCCGCTGATCCAGAGCCTCGATCCACGCCGACATGGGACCCGTGCAACC
TTCTTCGCCGGATCTTCCTCAGCCAGTCGTTGTCGCTCCTGTGTCGATGTCGTCGCCCCC
CTCTCTCTTTAGCTTCCCTGACGTCTCCGCGCATCGGCCACCGCAGAGGAGCTATCACGA
CATCCGACAAGGGGGTGGGGGTACTTGGGTGGCCGAGATTCGAGATAGGGAGACCGGCCA
ACGCCATCGCCTCAGCTCCTTTCACAAGACGAATTCGCCACGCTCGAGTACGACCGTTGG
GACGTCCGGATGCACGGCGTCAAGGTGTGCCCCAACTTCACATTTGGGGCGGCGCATGTC
CATCTTGAGCCGCCATTGCTGGGGATTGTATGTGCAGCGATGGCCAGGGAGGATCGGGCA
GCAAGGGAGTTACTCGTAGCGGAGGCACATGGCAGACATCCGCCGCGAGTACCCGCAATT
GGTGGACGCGGAGCGACATCGTTTCACCAATGAGGAGGTGGACGGGGCGGGCGTCGTCAT
GTCCGACGAGGAGGAAGGGGGGGGGACGAGGAGGAGATCGACGTCCAAGAATGTCGCTGC
ATCTACCCAACATCGCCGCCGACGGCATAGGGTTGGACCCCATGAGCGGTGGCATACGCG
GGCGGAATGGATAGAGCTATATAAGAAAGATTAGTTTAAACCGGAGTTGAATCTATGTCT
AGCTTATGTAGAATCTATGTCGAGTTTAAACCAAAGTTTAAATTAAGTAGCCATTATGTT
GAAATTCGGTTGTTTTAATCAAATCTATTTTGAATTTTATGCACATTTGGGTTTAACTAC
CTTATATACAAGGGGTCAGTTAGAAACGGTCAAAATTTAATGAAGTAAATATATTTAACT
AAGGTTTTACTTTATGAGATACTCCACTATTTTTAGGGGACAAATGGCCTAACAACAACA
AAAAATGGGATCCATTTTTAAACGGGAGAGATTTGTAAATCAAATCTGACTTCCCAAACC
CCTAAATCTCATTCACCATGGCTTCTGCCCAAGGGTCCTCCGCCGTCGGCTGTCGTCAGC
GGCGTGGAGCGCCTCGCTG