Map Locations of contig_52615 (10728 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52615

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67140 5 2087 bp AK374729 Available Available None
MLOC_67139 2 3137 bp MLOC_67139.1 Available Available LOC_Os01g53610.1, FRAME:+2, EVALUE:0.0, 13101.m05615 protein selenium-binding protein, related, putative, expressed





CDS Structure of MLOC_67140






CDS Structure of MLOC_67139






Contig Sequence (10728 bp)

>contig_52615 10728 assembly3_WGSMorex_rbca.fasta
ATTAGTCTAGGAGTCCTCATTAGTCTATGTTTACTTTCCTTGCACCTCAAGTCATGTGTA
ATATATATATGCCCTTTGGGCCTTCAATAAACATAAGTTGCATATTCCTAACACCACCAG
GCAAACATGGTGACCAAATGACACTAGTGCAGTAATACACATTAATAATGAACATACAAA
TATACAAAAATTTGAAAACAACAATAATCACACCATATTGAATTGCCGAACCCCAACTCA
TCACAATTCCAAAAGAGAAAGTTTATCTTTCTTCACTGTGTTACAGTTTATAAAGTCAGC
AAACAAGAGATATAAGCATGGTATTTAATGTACATATAACAGGGAATCTCAGTCAACTAA
TTATTTCACCAGATATTTGAAGCAGAAATATGTTACTAATAATAAAGAAAAGCACATTGG
TCTCACAAGATAATTTTCAATAAGTACTGAGCATAAGATAGTTACCAATAGGAGATTTTT
CTGAAGCCAACCCAGATGAGCTGGTCCCACAAGCATCATCTACTGAGGATAATTTGCTGG
AGTACGATGGTTTAGATTGTTCAGCAACAACTGTCATCAGCTTTTGTGCTAAAGCAATAG
CAGCTCCCTGGACATACACAAGACATCGGTCATATATGGAGCAGAACATGTGGCTAAAAA
TGAAATATGATAGCTGTATTTTACCTGCCAAAAGGAGTAGCAACCATCAACCAATTTATT
TGTCCGTCCTTGGAATCCACATTCCACTCCTTGACGAAATGCCACCCAGCCCTAAACGGT
GAGGACCTAGTTAGTGTTGCAACAAACAATGATGTAACAACAAATTACATATGTGGCTGC
AAAGCAAAAGTTCATATATTTCCTAGAAAAAGGTCCACTTTTCAATCTAGAACTTCCGCA
AAAGTGCACTTCCAACTCCAAGCTCCTGCAAAAGTAACCTCCCAACTTTGAACTCTAAAA
TCGTCTTGAGTTGCAACCATGAAATAGCAAAATGGCCTGTTTTACAACCTTGGTTGGTTT
GACAACTGGCTTTGGCTGATGTGGATATCATGCCATTGTCACAACATCAAACAAACCAGT
CCCGTGCCATATCTCTCCCTCAGTTTTCTCTTTCTTCTCCCTCTTTACTGTTTCATGGAA
ATTAAGAGATTTTTGATACTTGCAAAACCACCCAAGGTTGTGAAATGGACAGTTCCGGTC
GTATGTTTTGGTTGTTAGACTTGTCTGCTGACATGGTAGTAACGCAGTGAACACATGGCA
TCCACAGCAGTCAAAAATACTTGGAAAACCACCCAAGGTTGTGAAAAGTGGACAGTTTCA
GTTGTTACGTGTTGCAACTAGGACAATTTTAGAGTCAGTTGAGGGTTGACAAGTTGACCT
TTTTCTATTCCGAACAATACAACAAACAGATTTTAAAATAAAAATCCGATACGTTTCTCC
TTTACATAATTGAAGACCAAAGGGCCAAGTTCAACTAATTGCAAGCAAATTAGGACAACA
CATACACACACAGAGAACAACAGAAGGAAAACTGAACGAGGTAAGAGGAGGAATCTTACA
ATCAAGCTAGGCAAATCGAGTTTCTCCACTTCATTAAGCAGGACCATTGCAGCCAGGCCA
CAAAAAGTGTACCTTGTCAAAGCAAATTTTATTTGAACTTCTTAACAGATACATTCAGAA
AATCATCAGAGACCATCTTTAGAAACGTACCCACCATGAGCTTCAGCAGAAGGCTCCCCC
GCAATCCCACCTTCATAAGTTTGACAACTGGGGCATGCAGTGTATGAATCAACTGATCAT
TCTATAGAAAAAAATAACTGAACAAACCAACCAGATATTTTGCAATTGCAAAACTGAAAA
TCACATTAAGCAAAGCAAACCTTGCTATGTAGTTCCCAACACCTCTTGCCAGTTTATCAT
CAAGAACGTTCACGAGGCTGGCGACCTAAATCTCAACAAGCAAAATATTAGAAAACGGCA
ACATTAACATTATGAACTACAAGAAACTCACCGATATTGCAGTATAGCAAGCACGGACAT
CAACTTCACCACCATCATGCATTCTGGTTGAAAGATTTTTGATGGATTAACAGACATTAG
TTGGACGGAACTTGGTATGGAAATAGTATTTTCCTTGCCCTATGCACTATCGAGAAAACG
CACACCTGAAAGCACCTGATTTGTCCTTCATTAGAAGCATAAACTTGTACAGATTTTCCC
TGATTGACAACTTAGAACTGTTAAGAAAACAACACAGATATAAATAACATCTTCCCAAGA
GCAGACATAAGAGTTACCTTTTTATTGATGATAGTGCTTTTTCACTCCCTATGGTTACAA
GTGTATTTACAGCAGCATACGATGTAGCGAGATGAGGTAACTATCAAAGAAAAGGTGAGC
AAAAGGATGAAACAAAAAAACTGGCCAGTGGAAATTATCATCTTGAATGAGTAAATAAAC
ATGAATCCGAATCGGTAGAGAAAGATGAATGCTATCTCTGAACTTCCAAAAGATGGACAA
ACAAAACCACTACAAAAGCTAGCTTTGCCGACTACAGCAGATTTCTTGAGTTATATGAAC
ACACAGATATATATTTCATATAAACCTATCTCTGAAGCTCTTATCACTAAAATGGTCTGT
CGAAGGTATTTTGTCTATTCATGCGAACATGTCAAGTAGCCTAGAACGGTCTAAGCACTC
ATTTTGAAGCAAACATTTGAAAGTAACGTCAGATCCAATAACACTACAGTCCAGCATTCC
AATGACCTGTTCCAAATTCCATGGTTGCCTAAAATTGTATTTCAAAAACTAATACAAAAG
ATTAACCAACCTAAAGCTATTACCGAAGCTAAATGTGGGGAATTAAAAAAAGTTTGAGGT
TAGAGCAAACCTGCCCAGGTCCACCACCATATCCACCATGTTTGTCCTGAAACAATTATA
ATTAAGCCATCATAAGAGACAAAATGGTAATATTAAGAAATTAGTGTATCTGCAAAAGGG
TATCTTCAGTGCTTTAATTATGACCAATACTACTTGTATTTTTCAGTATAAAAAATTATA
TTGCTGCAAAAGCTTCTAAGGGACAACCTAACCATAGAACAAAGTAAAATAAAGGTTATT
TTCTTGTCCATCCTTGTAGGAAGCAATGTTGTTCAACTGAAGCATGAGTGCTATATAATT
TATCAGATTTAAGATTTATTGTATTCTGCAACCAGAGTATATTGTCTGAGCAACTTATTT
ATTAGTTTTTAGTATGTATATATGCAGAATGACACATGGATTGAGAGATTTATTCATCTA
GCCCCACCACCTTAAGCAGTTTGGCAAAGCTGTTCCATTCAATCTTGTTTCTCATATCAG
CAAAGAAGAGAGGAAGTTTGAAACAAAGCCTTAAACAGTCTGATTGTAAAGTTTTCAACT
TATATATCCTTAAGCACAAGTGTTATAAAAAATTAGCTGCAAACCAAAGAACAATATCCA
TACAATTATATCATAACAGATCAACAAACCTGGCATCGAGACAAGAAGTCCACAATATCG
TTCTCGAGGTCATCGTCAAGCGTTTCATCCAGCAATGCAAGCCCATGAACCATCCAATAG
CATAACCAAGGTCGGCTGGAATAACCAGAAGAAATTGTAAGCAAAATATAAACCAGGGAC
GGCACTTGAGTTAATTCAACACTAGAGAAGTAATACTTGGCATCGAGCACATGGAAGCTA
GGTGCAAGATGCCTCAGCCCTTTCGTCAAATACTCGACATGCTGATCGCGCCAGAGCTCC
AGCCTGCAGCAAAAAAAATAAAAAAAATCAAAGCTCGGTATACGTAAGGTGAGAACATCA
TAGTCTCAAGTCAGTTCCTGTCAGAATTAAAGGGCCACTTATACAACACCTATTTGGCAG
CAGTTATGCTTCTTAACTTATGAGCAAAAAATTCGGTACCACACTCAAGCAATTCCTCCC
CCCATCTGCTACATACGTGGATTTATCAGCGAGCTTCCAGCTCCGAGCAGAAGTCAAGCA
AGCCTATCTGATCTCCGCACCAACCAAGCCCTGAAGCCCATCTCTCGCACCCAAGCCCGT
GCCACTCCCCTCCCAAACACCGCGAACAGCGGGCTAGTAGCTAAAGAGAAGTACTGATAT
GGAGAGTGCTTGAGGAGGGGCCCTTACACGGCGGACTTGGCGTTGGGCGCGGCGTCGAAG
AGGACGCGGTAGATGTCGGCTACCCGCGCCTCCACCTTCATCTGCTCCACCTGCGTCACG
GTGAGCCGGGGCAGCTCCGCGGCCGATTCGTCCTCCGACGGGTCTCCCCCGGCGGGAGGC
GGCTGCGGCTGCGTCCGCGACGAGGAATCCATAGGCGCGGCGGAGGCGGGCGGAGGCTGG
CCGTCGCTCGGCTGCGTGCCGCGGCTGCGAGCTCCGTCTCCTTGCGGCCACGAGGATCTC
AGGGAAAGGCGAACCATGTGGGAGCTTAGTCCATGGAGTGGGGAAGTAGAAGAAATTGGA
TGCCGACAAAGGGATGAAGGCCTGAAAGTGAAAAGCCCAGCCCAGTAGGCAGCGCAGCCC
AGTGGACCGGCCCAGCTTCGGGGCGAGGCCGCGTGCTATACCCGTCCGTCCGGCTCGAGC
GGGCGGAACATTCAGGCATTCCCACCATCACACCGCGCCGCCGCCCCGGCCGCCGCACCA
CCGTAGGGCAACCTCCTCTTTCCGCTTGGCGGCTGGGGCTCTTCGCCCCCCGCGAGGGTT
TTCGCCGCGCACGGAGCAGCAGGGGCACGCCGCGCTGAGAGGTTGAGGGAGATGGCTGCC
ATGGTTGGAGCGCGCAGGGCCCTCCTCGCCGCCCGCTACTCCCCTCGCGGCGAGCTCGCG
GCCGCGATCCTCTCCCCCGCCCGGCGCGTCGATTCGCCGCACAGGTACCGCACGCTCGCG
CCAGGTCCTTGGACCAGTCTTCCCCTGACCACTAATCATGGTTTCATCGTCCAGTGGTTT
AGTCCTGTCTGTGAACTTGTGTTCATTTGCGATAAGTAGAAACAAAGCCACATGAGTTAA
ACAATAGATTTTTTTTCCCCAAAAAATGTGTAGTGCAAGCAATCAACTTCGGTTGGAGCT
TCAGATGGCAGATAGACGGAACACATACGCCCACTCTCATGACACCTTATAATTTCAAGT
GTGCTGAAACTAGCCTGACACTTCAATCCTTATAATTTCAGTGTTCACACAGCCAAACAG
ATTGCTTTGACCCCTCCAAATGGCCAATATGATTTCTTCGACGCATGCTTCTTGCCTGGA
CATTAACATGCTGTGCTTGCTCTTCTGTTTCAGTCTTCCAGCTGAAAGAGGATGCCCGCG
TTTTTTGGTTCCACGTCGAGGCGCTGGCAGTCTGGCATCCGAGCAAATTGATGGAGACTA
TCACCGTGATTGGGGGGTGCAAAACGCAGGGAGCTACGGAGGAGAGTCCCGCTCAAAACA
CTCGCCTGATCATTTCAGTCGCCCCTTGCAGAGGGATCCCCATTCAGCTCATTCTTCAGA
AGGCATTGATAGAAATAAAGGTGTGCATGCTGATGTCGCTGTCAATGCGCATTATGGAGG
CAATTCTGAACAACCTTACCAGAGCGGTGGATCATTTGGCTTACCAGATAGTCGCCAGCC
ATATACCAGTCCAAGAGTGAATAACGAGCCACGTGGATATACTGCCAGGCAATCGTATGG
GGGCAATAGTGCATATGGCCACCAGAACCCCAAGGGCGATATACCAAGTGCTCATCAGCA
GCATGGTGTCACACCTGCTATTAATGGCCTTTCTGCAGATGGTAATGTGCAAAGGGGTCG
TGACGTTACTGGATATGATTGCAGCTCTGGATACAATTCCCGAAGTAACCAGGAGAGCTA
TACTAGTGAGCAGTATGGATATGGCCCGCCAATACTGTCACATCAAAGCTCAACTGGAAG
TGACCAGCAAGTCTTTCAGCAACAGAAGGTTGATCGAATATCTAATGGTAATTACTTCAA
CAAGCCTCGCAATTCTGCCTCACAGTATCCAACTCCAAGCAGTTCTCATAAGGAGCATGT
TGCAGGATCTCAACAAGGCCACAATGGTGATTTTGGATACTATACCAGGCAGCCTGATCA
GGCAAGTAGTGCATACAATCGCCCAAGTCCTAATGGAGGTCCACCAAGTACTCATCAGCA
GCACAATGGCATTGGATATGCCACACACAACTTTGGTTACAACACCCAAAGTAACCAGCA
GAATTATAATGGTAGGCAGAATGGATACGGTCCTTCAGGACAATCATATCAAAGCTTAAC
TGGAAACGTTCAGCAGCAGAATGATTATCAAAGTCATGATCATGCAAATAGGCCTGTGAA
TTCTGCCTCACAGTATCCGAATACTAGCCATTTCCATAAGGAGCATGTTCCAGGATTCCA
GCAAGGCCACAAAGGTGATTTTGGATACAATGCTTCACAAGCATATCAGAGTCATTATAC
CATTAACAAAATTGACACGCATAGAATTCATCGGGAGCGTTTCATGAATGTAAACACAGA
TGTACAGCACAGCCATAATAGAACTTATCCAGAACCACATTCAGATATTCAACCTATTAC
GTCAGCTGAGAACAACTTGAGCAGTACACCCTACCAAGATAACATGTATTTCCAGCATTC
ACTGCCTGGCAGCCTGCCAAATGATGGATCACCTTCTGAAGTATCTAATGAAGTCAGCGG
CATATCCAAAGGTACTATTGAGGAACTGGATAAGTTATGTGAAGACGGGAACATAAAAGA
AGCTTTGGAAGCTCTACCGGTGCTGCAAGGAAAAGGCATTGTACTGCATGCTCCTCAATA
CTTTAAACTGATGCAAGCATGCGCTGATGCATCTGCTCTTGCAGAAGCAAGACAAATACA
TAATCAAATATCTCAATCAGAACTAGCTGTTGACATAGATGTTAACAACAAAATTTTGGA
CATGTATGCTAAATGTGCCTCGATGGAAGATGCAAAGAAACTTTTCAGTACTATGGCGCA
GCATGATTTGACATCTTGGAGCACTATAATCTCAGGGTTTGTGCATAATGGTCTTGGTGA
AGAAGCAACTGACTTCTTTGATCGTTTTAAGCAGACAGGAGATAAGCCGGATCCTGGCAT
GTTCACACATGTATTTTTGGCCTGTGGAATTTTGGGATCGGTTGACGAGGGCATGTTGCA
TTTTGAATCAATGCAGAAGGATTTTGGTATAACTCCTTCCGTCGATCACTATGCCAGCAT
TGTTAATATGCTTGGCCAGTCTGGCTATGTTGATGAAGCTCGTGAATTTATTGAACGGAT
GCCTACGGAACCGAGCGTCGATATCTGGGAAAGTTTGATGAATATGTGCCGACTTAATGG
ATACTTGGAGCTGGGAGATCGTTGTGCTCAGATTATAGAACGCCTGGATCCTTCTAGGCT
GAATGAGCAGTCTAAAACGGGTCTTTTCCCTGTAAATGCTTCAGACCTTGCAAAGGAGAA
AGAGAGGAAGAAGGCTAATACTGCTGAAGCTAGGAGCAAAGTTCATGAATACAGAGCAGG
GGATCGATCCCATCCAGAAACCCTTAAGATCTATGAAGAGCTGAGGTACTTGGCGGCTCA
TATGAAGGAGGCTGGTTATATTGCGGATACTCGATTTGTGCTTCACGACGTTGATCCAGA
AACTAAAGAGGATGCCTTGCTAGCTCACAGTGAGAGGCTAGCCGTTAGTTATGGTCTTAT
AACCAGTGCTGCTCGTTCCCCAATTCGGGTTATCAAGAATCTTCGCTCCTGTGGTGATTG
CCACACAGCTTTGAAGATAATCTCTAAGCTTGTTGGCCGTCAGATCATTGCGAGGGACGC
AAAGAGGTTCCACCATTTTGAAAATGGTTTGTGCTCTTGCAAAGACTATTGGTAAACAGA
ATGGGACGTGTCTACACTGTTATCAAATTTAATAGGTTGAGAACCAAAATCGGTTGTGTA
AATCCTGAAGGTATGTTGCCTATGAAACATTTGGTTTAACCACAGGTTTCATGTCAAGGA
CACGGTGTATCCTATCCTCTATGTAACATCCTATTAGTGTTCTAGTCTGGAATTTGTTAG
CTTGAAGCATTCTTTGTCTGATGATGCTCCCTCACAATTCGTTACATGTCATAAAAAACT
AATGATACAAACTATGGATACACTTGGTTTGTGAGTATTCTGTAGTTCATGCTTGTTGGT
AACTTTGATTGTGCTAAAGTACTTGTATGACTTTTGTACTCCTTGATTTACTGAACCTTT
AACTCACAGCATAGACAATTTGGCACGGTCCTTTACTGGGAGCCTTTCTGTTTTCGTGTT
CCCATAAGATGATAAGAGGATTTTTAGTTATTCCGTGTATCAGGAGGATCTGTGCACCGT
TTATTAGTTATTCCGTGTATCAGGAGGATCTGTGCACCATTTTCGGTGATACGAAACTGA
TATTGTTCTTAGGAACTAGCCTTACTGAAGAAGTCTGCCACTTGGACCCTTGATTGTAAA
AGGAGTGACCTGGGTGCACTCACTTCTGTGGGTTGAATCGTGCCAAATGGAGCTCCAACA
CGTCATTCACATCTTCAAAAAATATACAACATCGACCCAGGTTGCATACAATATCTTGTA
AAATCTTACTGTACATCCAAATTCGATTTGCACCTGGCGCATTGGGGTGTCGTATGAGTG
AGGTCCAAGTGCCATGGTTAGCACCCGGCTCTGAAGCAGTCTGAGTCGTCGCAATTTTTC
TTCAGTGTGTTGCATCATGTGTCAAGTTGCTAACCTCCTTGAGACTAAGACTGGTCATAG
CAGGTGTAACTTAGCTAGTAACATAAGACATTTCAAAAAAAAATACTTATGTGACATGGA
GTTACTGAAGAGAAAGGTGTTTAGAGTAACATAATATGTTACTGTAACATAGCGCTTCCC
AATAAGAGATGTGTCTACACGCTAATAAATGAAGCCATCTATGACACTAATACTATTTTA
CTTTGCACTGTAAAGATAGTAACTAAGCCTAGTGTCATATACATAACATTAGTATAAGTT
ACTCCTCGTTATGACCAGCCTAACCATAATGGGGAGTAACATAGATTAGTACTTCCTCTG
TCCCACTATATAAGAATGTTTTTCAAGCTAACTTAGCTTCACAAACATTCTTATATTGAT
GGACAGAGAGAGTAACATGCATGTTTCTAGTCTCTGTTACTCTCTCTATAATGAGGAGTA
ACATGTGTGATGTCATGCAACACTTTATTTATTAGGTTGTAAACTTACCTTGTCTTCGTA
TGTGTGATATGTGTATGAGTAACTAGATATGCTATTCAATTTATCTCTTTCCTTATTAAT
TAACTGTAAAAAATTTGTTTAAGTGTCATCTATGTTACTCATTATGTTACTTTCACTATA
GGTAGTCTGAGAGTTTAAGTTTTGCTCACATTTGGCATGCCGCCGCCGGACGATCATCAC
ATCTCCTACCAACCAACCACCATTGTGCCCCATCAAATTCCACAACGTCCCTGCCGCCGC
CCTCTTATATCACTATATTTGTGGTCGCTTGCATGTTCGCACAACCAGATTGCATCTCTT
CTAGTATATTTGTTTTGATAAAGAAATTAGTAGATAAAGTTTCTGATCTAACTAGACTAG
AACTAGCTATAGAATTCGGGTTAAAAACATTTTTACACAACGTTCACTAAGGGCATCTCC
AAATCCAATGACAGCCCGTAAATTTTCTCCCAATCCGTCCATGGATACGGAGGCGGGAGG
CCGCCATCCAATGTTATATGCATATATCCTGCCTCTCTAAAAAAATTAGAGTATGCACGT
TCAAATAGCCACATACATAAAGTTGAGACGTTCAAATAGCTGCATACATAGAGTACACAT
GTTCAAATAGCCGCATGCAACACTAGTTCAAACTTTAAAAGGTGCAAGTTTTACATTTCA
ACATTGTTGCCGCTTTAATCGTTCTCAGTCGGATATTTTTTCAGTTGCTCGTGAGTTGAT
CGATGCCGAATTTGTTGATGCATTTCACTAAACCCTTCATATGTGACTGGATTCTAGTAT
GGAAGTTCGATATGATCACCCATGTTCTCACATTCTAGAGTTGTCGCAACATCCTCACCC
TCATTCTCGACAATCTTGTTGTGCATGATCACACAACATGTCATCACCTCCCACAAGGTC
TTCGGTTCCCATCGTTTAGCAAGTCCACGAACAACTGCAAAACGGACCTGCAGAACTCTA
AATGCCCTCTCAACATCCTTTCCAGCTGCTTCTTGTCTTTTGGCAAAGTGAGACTTTTTC
TTCCCTTTTGGGTTAGAGATGGTGCAGACAAAGGTGCCCGTGAAGGATAGATATCGTAAA
CCAGATAATATCCCATCTTGTGCTCATGTCCATTGACAGTTAGTGGCAATGAGGAGTTTT
TCCTTCCGTCAGCCTCACAAACAACGGTGATCATTGCAGCACATTGATGCCATTGTGAGA
CCTGAGAATGCCAAAGAAAGCGTGCCAAATCCAAAGATCATGTGTTGCAACTGCTTCAAG
AATGATGGTGGGCTTCTTAACATGACCCTGATATTGCCCTTGTAAGGCCTTCGTGTTGGA
AATATGCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTGTATTGAATGACGACTTATATACATG