Contig Data
morexGenes
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Map Locations of contig_52451 (6473 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52451

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67030 1 410 bp None Available Available None
MLOC_67029 1 491 bp MLOC_67029.1 Available Available None
MLOC_67028 1 758 bp MLOC_67028.1 Available Available LOC_Os03g60570.1, FRAME:+3, EVALUE:8e-30, 13103.m06648 protein ZOS3-22 - C2H2 zinc finger protein, expressed





CDS Structure of MLOC_67030






CDS Structure of MLOC_67029






CDS Structure of MLOC_67028






Contig Sequence (6473 bp)

>contig_52451 6473 assembly3_WGSMorex_rbca.fasta
ATAAGTCTTTTAAGCGATTTCAATAGATGTCTACATACGGAGTAAAATGATTGAATGTAT
ACTCTAAAGTATGTCTATANNNNNNNNNNNNNNNTCCACTAGTGAAATCTCTACAAAGAT
TTATATTTAGGAACGGAGGGAGTATATGTTATTGCAATCACGACCCAAAATAAAGAGAGC
GGGAAGTTTACAAGCCGTTGGACCACAAAAGATAGGAAACGAGACATTGAACATCTAAAA
AACAGATAGTCAATAGATTCATCATATATGAGGAACTTTGCCACAGTTCTCAGAGGAAAT
AGGGCGGAGGGGTACTTCTTTTTTCTTTATATGTCTGGTCATTTACACTTGATTGATGGA
GAGGACGAGAGAGAAAGAAAATAATGAGCAAAGAAAAGAAAAATATGAACCGGGATAGGG
TCACGTCCTATGTGACGGATTGACCGGGCGTCGCGTCCGCGAGCCCTCATTTCCTTTCCA
TATTTGAGATGTATATGAGGGTTTCGAACAATCCGGACATATAAGAACGATATAAAGGGT
CCCGTTGGGTAATTTTTTTCATTTTCTCATGTCATGTCGTTGACAGGATGCATTCGCACA
TGTTATTTAAGAGTATCTCGGGCAGACCCCCTATAATGCCGACCCGTAAAAGTTGTTTAC
GGTTCGTGAAAAACGGATTTTACGGGTCGGCGCGGACGCGGACAAAGACAGACCTCCAAA
ACAGACTCGTATAAAAGAATATTCACAGAAGATGCTATTATATAGGTCTTCAGTGCCGGA
TCTTCTCGGGCGCCACCGCGTCGTCCCGCAAACCTAATACCCCATAAATCAAAATTACTC
ATCATGTGCAATTCAGACGCTTTCCTACTTTTGGGTTCTTTGATGCTACGCACAAATGCG
CGTCAAGAAGGGTATATACCATCTCAAAGGTAGTATCCTTTTGTGTATTCATGTTCATTG
ATAATGTAGTTGCAAGTTGGAGCATCACCACTAGCAAGCCTATCAAGCAAATGAGACCGC
TGCAACGCATTGATATTATTTAGAGTACCCGACATACCAAAAACCAATGCCAAATTCATA
AATCATGTGAAGCCACGGCATCTAACATAATTGTTGCATCACGAGACTTGCCATAATACA
TTGTCTGCCATGCTTTTGGGCAATTTTTCCTAGTCCAATGCATACAATCTATGCTTCCTA
GCATGCGAGGCCAACCTCTTCTTTCGTTAAATGCCATGAAATTTTTTGTCTCTTCCTCGT
TCGGTGCCCGAAGATATTCAGGAGCAAAGACACGGACAAACACTTTGGTAAACCAACGCA
CTGACTCAATTGTACTATCTTNNNCAATGCGAAGGTACTCATCGGTATATATAGTCAGCC
GGAACGTCGTACGAAATTATCCGCATAGCTATCGAAATTTTCTGATATGCACTAAATTCC
TTCAAGTCCGCGACATTCCTTCTTTGAGTAAAATATGGACAATTGGCCTCGCAAGCTTCA
ACAATTTTAACAAAGAGGGATCTGCGCATACAGTACCTTCTCCGGAAGAGTTGCGGCGGA
TATGTTGCATTGCCGGCGAAGTAGTCTCGCATCACCATCTCGTTGCCGAGATGGCGATTT
CAAGGAATGCAAAGATGGCCGACAGTCGATCGATGCCGCCTCTTTCGGTTCTCGTCTTCG
TACTTCTTCATGGCAAGGGCCATCACCAAACTCTGCTAGCGAAATGTGTGAAGCATCGTC
TCAACATCCGAGTCATCCGAATCGGATGAATCCTCGAACAGAAACTTCTCGCACAGGCTC
AAGTCCATCTCCGGTGATGTCTCTCTCGCCGCCGTGGATTGACGGATCCAGGTAGCAGGG
GCAGCGGCGCGCGAGCAACACGATTCACCCCGCAGATTCGGCGAAAATCGCCGGCGGCTG
ACTGGGGGAATCAATGGCGGCGCGGCGGCGGAAGGATGTGAAGGAAGGGTGCGGGCTGAA
ATGTTCGTGACGCCAACCGCTTTTCTGGGATACATGGCACCGTATAGGCCAGGCGAAAAC
CTGTCTTTTCGCAGGTCGGGGAGGGGATTTTGCCGCGTTCCTTACAGTACGGATCGAACA
TGTTTGCGAGGTCTGATCTGACAGCATTTTTCACATAGATCCTTATTTTATCAGTTATAT
TAAGGATTGGGGTACTATACGAGGTCTGTTAGAGATGTTGTAAGAATTGCGCTCGTAGAT
GCTCACGGCTCACCCGTACCCAACAACAGTTCACCTGGATCAGTGTCGTTGCTATCGCTT
TCTCCGGTATCCATCCACAAGGTCATGATCTGCCGTGCAAAAGAACTGATCAGTGCATCC
GTATTGAGGTTAGGTTGTCCGAATTTCAGAAAAGAGACGCGCGCACCCGCGTACGGCTGT
AAATGCACATTGACGATGGATCGAGTGCGTGGTGCGTGTACCTCGACGAGAAATCCCACC
GCTGTGGTGCAGCAATTTATGTGAACGCGGCAAGCCGTTTTTGGACTAGAGTAGGGAAAG
AGAGCCAAAATCGGAAATGTGGAATCGTGTGAGTTCTTCTCGCACAAGGCTTGTCCCTTA
CTAGCCTGTCAAATCGGGTGCCTCTTGAATTATCGCTCACAGCAAATTAACATGTGATTA
GATGCTTATAGGGATACAGTGAATTAACATACGGTTGGCTAGTTATAGGAACAATGATAT
TTTCAATTCATCATGGTTCAAGTCCTTATACTCATCTTTTTTTTTTAATTTATTTCATAA
GTTTCAACTATTCGTTTTTAATGAAAGGAAACATTTCACTCGACGAGGACATACCTACGT
GAATTCATAAATCTGAAGATAATATGATAGTTCAGTCTTTTAAAAATATTCATAAGGTTA
GATGTGCATCTGCGCATTCATATGAACGAGGGTATGTAAAGTCTTGCGTCTTTATTGTGT
TAAGAAAAAATTAGGGTGCACATTTGCAACAACAATCTATGTTTGGGTACCACGCAACAG
ACAAGGAGTGCGTGCGACCCCGGTCTCTCTGGGTCCCACAGCTCAGTAGTTCATCAACGC
CTTGTATCTTTTGCACCATGCTTAACACCGTCAGCTAATTATTAATTAAGCTCCGGTCCC
ATTTCGCGTGCCCTTCCGTCCAACCGCGTCTGCCGTCTGGGCTACCTGGGGAGCAAGCTA
ACTAAGTACTACTCCCACTCCCAACTGACGCGAGCGAACCCAGAAGATTCTGCCTTTTCA
GACATGCGCTTGAGCCGGGTCGACGCCGATCGCGACTGCGACTGGCTCCAAGCTCATAAC
CCTCCACACGTCAAGAACGACGTGGTGTAGACGTGACGCAACCTGGCTCCTACAACTCCA
CATGCCTAGTATAAATAGCCAACAATCCACACGACCCAACCACACCCACAGCAAATTCCG
AGCTCTTCCAAGTGAGCTCATTCCACCTCCCGCCTCGCTCCTACATCCTTTTGCACTTCG
CACAGACGCACGAGCTCCCGTTGTGCAGCTCATACCTGACCAGACGCCCATGGTTTCCTC
AATGAAGCAGTGCAGAGACCAGGCCGAGGTGCCCTTCGTGTCCCTCTCGCTCTCCCTCGG
CGCCATGGCCGACCGCATCAGCAAGAAGCAGCGCCGCGGCGCGGACGGCGAGTTCGTCTG
CAAGACGTGCAGCCGCGCCTTCCCGTCGTTCCAGGCGCTGGGCGGGCACCGGACAAGCCA
CCTGCGCGGCCGCCACGGGCTCGCGCTCGGCCTCGCCGCCGGGTCCGATCAGCCGGCGAC
CAAGAGGACCACGGACCAGAAGCAGGCGCACCAGTGCCATGTCTGCGGGCTCGAGTTCGA
GATGGGGCAGGCGCTCGGCGGCCACATGCGCCGGCACCGCGAGCAGGAGGCGCCCGCCAC
CACGGCGCAGGCGCCGCCCGTCCTGCTCCAGCTCTTCGTCTAGCGCTGGATTGATTTCTC
TCAAGTTCAATAGCTAGGCATATAGAGTATATCTGGTTCTGGTCCAGATTTACAGGTTGA
CCTATGTGTGCTATTTGGTTTGTACATTTGCTGCACACTAGGTTGTCTACTCTTGATCCT
TGGCTCGTTTGAGCATTGTATTGGGTATATATGTACATATTTAGGACTCGTTCATTCGTT
CATTACTGTTATTATCCATACTTTTTGATTCATACTTTTATTTTGTTCTACTTGAATCGA
CTACGAGTTCGAGTTGAGTTAATCCTATTACTGATCTCCCTAACACGGATTTTCTTTTCT
TGAAAAGGAGGCAGGACGGGTCTCGGCATATGCATCAATTGACACACAAAACAATTTTTA
GTATAATAAAAATCTAGGTTATATGTAAAAGTGCAAAAAGGAAAAACATTAGGCAAAAAG
ATTACGTATGTATGAGTCCAAAAAGTTATATGGAGTAATGACTTTGTTGCAAGAGGTGGA
ATTGGCGGGCTGATTGACACGAGTAGATCTACAATGTGGATGATGTGGTGATTATGTGCA
ATGAGAGCTCTATTGTTGTGGCACTCGATAATTGGAGCGTCGGTATTCGTCTGAGAGGCA
TAGTATGTGGTATGTAAAGATAACAAAGAAGAATTTATCTTGAGATGTGCTTGGGAGAGC
ATGACTTTGATTTAATGGTGTGCCCTGCTTAGGTCTAACGAGCCAAGCAAGGAAGAGAGT
TGAATCACTCGCTGACTTGTCGCTGGTTCTTTGAAGTACAGGACATGCACAATGGTTGAT
AAGATAGTCTTATTTTAAAACTTGCATATAATTGAAAGATGATAAAAAAAGAGTCTACAA
TGAATCATCTTTTAGCCTTATCTTTTATAATTAGTTATTCTTAAAAACATGATGAGACAT
ATTGTGCTAAGAGATCACCACTTGACTTCTCTTAAATAAGAGAAGGCAAAACTTTTTTTT
TTGAGTTCTCTCTCTTTCACTTCATCATTTATCCTATGTGGATTCGCTGGTCCACTTGTC
AACGCCATCATTTTGCGGGATAGAGAGAGGGACCAGGTTCAATTAATAATTCAGCAGCTA
CCCTTTTATAGTAACAAACATCAACAATTATGTGCTAGGGCTTTTTGCTGAGCCTCCCTT
TTGTGCATCTATTCTTTTAAATCAATTGAGGTATTTGTTAGGTTTTATTGTTACTGTAAT
TTCAGCCACTTCAGCTGACTTGTTGTACTTTTGTTCGCACAAACGTAAAAATCAAGATAA
ACATAAAATCGAGAGAAATCTCCTCAGGTTGTCTAAACAGACAAACATAGTAAAAGAGAG
ACTAGTTCAACACGTCTCATTTCTCTCTAACAAATAGTGCACTAGCTCAGTATTTTAGTG
ATTTATAAAACGTCTTATGATAGTTTATTTATAGAGGAAGTAGACCAATAGGACGATGGG
CGTGTTTTTTACAATTTAACTTTAATCATCAATACGACAAATAAGATTTAAGTTATGTGA
CTCGAAAATTATTACCAGGAAAGCCTCATTGGAGAGAAGAGAGCCAGCACCATTCCGTAT
GTCATGACGATAGTTCACCTAACATTTTCCTCTCTATAGAAATACAGGAGTACAGACAAG
GTACGTAGCAAACTCGTATACCTGTGAAGCACGGACGTACTGACGTACGTACTGTAGCGT
ATTCCCCAAAAAGATACTTGTACATACGTAGCCTTGACGAGTCTGAAAGTTCCTTCTCGA
TCAAAAAAACATTCCATGAAAAAGAAAGATATTTTCGAACACACAAAAAAAGAAAGATCA
AAGATGTTTTCCCGGGCTCTGGAACGTTCCAGGCCTTTAATATCCTCACACCCACGCTAA
CGCTCGCGCCGCCGGCCAACACAAACTAAATTATTCAGCGACGCCGGTTACTGGCCGGAT
GTGCCGCTGAATCCCGCCCACCGTCCCGGCGGCCAAGCAGCGTCGCGCCGCCACGCGTCT
TGTGGCGTGACAGCTGACTCCACTCCGCACCACACGTTTCGTCTCCGGTCGGCCGCGCTA
CGCACGACGGAAATATCCTTCCTATCGAGCTCGGTCCAATCCATCACGTCGTGGTGGATT
CCAGCGAATGGTCCACATACGTCAAAGGTAACTGGCCACACGTAAGCTCCATCCGCAGCA
ACACGCACGCCACCTCATCCTCGCTGCCTATATATAACTGCTGCGGCCGCCTCCCCTGCC
GATCCATCCATCCATTCTTGATTCTTCCTAGTTCCTACCGAGCTCTCACACAACTTATTA
CAACAACGCATAAGAGTAGAGCATCGACCGAAATCCAGTAGATCATCAGGAGGAGGAGCA
AATCCATCTCCATGGGAGCGGGGATGAAGCGCGCGAGGGAGGAGCAGCCAATGGTGTCGC
TCGCGCTGTCCCTCACCACGGACTCCTCGGCGTCCACCACGTTGTCGGACAACTCCTCCA
CCGGTGCGCCTAGGAAGAGGACGCGGCGGGGGAGGGTGGTGGCCACGTCGGGG