Map Locations of contig_52217 (3698 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_52217

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66871 1 1754 bp AK364085 Available Available None
MLOC_66872 1 273 bp None Available Available None





CDS Structure of MLOC_66871






CDS Structure of MLOC_66872






Contig Sequence (3698 bp)

>contig_52217 3698 assembly3_WGSMorex_rbca.fasta
TCTTTGTACGTATTAAATCTACATGCAAGCCGTATTAAATAGAAGACATGTAAAATCTTG
AACTGCGTTTTTGTAGGCTAAAATCATCTTTGATTGGATCGGAGCTACAAATACTTAAAT
TATAGAGAATTTTTTGTAAATTAAGAATGTATGATATTCTTTTTTCCGTTGCAACACACG
GGCTTTTTTTACTAATAAAAATCACAGAGTCCATGGCACGAACAAAACCAGTCCCCACCT
ACTACGCTTCACCTCTGCGCATGGAGCTCATCCGAATCAACCCGTCATCCCCAACGTTCA
CGGTCGCCGTCGCCAGCTCGTACGCCTCGAGCTTGGCCACCTTCACCGCACCAGTCCCGT
TGTTGAACACGTACAGGTGGCCGTTGCCGTTCTGGGCGTGCTCAGGGTACACCCGCGCCG
TGATGCACGTCCGGCCGCCGCCGCCGAAACTCTCCACCACCGAGTGGTCAACCTATTCAA
AAAATAACAACTCGTCACTCGATTTAATTTTTCAGTTCGTCCATTCATCTGATTCATCTG
ACAAAGTTGAGGACGAGGAATTTACCAATGTTCTGAGCGAGATGCTCCTCCCGTGCTCCT
CGATGTCCATGTCCACGAAAGCCCCGTACGGTGGCTTGTACACCCCGGCTCTCGTAGTTG
ACCTACTCAGGTCGGTGCACATGAGCACCTTGTACTTGTCATGGTGCCTGAACACCCTGA
AGAAGACGGCGGTGTGCTCCTGCAGGTCGCCGGAGGCCATGACGAGCAGCCCGAACGGGC
CGACCCCGCCCGGCACGGACGCTCCCTTCTCCCCGCACAGCCTCTGCGGATCGACCAGCC
AGTTGGGCTCGAAGCTCTCGGCTCCCTCCAGTGTCGGGATCTGGAAGACCACCTCCACGT
CCGCCTGCGTGCCCGCGACGCCGACGATCTCGTTCACGCCGCCGGAGTTCAGCTCCGCTC
CCAGCAAGCGCACTCGTTTGCTCCTCAGCGTCTTGATCTCCTCGACCGGCCATTGCCTTA
GCTGCTTCCCGTCGTTGTCCAGCCAAACCTTCCGTGGGAAGATCTGCAGCGTAGGAGATA
ACATGTCACTATGTCAGGTCAGCACGATAATTGACAAAATTTGGTCCGAGGAAGGCGGTG
GCGACGGACCTGGACGCCGGACCAGCCCCGGGCGACGTCGTCGGCCTGGCTGTCGGTCTC
GTTGGCCCACGCCCAGAGCACGCGCCGGTTCTTGCGCGCGTCGAAGAAGGACTTGGACGC
GTACACGTGGCCGTAGTCGAGGCGGCGCCAGCTCCGGCAGTCGTCGCCGTCCTCCTCCGG
TACGAAGGTGTCCATCGTGTCATTGTAACGCCCGACCGCATAGTAGTCCTGGAACGTGTC
TATCGCGCTCAGCTTCAGCACGTGCCTCACCCCGGTGCCGGTCCTCGGCGCGTGGTCGAG
CCCCACCTCCACGCCGGGCTCCGCCACCGGGAACAGGTCCGGGCACTCCACCATGCCGGC
GGCGCGTGACTCTTGCAGCGGCGCGGCGTTCCGGTCCCAGCGCCGGAAGTCCTTGCTCCG
GTAGATGAGCGTGGACCCCACGGCGTTACCGACCTTGGCGGAGACGGCGACGCGCCACAG
ACCGTCGCGGCCGAGCCACGCCGTGGAAGGGTCGCGGAAGAAATCCACTGGGACGTCAGC
GGGGAGCGGGATGACGGGGTTGTAGCTCGGCTTCACCCACTCGCGGAGGAGCGGGTCGGA
CGCGTTCTTGGGGAAGGCCACGTTCTGGACCTGCTCGCCGTCGACGCTGATGCCGGTGTA
GAGGATGGCCGGGACGCCGCCGGGGAGGATGGTCGCTGAGCCCGACCAGCAGCCGTTGGC
GTCGAACGGCGATGTGGGCTCGAGCGCGTTGCCGACGTCGGCCCAGTTCACGAGGTCGCC
GGAGACGGAGTGGCCCCAGGAGAGGTTGCCGACGCCCCAGGTGGCGCCGTGCGGGTTGTA
CTGGTAGAACAGGTGGTACACGCCATTGTGGTACATGGGACCTGTCCGTGCCGACCGATG
AGCAAAGATTTAAAGTTTCCTCTAGTGATCAAGCAACGACTATTCTGACAACATAGATGG
CAGAGAGAAGGAAGGAAAGTAGGCACCATTCGGGTCTGCTCAGCAGTGTCACCATGGATC
CATCCGAACCAGCAATGCCGCCATGATCGGAGAAGCGCAAGGATCAATCAGAATCCATTC
CTCAGAAAGGGATTAGCCAAGTCCATCCACAACTGGGTGTAGCGACAATGCAGCAAATTA
AAAGGCGCTAAGTCGTACCGTTCTGCCAGTTCTTGGCGGGCTGGAAGTGGTAGGCGGTCC
TGGCAGCGCCATGGGGCGCCGAGTCCGATCTCTCCGCTTGGGAAGCAACCAGGAGAGAGG
AAGACGAAGAGAAGACAAGGAGGAGATGGAAGAAGGCCACGCACGCGGCGCGAGAGAGCA
CAGCCATGGCCACCGTTGGACGAGGCCAAAAGCTGCTTACTCTGCCGTTGCTCTGCTTCG
GGATCCAGATTTATTATTAGTGCCCCCTCAAGTCTCCAGGTCTCCAAGTTTAATTCAAGT
TTAGGACTTGCCGCCATGTTCTCTGCGGCATTGTTAGTACGAAAGGCAATTTCCTATGTA
AATATGCCTCGGATGCTCGTGGAATCGAGGCTGTAGGATCTTATTCTAATCACCTGCAGT
TTTTGTTTTCTTGATATTTTTACTTTCAGGATCTGACCATCTAAGAGCAACTTCAACGGA
TCGACCCAAACGGACAGCGATTTCATCCGTTTTTTTGTCCGTTTGGGTCGACCTCCTGCC
CGGTGTTCGTCCTGTTTTAGATATGATTCGGCAACGCGCCCAACGCGCCGACCCATATGT
GCCTTGATTTTCATAGTTTGAATCAAATAACATAATTTGGACCGAAAATAGCATAGTTAT
TACAAGCCGAATATAAATAAAAATTTCTCACATAATTCTCACATAGTTTTGCAAAAGAAT
AAAAAAAAGATAAATCTATTGGTTGTCAACATGAGCCCACATATGTTCAACCAAATCATT
TTACAGTTGCATGTAAGTTTCCCAATCACGCATGTCTTGATGAAATTGGTTGAACTGTTC
AAATGTTGCCGCTCCTCCATGCTCAGGCACAACATTCTCACCATGAAACTAAAACCCCTT
GATCGTACAGACGTTCCGGACGCTCGTCTTCTACGATCATATTACGCATGATCACACAAG
CAGTCATCATCTTCACAGTTCCTGCGTGCTCCAGGTATTAGCAGGATACCGAACGATGCC
CCATTGAGATTGCAAAACACCAAAGGCACGCTCGACATCCTTCCTAGCACCCTCTTGCTA
TTGGGCAAATTTTTTCCTCTTCTCTCCGACAGGGTTCGGTATTGTCTTGACAATAGTAGT
CCACTGAGGATAGATATCGTCACCCATGTAGTATCCTTTGTTGTAGTTGTGGCCGTTGAC
AGTAAAGTTATCGGTGGGTTGTTGCCTTCGACAAGCCTAGCAAACACCGTCGAGCGCTGA
AGCATGTTAATATCATTGTGTGATTCGGCCATGCCAAAAAAAAGTGCCAGATCCAGAGAT
CTTCAGACGCCACGACCTCTAGTATGACAGTGCAAGCCTTGACATAGCCCATATACTGCC
CTTGCCAAGCAGAAGGGCAGTTCTTCCACTCCCAGTGC