Contig Data
morexGenes
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Map Locations of contig_52512 (5529 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52512

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67067 2 4344 bp MLOC_67067.2 Available Available LOC_Os02g41650.3, FRAME:-1, EVALUE:0.0, 13102.m04599 protein phenylalanine ammonia-lyase, putative, expressed





CDS Structure of MLOC_67067






Contig Sequence (5529 bp)

>contig_52512 5529 assembly3_WGSMorex_rbca.fasta
CCCCGCTGCCACGGGAGGGTAGAACAANNNATGTCATGCAAGTTCTTATCGCAAGTACGT
ATCAGAGCAAGACAGGGTTCTTCGGCGTGAGGGTGAAGCCCTTCGACAACTTCGGGGTAG
AGTTCGGCGACGACGATCGTCGCTTTTGGCTCGGCACCCACGCCACCGTCCACGAGGCCG
CACGTGCCTACGACGTGGCGGTGTGGCGTGCCGGGAGGCCGGGGACGAACCTCAGTTTCC
CGTCGATCGAGACCCACGCGATGTGGAGTTGCTTGTGCCTGGGGCAAGTAGTAGTTTAAT
TTGCTATCTTTGAAGTATATGTTTCAAATGAAGTAGTGGTTGAATATGCTGTGTTTGAAG
TATATGTTTGAAATGAAGTACTAGTTGAAGTATAGTTTTACATTTTCATTTGCATCCTTT
ATTGGAGTTGTTGTTTTACATCTTCAATATACATTTTCTGTTGGAGTTGACACTTTTCTT
GGAGATACAAAAAACACTTCTTAGAGATGTAAATCTTACATCTCTAAATTTGCATCTTCT
GTTGAAATGCTCTTACCATTCTAAATTACTCCCATCATGGGTAGTTTGACTGTCTAGCAT
GCATAGCAACCTTTGATGCTCCAAGCAAGAGCGTCAAAGAGGTTGGATGCAGCGAGATAT
TAGCTGTCATATACTAGTACTTCCTACCGTTGCGAACGAACAAGGCACGTTGACGCCTGA
ACTAATTCAAATCATTTTTGTGCCCGCCCACGGAACTTTTGCGCTCCTGAAGATGAGCCA
TCACATCGCATCACATGGCCAAGTTTGGGACGTGAAATCTTCCCTGTTTAAAGTAGATCA
TCTACCATGTACAGCAGTTGTGTTGTCTTTTCCCTTCAAATCAAAGGTCAAACTAAATGT
TGGTGGACAGTAGGACGCCACTGATCAACATTCAACAAGAAAAACCACTCCAATTCAGTG
GAGCCAACAGCCAAGTTGTTCTCTGAACTCGTTTTCTCAAAGTCTGAATTCGCACGCAAC
CTAGGATAGTTGTTGAACGGATGGCCACGGGCCACCAGCAGCTGCAGCTATTTCAACTCA
ACACATGTGCACGTCTCTTGCACCGACAGCTCGGGAACGGTACGTACGTGACAAGACCAA
GGAACAAAACCCAAGTCTTCAACCGAAAACCCTAAACTACCAGTGCTCATGATCATCAGT
ATAAGAAACAAAGGCGATAACACGGTGTATTACGAAACAAAGTAATGTACTTAAGCTCCC
ATCGTACAAGTTACAACAACAACACAAGTTTGAGAGGCTGCCTGCCTCGCCTGCTCATGG
CATGGCGGCAGCGGAAAAACAACAGCAGTAACATCAACTTAACTACAATGAAACTTAGAC
ATATCATGAACCTCCCGCTTCACAGTCTTGAACAGTTCTATATTCACTTTGTGTGTACGT
GTTTTCTTTTCTTTCTTTTGGAGTTACCTTCTCTTGTCGACTGCTCAGCAGAGTGGCAGG
GGCGCGCCGTTCCACTCTTTGAGGCACTCCAGCAGCGGGTCGATGTGCTTGCGCTCGTTC
ATGGCCACCAGCACCTTGTTCAGCTCCTCCCCGGGCGACCGTGTCTTCTCGCCGGTCAGG
TACTCGGTGCCGCACACCTCGCGGACGAACTGGTAGAGTGGGTAGGAGCGGCAGTCCTTG
ATCCGGTTGGGAGCCAGCGGCGTGCCGTTCTCCACGGACGCGCGCGCGGCCTCCACCTCC
TTGGGCAGCGCCGCCCGGATGTTCTGCTCGAACTCCGCCACCTTGGCGAAGATGGAGGTC
TCCAGGGCGCGCTCGCCGTCGCCGTTGGCCAGCGCGTGCTCGACCAGCACCGCCCGCAGC
TTCTGCATCAGCGGGTAGTTGGGGCTGCACGGGTCGTCCGCGTACGCGAACACCGCCTCG
CGGTCGATCGCGGTCAGCAGATCCTTCTCGCAGAAGCGGGCGATGTGGAGGCCGCCCATG
TTGTTCATGCTCAGGGTCTTCTTGGCCACCTGCATCACGCAGTTCCTCACCGCTGTCTTC
ATGTTCTCCTCGATGTGGCGGAGGTCAATCGCCTGGCACAGGGCGACCAGGAACGTGGAA
GACATGATCTTCAGGATGTCAATAGCCTCGGCAGTCTTCCTGGATGAGATCAGACCAAGT
GAGTTCACATCCTGGTTGTGCTGCTCCGCGCTCTGGACATGGTTGGTCACCGGGTTGCCC
AAGAACTGCAGCTCAGAGCAGTATGAGGCCATGGCGATCTCGGCGCCCTTGAAACCATAG
TCCAAGCTCGGGTTGCGCCCACCGGACAGGTTGGAAGGCAGGCCATTGTTGTAGAAGTCG
TTCACGAGCTCCGAGAACTGGGCGAACATCAGCTTGCCAATAGCAGCAATGGCGAGGCGG
GTGTTGTCCATGGAGACACCGATGGGGGTGCCTTGGAAGTTGCCACCGTGGATAGCCTTG
CCACGGGAGACGTCGATGAGCGGGTTGTCGTTGACAGAGTTGATCTCACGCTCGATCGAC
TTGGTGGCAAAGCGAATAACTTCAATTTGTGGGCCGAGCCACTGAGGTGATGTGCGGAGA
GCGTAACGGTCCTGCTTTGGCTTCATCAAGGGGTCGAGCTCACCAAGCTTCTTTGCCTGC
TTCATGTATGAGCTTCCTTCCAAGATGTGCTCCATGATTGCAGCCGCTTCTATCTGTCCA
GGGTGGTGCTTCAGCTTGTGGGTGAGGTGGTCAGTGAACTCCGGCTTGCCGTTCATCACC
TCGCAGAACACGGCAGACAAGACCTCGGCAAGGACGGAAAGAACATTGGCCTCGAAGAGC
ACAGTGGATGCAAGACCAGAGCCCACAGCCGTGCCATTCACCATGGCAAGGCCTTCCTTG
GGCTGCAGCTCAAAGAAGCCATGCTCGATCCCGGCGATCTTGAACGCCTCAGCAGCGGTC
ACCTTGCTGCCGTCAGGGGCCACCGCAACAGAGTTCTGTCGGCCGGTGATAAGGCCGGCA
ATGTAGGACAGCGGCACAAGGTCACCGGATGCGGTGATGGTGCCCCGGAGCGGCAAGCAC
GGCGTGACATTGGCATTGAGCAGCTTGGTGATGGCCTCGAGGATCTCGAAGCGGATGCCG
GAGTAACCCTGCAGGAGGGTGTTGATGCGGACGAGCATAGCCGCGCGTGTTGCCTCGGCG
GGGAGAACGTGTCCGTCCGTGCCAGTTCCGAAGGCACCGGCGTTGAGGAACCTGTCAAAC
AGAGGGAAGCAAACCGGTCAATTTTCCTGTAGTGTCATTGCCGACTATGCACAACTTGGT
CAGAGCTCAGAAATACTACTACTTCTGTTTGTAACAAAAATGGCACAACGTAAGATTTGG
TCGATGCTTGTTCCTTGCTAGTACATGGGCACATGGCAGTTACGTGTTGTGCCGATTCTG
GAATAAGTTATTTTTTCTTCTTTCTGGAAATTGGTGCTTACCATTTTTTCTTCTGGAAAT
TGTCTACATGTTCCCCATGACAAGGTGTACGACTAAGTCAGTCAGATGCGCGTCTTTCCT
ACACGTATAGCGACAGGTATACAGAGTGGCCGTCGGTGGGAATAAAATACAAGTAATAGT
CCGTGCCCACGCTTGCCACTTGACCACTCCCACGTTCTGCTGAACATATTAAAGTTCAAC
TACGGTGTACAAGAAAAAAAACAAGTGTTGGAGCCGGCGTTATCTGCAAAAGTCTAGAGA
AACTTCTCAACCATGACTCACCCAACCCAACGAGAGCTGGGGCAGAGCTGCAAGTACAAG
TACAACAACGCCTCACCTAACCGCGCTTGCGTGTCACGTTCGCGCTCCCCCGTTCCCCGA
ACCCACCCACGTCTTCTACGTGTGATGGATAAAAATGCGCGGTGCACAGGACTTTGTCCA
TCCGTCCGCATGCATGACAGACACGAGCCAGGCAGCCCAACTAACCCACCACCAAACAAA
AGAGCTTTCGCCGGTTGCTCCGGTGGAGCCAAAATCAACATCCAACCCGGCTGTCGGTGA
AGAAGGGAATAATGGCTCATCTTCTTTCTTCTCGCCGCGAAAAGAGATGAACGGTGGACC
ACGGCGGCGGGAGCCCCACACTGCAACCCTGGGGTGGGCGGGCTCTCCGTGCCTACCGAG
CTGTCGCTGCCACTTTGTTTCGTGGAGTGATTAGATTAGGCGGGCACGCCCCCATCGGCC
CTGATTGAGATGGCCAGCTGAACAGAGAGCAGCGCTGCCTGCTCTGGTGGGATGTGTGTG
TGCGCGCGCGCGTGGTGGACCATGTTGTCAAGTGCTCTAGATCCTCAACAGATCTGGTGG
CGAGGTGCCGGTTCACTGAATTGCTCGTCCTAACCTGGCTGGCTAACATAACTTGCTCAA
TTGATCGTTTTGCTAGTAGTATACTTAGGGAACACTTGAGGTCTGCACAAAGTAAACTAC
TTCCTCGGTTCCTAAATATCTGTCTTTCTAGATATTTCATTACAGACTACGTGTAAATGT
ATATAAACATAGTTTAGTTAATTTTTTAAAAAGATAGATATTTTAAAACAGAGGAAATAG
TAGTGAATTTATGTTCAAATCCTCGAGTAAAAGGACCGTATGGCGAGCGGTAGCTAATTT
TAGGAAAAGTTCCAGTTAGCTGGTGGGTAGTAGTAGTGTCACCAACGACCTATCTAACTC
CCCGAAAACCAAAAGAAAAAAGAATCCTTTTGGGCTTCGGAATCCCGTGTACACGACGGA
ACAGGGCACATGCGCGCGCATCCAGCGCAATCTAAAATGTTTAATCTCCTCCGTAATAAG
TAGCATTTTTTTCGCGGTGTCCGTAATACTAACATATTAATGTCTCAAAGTCAAAACTGA
AGAGCATGAAGAAAAAAAATAAGGGTCTGCTGTGGATCCTGACCTGATGAGCTCTCTCTG
TAGCGCGCCGCCCTCCTTGGTCCGTCGGTGGGAGGTGGCCCCGAAGCCGGTGGTGACGCC
GTAGCTGTCGGTGCCGTTCATCATGCTGGTCATGACCCAGTCGCTGCTCTCCTTGACGCG
GCCGCGGGCGGACTCGTCGAGCGCGACCCTGGCGACGCCAGCGCCGGCGGCCACGGCGGC
CACCTGCGCGATCCCGAGGGAGGCGCCCTCGATGGTGACCAGCGGCTCGCGGAACTGCGC
CACCATCTTCTTGACCTCGTCCAGGTGGCTCCCGGTGAGCTCCTCGGCGGTCTTCACCCA
GTTGAGGGGGTCGGCGGCGCGGGGGGCAGAGACGCAGAGGCCATCGCCGTTGAGGGAGCC
CACGAGGCCGGTCTCGCACTCCATTGCAGGTTACACTTACACGGATGGAACAAAAACAAT
GCAGGGAGCAGTACAAGCACGACAGATGTGGGGGAAGCTACCACTAGCGCTACGTAGTAA
TTAGCGTACGTTTATATTGTAGATGGATGGAAGGAAGAAGAGCTTGGGGCGAAACCGAAA
GCTAAGCTCTTCTTGGGGAATGGCGGAAGGGGGGGAGGGAGGTTAAATAGCGGGCGGGGG
GCGACGGGT