Contig Data
morexGenes
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Map Locations of contig_52371 (3932 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52371

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66977 1 958 bp MLOC_66977.1 Available Available None
MLOC_66976 1 688 bp MLOC_66976.1 Available Available None





CDS Structure of MLOC_66977






CDS Structure of MLOC_66976






Contig Sequence (3932 bp)

>contig_52371 3932 assembly3_WGSMorex_rbca.fasta
GGGGGTGGGGGGGTGGTGGTGACGGCGTAGTCGCTCTCCCCGTCGCACCGCGTGCGGGAG
GGGTCGGGTCTCATATGATTATTTGTGTTCATCATCATATCAGTACTGGTTAAGCACCTT
GTAGTTGATGGCATGCAGTCAGTAGAGGACTGGTAGAGGACTTGGAAGCCAACTGAATAG
GAGAACAGACGTTTGGAAAAATTCAAAATTCAACCTTTTTGGTTTGAAAAAATTCTGAAA
AAATGCAAGTAAAGAAGGATGTTATGTGCATGTGTGTAAAATTTTAGGATGAAATACCTT
GAAATACGATATGCACAAAAAAGACAAATTCATGGCCTGGAACGATGAATAGTATCGTAT
GTTAAAAAGCCTCAGATTTGTCTTTTTTATACACCCTCATTCCAATGTATTTTTTTTCTG
AAATTTACACACATGTGTGTTGCGCCCTCACTTATCTCTGTATTTTTTCAAAATGTAAAA
AAATGAATTTTCATGAAATTTGAATTTCAAATTTAAGGGCCTTCATGGAGGCCGAGCTCT
AAAAGCAATTTCCGACTGAATAGCCCATTTGAAGTTGTCAGTTGTCACTATTTCTCAGTT
CATCTGAACATACAATCTTCCTTTTAAGGAAAATCTTTTGCTCACAAAGTATTTTACCAA
GTGTACAAATGTGAATCCCTAGCTGCTGATTCTATCGTTCCTATGATTCAGGGCGGTGGC
TACGTTCCGAGAGGTATCAACACATCTTCCATTTCTGGTCACTACTCACTACCGCGCTAC
TGCGATTTCCCCCTTCATTCAGCACGAAGGAAAGGCTATTTTCTCTATGAGAATGTTATA
AGCAATGTCGGCCACCATTGCTACCTGAGCATCGTTTGGACTAGATGATATTCTGAAGAC
GTATCAATTTGTGCTGATCTTTCGTTCATGGTTTTGCTTATTGCGAGTGGTTCTAGTTGC
TTTTTGACTACCGCATTTCTTCTCCCATGCTTGTTAGTTTTCGTGTGTCAGGTGATGGTC
AAACCAATAGCGTGAACTTGTATGTGTTGCGTGCGAGATCGCCCGCACTCTTGAATCTGG
CTAGTGCAACCGTGCCCAAACTCAATCACATTTTTTTGGCAGAAGAACAAAGAAAAACTC
TACCTTGTTTGCTTGTCTTGTGCGAGCAAGTAGCAACACTTTATCTAAACTGAAAATTAC
GAAGCACTTGGAAAGGAGCAAAAAATAAATAGTTCAGAACGGAGCCCTGCGGTAGCATGG
GGCGTGTCTAATTTTTTTTAGAAAAAGCCTTCATGATAGACGTGGAGTATTTGAGCTCGA
GCTTAAGTGCACATGCATAAACAGTAAAAACAATTTTTTTATAAACATTTTAAATTTTTT
TGGATTTTTTTGTTTTTAAAAAAGCCTTCATGATGGACGTGGAGTATTTGAGTTCGAACT
AAAATGCACCCGCATGAACAGTAAAATCTATTTTTTTATAAAACATTTTAAAAAACTCTG
GATTTTTTTTATGAACTTTAACGAAAGTTCTAAGTGCTTCCAAATTTTTATTATAAGATC
ACATTTGAGTAAGGCGTGACAAAAAAAAAAACGATGCTCTAAAAATACTACTTTCGAAAG
CATTTTGAATCACTGATTTTCTTTTATCACGACTTACACAAATGTGATATCATGATGAAT
ATTTACAAGTACTTAGAACATTTGTCAAAGTTCATCACAAAAAATATTCAAAACTTTTAA
AAAATGTTTTTTTGATTTTATTGTTCACATAGGTGCATTTGAACTCGAGTTTAAAAGGAC
ACTTTCCCTTCATGACTAGCTTTATTAATAATCAACCGGGATTACATCATCCACCAAACT
GGAAACAATGCAGGTCCGGCCTCATCCGGAGCTGTGGAAAACTCGGCTTCCACTATTTGT
ATTTTGTAGTAGTACGAAATGAACACCACTTTCCGGCGACAGACGCTAGCGCACCCGATC
AGCGCCACCGGAGGGAGATAGATCGGCGCCAGCGGGCGGTTTCGTCGAACACTTTGTGGG
CAAAGACCCGCTGTCCTCTCCCGCTCACGCCTTGAAGGTGTTTGCGAGAATGTCTCTGTT
GCAGAGTATGCCGTGCCTTGTGACACTTGTTTGCAGAAAGAATTCAGAAGGCGATCGTCT
CATTCCATCGCAGTCGCAGATAAGACCAGTGCCAAGCTCGAGAATAAGTAAGTAAATGGT
AGTCCTAATTGTATTAATCATGTCCTAGCTAGTACATACTGAAAACAGCTTCGAATCCTA
ATTGTATTAATCATGTCCACCTAGCTAGTAGTACTACATACTGAAAACAGCTTCAAATTT
GCTGGACTTGCTTCAGCATAGTCCACCTAGCTACACACTGAAAACACTCTAGCGACCTAT
TCTTGCATGCATCCATTGGAGCATAGTCGAGCTAGCTGCATGCTGAAAACAACTTCAGTC
TTGCCGATCAATGGGCATCGGAGCGACTGTTCTTAGCTAGCTTGTGCTTGTAGAGGAAGG
TCGGCATGGGCAGCTCGCTCGGGTCCGGCGACAAGATGAATGTCGGGCCAGCAAAGCACG
ATGCCTCCGAATCCACCTCCATCTTAGTCAGAGGCTTCTTCTCAGACCGGTCGATCGAAG
GAGCGACGCTAGCGAAGAGTGATGCCTTCGACTCTGTCACCATCTCAGCTGGAGGCCTCG
GCTTCTTGCCGCACCGGTCCACGGATGGCGCGCGGCTCGCCGGCCTCTTCCAGTTTCCCC
TCGCCGGCGCCGTCTCCCCGCGCCCGCGGTCGAGGCTGTTCAAAGTCACGTCATGGCGGA
GCGTCTTGTCTCTGATCCAGCTTTGGCTCACCGAGGCGCGTCCGGGCTGCTGCTTCTTGG
CGTCCAGCTCCACTCGAGGCGCGTACACGGCAGGAGCAGGCGTGAGGGCGAGGCAGCGCG
TCGACGTCCAAGATGAAAACGCGGGCGTGGGCAGCAGCGGCGGCAGATCAACCCGGCCAG
CCATCGACGCACTGCACTACTAGGCTGCAAAAAAGACAGACACGCAGACAGACAAAGAAG
AGCAGACCAAGATCGAGCAATGGCAGCAGCACGGGCGCCAAATGAACAATAAAGCAATGC
AAGAATTATTAAATAAAATAAAAAAAACAGAGGATGGAAAAGAAGGAAGGAACGACTTGC
CAGGATGGATCGCTTCGCCAGAATCCAGACTGAAATCGCGCGCAAGGAGTGCTGGTACCC
CTACGACCGGATGATATATTAGCCATTCCGCCGCGTACAGACTACGCAAACCGAATCCGA
CTCGCACTCGAACTCCCGCCACGACCGTTGTGGCCGTGACATACCGCTTGGGCTGGGTGG
CAAAACTGCGAGCATGGGTGGGATTCGAACCCACGATTTCCTCCTTCGTTGTAGGAGTAC
ACCACATTAACCAATAGAAGCTAACCTATTTTTATACATGCTATGTCTTATTACTATACA
ATCATTCTCCTTTCCTTTTATTTCTTATTTTTTCCTTTTTATTATTTTTATCTTTTTGGA
ACTTTTTTGGGGGGTTTATATTATTTTTTCTTTTCTTTTTATGCTATATGCCTGAACTTT
TTCCAATTTTGTTAACTCTTTTTTCAAAATCTTTAAAATATCAAAATGGATGAGTTTGTT
TTTTCAAATTATTGAACTTTTTGAAATAGTTGATGCTTTTTTCAAAACCGATGATCTTTT
TCAAGATTGATGAACTTTTTTAATGTTTGTGTAGTTTTTCAATTCATGAACCTTTTTTTA
ATAGTCTAACTTCTCTTTCATGTTCGTGAACTTTTTTTGAAATCTGTTAACTTTCAAAGT
TTGTTCACATTATTTAAAGAAAATCATGTTTACCTAAAATATTTTCAAACAATTCAAAAA
TTACCCGGCTCAGTACCCGGTTCAAGCTCAAT