Contig Data
morexGenes
Links



Map Locations of contig_52611 (4674 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52611

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67134 5 1983 bp AK367754 Available Available None
MLOC_67135 1 615 bp MLOC_67135.1 Available Available None





CDS Structure of MLOC_67134






CDS Structure of MLOC_67135






Contig Sequence (4674 bp)

>contig_52611 4674 assembly3_WGSMorex_rbca.fasta
TCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGAGATTTGACGAGGGACT
TGAAAAGCCACCTACACACGCTTTACACCCAATCATTCTGGCCAGCGCGTTCGTGTCTGC
CACCAACATCGTAGGAAACTAGAACACGAGAGGTTGTCGCCGCTTGGTTCCCAGGGAGGC
CACCACCATCACGTCGCCGGCTTGTACAACTGATGATCTGTCCGGTTCTTTATCTCAGAA
CATCGTCGGCCCCCGTCCGGGCTCCATGGAAGCGGAGGAGCTCCCTTTTCCTTCCAACTG
AAGCACCCTCTTTGCCATTTGGATGAGCAACACAGTTGGACATAGGGAAAATACGGAGAA
GAATATACCTTATGAGCTCCCAGCAGCTCGATGAGTGGGTCTTCGGATATGGACAAGACA
AAGGAAATCATCACGGCCGGTCATAGACTAGTGTAGTGTATGAAGCTTCGTACGATCGTA
CATACATATAGTTTTATCATTTCAGTTAAGGCTACCCGTAATGGAAGTATCATAGGTAGT
NTCATGCATGTCAACTAAGCAATTTTGATAAGATGGCATGGAATTAAATGAAGAAGAGTA
TCATACTATAATACTGTATCATATTAAATGATGTGCTACTATGTGTCTTACATTACAATA
AATGAGCTACCCTATGATACTAACATATGATACTATGCATTACGGATGTGGTGATACTAG
TATATGATACTATCCATTACAAGCAGACTAATATATGTCCAAAATATAAATCTGCTCGTC
CAATTCGTATGAAATCCGTTGCCTTTACACGGAATTCATCCCGTTATTTTTTTTAAATAT
GCGGATGGCGTTGGACAGCCGCCTCCCACATCCGTATCTGCGGGCTGGCTTTATACTCCA
CTACCCTAATTTCCTGACCGTCTCGTTGAGTGAATCCTGGAAAGACCGACGACTAGTTTC
GTCCGTCGTCCAACAAATGATAAACCTCGTCACCAACCCATTCGACCGATCGAGATTGGC
TTGGCGCCCATGAATGAAAATCGTTAGTCATCGAGCGAAGAACATCGTCGCCGAAAGCAG
CGGAGCATGAATCCTGCGGCTCGGCGACTTGCGACGCTGCCCACCGAGAAAAGTTACCGG
ATTTTGTAGTATTTTGTCTGTACGTCCGGCGATTCAGGCCACGGCCTCGCCGCCGTCGTC
TACTCATTATCGCTTCATGGTTGCTACTCGTACATACTACTACTAGTATCTCACACGTCA
GCTGCAGCTCATGCACGTTTGTCCACAAGAGTTGGATAAGCAACAAGGACTCAACGTGTC
TCTGCGTCAGTTACTAATCTCTATCTATCTACCAATCCTTCCAATTGCAATTCCAAGCCA
AGCCGAAACGGGCAGCAGCAGTGACGAGGCTTGCCATTTCGTTCGATGCCCAGCCATGAT
TTTGGAGCCTAGCTCTTCCTCTTGGCTTGCCTCGTCGTCGTCGGTGGTCACCTCACCTCC
ACTCCTGCGCGTTGCAGGGGAAGCAGGCTTCTTGGGCGACGTCGGTGATCTGCACGCCGG
TGTCGTAGACCTCGCCGGCGCGCCACCCGCGCGGCAGGACCTCCCGGTCGGCCCAGACCC
ACTTCCCGTCGTACCCGCCGGTCACCACCGCCCTGAGCTGCAGCGGCCCCGGCGGCGCCA
GGCTCGTGCTCCACGCCGGCCCGTGGTCGCGTGTCAGGGACCTCCAGCTCGACGACGACC
CGACCTGCGCGACGTCGACGGCGACGATGTCGGTCTGGCCGCCCTGGTAGAGCAGCGTGA
CGGCCAGCTTGTTCGGCGCGCGGCTCCGCTCCTCCACACGCAGCGAGAGGTTCTTGCCCT
TGTACTCGCACGGCACCCTGCACATGCGCGGCAGCGTTCACAACCGTGAGCATCGCTTCC
AAATTCTAACAGCTTCGAGACAAGTGAAGTCATGTCATGTATTTATGCCATGACGGCAGG
CATGCTCGGCCGGCCGCCGCTCTCTTTTTTGTTCGTATGCCGCACATGGCGCCCGCGGTT
GGTGAAAACCAGAGAGGGGCGTTCTGATTACCGCTTGTACTCGACGTCGACGGCGCCGAG
CCTGGCGAGCCGCGCGGCCATGCCGGGTCGGGCCATGGCGGCGAACGCCGGGCTGCTGAG
CACGAGGTCGGTGTCGTTCGTCTTCGACCTGGCGCGGTCCGTGACGACGACCCTCACGCC
GGCGGTGCTGCAGAGGTCCTCGTCCTTGCACCGCACCTGGAAGCACGCGCCGCAGCCGAC
GCCTTGTCTGTACAGGGCCGGGCCCGCCGCGGCGAGCAGGCCGCCGTTGAGGGACGCGGC
CGCCGCGCCGTACCCGCAGGAACCGGCTGCAAGACACGAGCGACAATCGAACAATCAGAA
CCACACATGCAAAGGTAGAAAACAGAGCATCCATATGAACATAATATGCAGCTGCATGAA
TCGAGAAGAGTTGAATCGATCGATGGGTACCGGCGAGGGTGAGCGAGGAGGTGTAGTAGG
CGGCTCTGGAGCGGTGCACGCAGCGGTCGCAGGCGGAGGCGAGCGACGGGAGGGTGAGGA
GTAAGAGGAGCGGGGGAAGGAGAAGGATGGAGCGGAGAGGGAGAGATACGGCCATATTTT
CTTTTCTTTGGTTGCGGGCGAAGGGGTGGTGGATGATCCTCCCTTGTGCCTCACGACGGC
TTATATGCATCACAAGGCCACCACGGCATGCCACGGTTCACAGAAACTGACAGAGTTCAC
GCCTCTCACACACGACGACCTCGGTGCTCTTGTTAACTGACTTTTTCTTTTTTCAACTTC
TCTTGTTAACTGACTTAACTGTATTCGGTGCTCTTGTGCAGGTACAAGTGTGTAACTCAG
CTGCACAGAGCTCCAGAGGATTTTATGGACTGACATGACAACGCTTCTTGTTGGTGTGCA
TCCACCAGGAATTGAACCCGTATATTCACTGTTGAATAAAACCAGCCGGAGCTCAAACAG
GTGCTATGGCCTATGGCAGCCGTTTTTTCACCGCCAGCGTTACTAGTTTGCAGCGTTTTT
GGCTTTCCTTGTTTTATTTTCAAGGAACAGCTAGGCGTCCACCGGCGGATCTGTACTAAA
CATCCGTCATCCGAATGACCGTTCGATGTACGCGCTCGTAGTCGTCCGATCCACCTGCTA
GCACGCGGCTCGGTCGTTTTCTTGATCAATTAATTTCTGAAGCAACGGTCTAGTTGCAGA
AACAATGAATGCGTTGCGGAAACAATTTCTAAAACAACGTCTCTGGTCGCGGTGGAGACC
GTGCTGCCGGGCACGGGGGTGGCACCTGAGGCCACTGGGGCGTAGCCCCTACTCAGCCGC
ATCGGATGGGGGTCCTCGGGGGCTGAGGGATGACCGAAGGCGGCGGCCGGAGCTCAGCCA
GGTCAGGCCCGTCGCTAGGGGCAACGAGGGGAGGAGCTGGAGTTAGCTACGAGCTCAGGG
AAGTGTGGAGAATGCGATGAGGATACTACGACAAGCGAAGGAGCTCAGGAAATGGGAGCT
CAGCGGCCATGGCCATGGCCGGAGCTCGGGCTTGGCAGCGAACGATGCTAGGAGAGGGAA
ACTACGACACGGCTAGGAGAGTTGCAGGAAACTGTCCTGAAACAATAGGTGAGCTGCAAG
AAAAACGAAAGCGGCTTCGGCAAACAATCCTGAAACAACAGGTGAGTTGCAGGAAACTGT
TATGAAACAATAGATGAGTTGCAGGAAAAACGAAAGCGGCTTCGGCAATCTATCCTGAAA
CAACAAGTGAGTTGCAGGAAACAGTCCTGAAACAATAGGTGAGCTGCAGGAAAAACGAAA
GTCAGCAAACTATCCTGAAACAACAAGTGAGTTGCAGGAAAGTGTACTGAAACAATAAAT
GAGCTATAGAAAAAACGAAAGCGACTTCGACGAAAGCGGGACGTTGTCGACTGTCTGATC
AACACATGATCGAACGGCCATGGAGTCGGCAGACGGGCGCGCGTGATCAGCCGATAGAAT
GTAATCTTTTCCCTTATTTTTATTATGTTTAGTCGGTTATTTAGTTTTTAGCTCTTTGGG
CATCTTTAATGCGGTGTGTAATATTATTTTCCGGTATCCGTCTATGGAACAATGGGTCAG
TCCGTGGACGGTGATGCCGGAGACAGTCATTCAAGGCTGCTTGCATACATTTCAAACACT
TGATCAACAAACTGAATGAATTTCATACAGATACATCGGATTTCATATAGACCGGACAAA
ATTCATTACATTTTGGGTATATTTTTTACTAAAATAGATAAAATCTTATGCACGTCCGAA
TGTTCCCTAGCCCTCCAGTCAGGGCCGGCCCTGGCGTATGGCCGAAGGGACGACCGGCTA
GGGCCCCGCGAGTTGGAGGGCCCATGATCTGGTATGGATGTATAGCCTCGTAAAATGTTT
AGGTAAAGAAAAGAAGACAAGGAAGGCAGGGTGATGGGCTAGGCTTAATTGGCTGATCGT
TAGGGAAAGGTGAAGCGTTCTAAAGCGAATCACGTGCCGCAATCCTCATCAGATATACTA
GCAAAAATGTCCGTGCGTTGCAACAGAAGAAAAAAGTCAACCCTATTTTCAAAGAGGTGC
CACATCTGGAGTTCATGTGAGCCATACGCGACACTCTCTCTAGTGAAACCACCC