Contig Data
morexGenes
Links



Map Locations of contig_52641 (4377 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52641

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67155 1 873 bp AK371240 Available Available None





CDS Structure of MLOC_67155






Contig Sequence (4377 bp)

>contig_52641 4377 assembly3_WGSMorex_rbca.fasta
TTGTAACGATATCCATTCTTGTGAAAAGACGAGATGCGTTTCTATCCCTGTTGAGGCTCT
CGCGCCAAAATAAAAATAGGGACGCATATTGGGCATTACACGCGAGTTCCACAAGCCCGT
GCCCAGCCGTCCGCGTGCGCCCGTGCTCGCCACGCGAGCTCTCCGCGCGAGGCCATCCTC
GCCTCGCTGCACGACTCCCCGCGCCAGGCCGTTCCTCGCCTCGCCGCGGCCGAGAGCTCC
TCGCGCCAGGACGTCCTCGCCTCGTCACGGCCACAAGCTCCTGACGTCCTCCCCTTCTTG
CCCCACCCCACTCTGGCCTTGCAGCGCTGCTGTGCAGAACGACATGCGCGTGCCCACGCC
GGTGTCAGGCACAGAGGAGGGAAGAGATGGGAGTGGGGTGGGCGAACGAATGAAAAAAGG
GAGGAAGGTGGGTGTGTGGGTGACAGGCGGGCTAGGTCCGGACACAAACGGACGAGGCGG
GTGTAAAAAATGTCCATTTTATGTCTCCGTGTGATCAAATGTGATCTAAATTTGGTTCCG
AAATTGGTCTGAACGAACACAGACCGGACGCAAAATAAAAACGAATCTCTGCGTTGGGTA
ATTATTTTTGTCCACACAAACTTAAATAAACATGAGCGGATGAAATTGGTCTCCGTGTTG
GATTGCTCCTAGGAAGCAACTTTACTTTGGTATATTCCAAAGTGTTTCGGCATCTCGGCT
GCCTTTCTCCCGTAGTCCCGTGCCCGCGCAATTCTAGTTGAGAAACCATCGGCGAGGAGG
GCTTCTCACCCGCGAGACAGCTGTTCCCACTAACTAGCGTTCACATTCTTGCTTGCAACG
TCGTAGTACACCATACCGGCACCGGTACCGGTGCACTCCTTTCTGCGTGGCGCCTGAGCA
GCCCTCCCTTGTCGTCAAAGGTGCCGGTGGTGTCACGGGGCGTCGCGAGCGCACGCACCA
TGTCGCTGGCCGGCTGTGTCTTCTTCGCCGTGCCCGTGGAGGACTTGTAACCGATTTTGG
TTGGCCGGCGCAGGTTTTGTTTGGTGTTGCCTGCCGTATGTGGAGACCAGCACAACGTTC
CTCAACCTTATTTTCCGTTGCTTTCGACGCCTTGTTTTCAACAACCAGTAGTAGTACAAT
GAAAGGACGCTAGTTTTCAACGCTTACGATGTTCGTTTGATCTGCAATAGATCGATCAGA
GCAATGTACGCACAGTACGCTGGTTGGGAAGGCGGCATCTTCCTAAGCTAAGGGCCTGTT
CGGTAACCCACTAGCTCCACGAAATATTCAGAATCTGTGAAGCATTCAATCCCTTGTTCT
GTAAATTTGAACTGCAGCCTGCTTCGCTCCACTCCGGTCCGCTCCGAAGCAGAGTTGTGG
AGCGGAGGGACTCTGAACAGACACTAGGTTCCGAGCAATATTTTACACAAATAATCTGAG
CTCTCTTGCCCATTATTTTTTGTGTCTCCATAAAAAAGTGCTCCTAAGAATGAGGCAATT
ACTGGCCCAACGGATATACTCTATTTTGTTTCTCTCGCACGGCTCAGCAAAATTGACATC
ACATACACCTTCAATCGACCTGATATGAACCGGTTCATGCATGCAATGCCTACAGCCCTG
CATGACGATTAGTTAGGTGTGTTATTGGTTGCTGTCATCACATGCAATGCCTACAGCTCA
TGCTAGTTCCGATCAAGCTTTCCTACCAAGTCATCGACGAGATCTGATAGATGGGCGAGA
AACGCAAGGTCTCACGTACCACGCTCGTAAACCCTCGTAGCACCCGTCAGATCAATTTTT
GTGCGAGCCAGAGTCGTGCCTGGCCGGCTCAACTAAACAAGCGGCCAGTCCAAAACGCCG
GCCTTCTATGATGTGCTGCCCATTTCTGCCACCTTTTCCCGCGCGCGGACGGGCCTCGCA
AGCTTGCAACGGACAGCGCAGGGCGTGGTTGACCTGCATGCACGCGGGTGTCAACTGCCA
AGCCACGGGCGTGGGACGCCCGCCGTCCACGCCCGCCCGTGCGCGCGCCGCGCCTGCCAA
CTGCCCGTTCGAACACACACTGGCACACGTACTACTGCAGGGTCTCCTGACACCGGCCGG
CCACACGGGCCACAAAGTTATGGCCGCCTGAGCTGCATTCCTCGTGATGAACTAACCAAA
GCCCTCCGTCTGATATTTCCTATGGCGCGCGGGTCCCGGCCGGCGCTATAAATTACCTAG
CGAGCTCAGACATTCGATTCGACCAAAGAAAGCAGGGCAACGCAACGCAGCCACATCACC
ACCGCCGCGCACAGAGCTTCCTAGCTTTCGATCTCGAGGTGGACGTTCATGGAGACGATG
GTGGCGAATGGCGGCGGGGAGGGTCGGGCGGCGGCGAGGTACGGGGACAGGGAGCAGCAG
GGCGCGGGATGCGGGGGTGCGCGCCGCTTCCAGATGCCGCTGCACTACCCGAGGTACACC
AGGGAGAACTACGAGGCCATGCCCGAGTGGCAGCTCGACCGCCTCCTCTCTGACTACGGC
CTCCCCGTCCACGGCAGCGTCCACCACAAGCGCAGCTTCGCCATGGGCGCCTTCCTCTGG
GGCGCTGGCAACTGATCTGCCTGTCGGCCGTGCGCCTAATCTTCTCCCTCGACCATGGAG
CAGCTCATGACTCACGTACGGTCGGTGGGCCGAGAGATGATGTGCGTGCTACTGTATTAT
CCGTATATGCAAAGATCGATTAGCTAGCTAGCTACGATGTTTTTTTTTTCGATATCGTTT
CCATTTGCGTGCTATGACATGGCCTACGTACATGTCTGTATGATAATTTGGACGCGTTGA
TCTTTTGAATTTCAAGTACTACTAGCTAGCTAATTATGACTGATGTGTGGAACTGGATTG
AGTATGTCTTAATGTATAGTTAATTTATGCCCTACGTGTATAATATTGCTCTGTGTATAG
TTAGTTGTGTTTGAAAGTGCAGCATAACATCCGTGTGATCTATCTAAACTAGCATTCATT
CTAATCTCGTGGTGCCTGAATAAGAGCATCTCCAATTAGATTCCCTACTCTCCTCATATG
TCCAGGTGGACAGCCAGGACAGGCCTCGGCAGAAAAAGGCCACCTTACCGGACCCCAAAT
TCAACCCAAATGTATGGGCTGTCCGACACACCTAAAACAAAGCTCATATGCGGAGCATGT
TAAAATAATTCGAGACACATGTCGATCTTCAAAGCGGCAGTGCTCGCATCAGAGGTCGTA
CTAGGTTTCCAGCACATGTGAGGAAGTTTTTTTCGCCCAAAGAAAAGGGTTTTGGAACAA
AAGGGAAGATGGGCTACGTAGGAGTTGTTACGCTCGTACTGCAGATCGTATTGCATCTCC
AGAATGTTGCCTACGCTCCAGAGGAGAAGGTGGCTGTTGAGTGCATAATTTGGAGCTAGA
TATTCGGCTTGGTTGTAGTCTGGTGCAAATGTCCAGCGACAGAATAAAGGAAAAAAACCT
AATCTACACACGCCATATCGAGGTTTACCGGTGCGGCGGCTGAGCAGCAAAAGAAACCGA
ATCTTTTTCTCATGCATGCATGATGTCATCAAATTCATTCTAAATTATCAAAATTCAAAA
AGTTTTATCTTTTAAACCATTAGTTCGATCGATGATCCGTTTTCGTCTTTGACTTTGTTT
CGACGAAATCTTTAAAACTAGATCCCATGTCGATATGTTTCGACAACTTTTTTGTTTCTC
GTACTTACCACATTTGTTGTACGTATTTGTCATATTATAAGTACTTACTTGTCTGATAAA
AAATAACTTAACCGTCGTATTTTTTAAAAATTGCGTATAAATATGACATCTCGACATAAT
CGAACGAGCAAGCACAAACAACATTTTTAGGACGATAACGTGTAAAAATTTGATAATTCA
GCATATTTAAAACCGATGACCACAAGAAATCGTTTTTTTATATAATTGTTAGTAAATATG
ACAAGTCGGCATAGTTAAACTAGCAAGCACAAAAAATATGGCGAGTTTTTTTTATGATCA
AACACAATTAAATATGATCGCCAAAAATCTATACATACAGTTGCCAAGTTGACAACTAAA
TTAATTAAATATGGCTACTAAGTGTCTCATAATCTAACAACTAAATAATAGTAATACCTA
TCGATGAAAAAAAAAGATGTGGAAACATGTCGACATGGGATCTAGTTTTGAAGATCTCGT
TACGAGAAAGCTAACGGTGAAAAAGGATCGTCAATTGGATTTATAGTTCAAGAGATAAAA
CTTTTTAAAAATTCAACATTAAAAAAATCTATGCTAATGTCACGGTGATGGATTACCTTG
CATGCATGGTGGTAAACCGCCGCATGGGGCTATGTAGTGCCCCCCCCCCCCCCCCCC