| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_52536
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67079 |
1 |
1167 bp |
None |
Available |
Available |
LOC_Os09g33480.1, FRAME:+3, EVALUE:2e-19, 13109.m03327 protein DAG protein, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_67079
Contig Sequence (4417 bp)
>contig_52536 4417 assembly3_WGSMorex_rbca.fasta
GTGCCTAAATATAAGTCTTTTAAGAGGTTTCACTAAAAGGACTACATACAGATGTATATA
GACATAATTTAAAGTATAGATTCATTCATTTTGCTCCGTATGTAGCCCTCTAGTGAAATG
TCTAAAAAGANNNNNATTTAGGAACGGAGGGAGTATAAGACGTTTTTATAGAGTTGTAGT
TGGGGAAATACTTACCTTCAGCTGGCAGATCACACACGAGCGATCTACCGCCTCCTCTGT
ACAACGCGTGTACGCATACTTTACACCTCTCTTTCCGTAACATTACGTGTGCTACAAATT
TACCCTTTACAACAACACCTATGTTGCAAAAAAAAAAACAAAGAAAAATTGTAAATATTT
TTCTGCAACATTGTTTGTGTTTTTTTCCGAAACAACGCTCATGTTGTAAAAAAAATCGCA
ACACTGTCTTTGTTGCAAAAAAAACCGCAACACAACCTTTATTGCGTAAAAATTCTGCAA
CAAAGCCTTTGTTACACAAGTTTCTGCAACAAGGTATGTGTTGCAAAGTAAAAAAGGGTG
CATCCCGTTAAATCCGACGGCTCGCATGGCGGCGGATCTTTTTAAAAGATCCGCCGACCG
ACGCGTAGCAGTCCCCTTATAGTTGCCAAAAACATTTTATATTTTTGATAAAAGGGTAAT
AAACTACCCAAAGTGTCCTTGACGTTAGACTATACGTACAATAGTTTTGTCGTAGTATTG
ACTACCTTTGCCTTTGGGTCAAAAAGAAGACGGCCAGAAAAACTTGACGTACTCTAAAAG
GATCTGCAGTCGTTATTCTGTCATGTACGATATCCAAATTGTGAGAATCAACCAACAACA
ATCTGAATTGGGAAGTTGATTGATTCCACGAGCAGCTCCAACTGTCAACGAAACAACAGA
AATTGAATCATAGCAAGCAGACTTCCCATTTCTTAGGTTGAACTGGAATTTGCTCCCAGT
ACCTCAGATCAATTCAATCCAAACCGAACTCTCTTTTTTTCTAACAAATTAAATAAGCAA
ACTTCAACACTTTATTTATCTAACAAATTAAATAAGCAAACTTCAACACTTTATTTATTG
AATAGAATACATATATTACATAGAGTGACTCACAAAATTACTGAAAACATGCATGCTATA
GAAAAGAAATGGTAGTTGTAGTTGGCACTCGGCGCAGCGAGCAAATAGTTTGACCGGCTC
ACGTACGTCTACCCGCTGACTTCAACACCCACATCTCACTGGCTATCACGTACTCAGTTT
TGTAGCTGCATGCATGCATGCAAGCCACAGGTACATACACATGCAGCTTGCGTGCTTATT
GGCTAATCTACATATAACAACTATACTAACTAGTAGTACAAAAAAAAAACGATACTAACT
AGGAGTAGTAGTAGGAGTAATACGTGACTGCATGCCTCTTGATCGAGCATGCCGTTAACT
AATTAATTAGTTGTTCTTGGGAGGCGGCAGCGGCTTGAGCACGAGGCCGTCGCCGCCGGG
CCTCTCCTCGACGGCGTAGGGCATGTGGGTCCCGAACACATGGTCCCACGTGACGAAGAA
GAGGTCGGAGAAGTTGTACCTGACGCCGCGCGGCAGGTGGTGCACGCCGTGGTACGCGGC
GCCGTTCCACACCGACTGCAGGCGGCGCGGCAGCAGGCACACGCCGCAGTGGTTGTCGAT
GGCCTTCACGGTGCACAGGGTGAGGAACATGGCCGTGGCGCGCGGCGACGACGGCAACAG
GCCGGTGACGAGGACGGCGAGCGAGGCGCCGGCCGTGTCGGCGATGAGGACCTCGACCGG
GTGGCCGTAGATGGCGCCGAACGCGTAGGGCACCACGATGCGGTGGTGCCACGGGTGGAG
GTGCCGGTACAAGAACCGGTTGAGGTGCGCCAGCCGGTGCCACGCGTACCGGTACGCGTC
GAACACCAGCACGGCCGCCGCGATCCGGGCCGCCGCCGTCAGGTACGCCGCCGTCCGTGA
GACGCCGTCGGCCTTCGCCGCCGTCGTCGCTCCACAAATTCACGACGTACGTGCATGCAT
GCCGGCTAGTGACGTAAATAAGATGAGTACTAAGTACTAACGTACCATGGTGAGCAGGGC
GAGGGCGGCGAGCTGCATGAGGACATTGAGGATGACGGCGCGCTTGGACACCATGTTCTT
GCGGTCCTCCTCGTCTTTGGTGTTGAGCCGGTACTTGTCCATGAGCCGCGAATTCCCCAG
CGCCGTGTGCACGCCGGAGTAGGCCCAATAGACCGCGATGGGCACTTTTAGAAATTAATT
AATAGATTAATTCAAGGGATATGTCCAATCCGAACAGTCGTGTCTCTTCTTTGTGTCTAT
TGTCAACAGGCACCTGTTCTCGAGGTTTGCATCCGAACAGACACTTCTTTTTCGCACCTC
TTTCAGATGTATATATACTTCAGAATCAATAGAAAAAGGACTGCTGGTCCATTCACTTTC
ATTCAATCTNNNTTTACTCTAACACGTTATCAGCACGCTCTATATCTGAGCGATTTCGAG
ATCGAGAAGAACACAAAGAAAGAAAACAGGCAAAAGGTAAGAAGAAAACCAGTCGCCCAT
GGCGTTGGATTCCGCAGGACGCAGCCGCCCGCGCCGCGCTCCTCGCGAGGCCGCCGCCAG
CCCCGCCCGTCCCTGCCATGGCCTCACTGCCCGCGCTTGGTCGTGGTCGCGCAGGACCAG
GCCGCGCCACGCCGTGGCCGCCCTCGCGTGCGCCTGCTCTGCGCCAGGCCGCTGCCTGGC
CGTGGTCGCGCTCATCTGCGCCAGGCCGTGTGCCGCGCTCCCCGCCCGGCCTTCTCTGCG
GTTCCTCCTTAGAGGAAGACGAGGGAGCGCGTGGTCCCTCCTCACCCCATTTCCCCAATC
TCCTGCCTGCTAGCGTTATCCACCATGGCGTCGGCGTCGCGCGCGATCCTCCTCTCTAGG
GCCTCGCCCCTCCACGCTCGCCGCCGCGGGGAGCCTCCTCCTGGCCGCGCTGGTCCCGTC
CCCCGCTGCGGCGCCCTGGGCGGCGGCGAGGCGATTCGCGACGCAGCCCGCCAACTCGTC
GTTGTGGGACTCGTCCCCGAACTGGAGCAACTGCCAGCCCAAGGAGACGATCCTCCTCGA
CGGCTGCGACTTCGAGCACTGGCTCGTCGTCACGGAGCCGCCTCCAGGCAACGACGCCCC
TCAGGCGCGGGCGTGCGGCGCGGAAGCCAGCGGCTGCAGCACCCTCTGGCATGAAGCAGA
GGCGCCCTCTGGCGCGGATCGCTGCAGCGGACTTCCATGGCTGCTCACCATGGCGTTGAG
AAAGCGTACCAACACGGGAGAGAGAAGGGATCTTATCCCTTGTGGACTTTTTGCAATATA
GTCTCCTTTTATCTATATTATTTATTTTAGGCCCTCAGGCTTATTTCAGCACGTAAGAGG
GCACGTTTGGTTCCTGGGCAAGTTCTTGCCTTGCCTCGCAAAGCAAAAAAAGCGAAGGGT
TTGGTTCCTGGACAACTCGCCTCGTTACGTGTAGTTTTCAGTTTTTTTTTTCTCTTTTGT
GTGAGCGAGCCGATTTGGCTATCCTCGGTTGACAAGGCTACCCTTGCCCAGCGAGGTGAG
CAGGCAAGAGATCCAAACACTCCGGTTAACTCTTTGATCCTTGTGTTGAAGCCCGCAGGC
TTACTATTTCCAATAATTTAGCCATCTAGTTATTACTATTTGCGTTCTAAGGAGTATATG
TGGGAGAACCTTAGATCATCATAAATTACATATAACATAATTATATGTTATTTTGCAAAG
GGTAAAATTGCCATTTCAAGACCTCATGTCTTCATATATTTGCGTATTTGCGTAAGTATA
TAAATTAACTTTTATAAGTATATATATATATATTACCGTAATAATATTGTTGCAAAAGAA
TGTTTTGCTTACATTCCAGATCATATTCCTTCGGAATTTAAGACATCTTCTGTCGCTACT
CCCTAAGCATTACATGCAATTTGTGACAACCACTACGACTTTGCAATAGAAATAATTTTT
CTTGCAAATCTTAATGAAGTTCTAATAAGAATTATAAAGTGTCATACTTAATATGACTAA
CCCAATTTTCTTTTTGCGAATCACAAGGTATTGTTGGCATCTACTGCACCCTTTGCAGAT
TATCCATCATTACTGTGAGGTCTACATCTTGTAAATTTTACAAAATGATTACCTTCAAAG
TGATTTTCTTAGATATAGCATAACATAAGGTAATAGAGATATGAACATCTACTCATGAAA
GTCGTGTTATGTTTTCTATTACTCGGAGATCTACACCATATTGGTGATTATCTTCAAAGT
GTTATCCTATATAAATTGAGGTCTACACAGATGACTATAAGGCATCAGTCGTACTAGAAT
TAGCTTCTCCAAAACATTCATTGTTGTTGTTCACTAA
