Contig Data
morexGenes
Links



Map Locations of contig_52188 (3546 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52188

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66854 1 176 bp None Available Available None
MLOC_66855 3 1758 bp MLOC_66855.2 Available Available LOC_Os07g08820.1, FRAME:-1, EVALUE:9e-51, 13107.m00877 protein C-Myc-binding protein, putative, expressed





CDS Structure of MLOC_66854






CDS Structure of MLOC_66855






Contig Sequence (3546 bp)

>contig_52188 3546 assembly3_WGSMorex_rbca.fasta
TTATAGTTGTAATATGGTCTTTTAGTCCATGTTAAGTCCTAGGAACCAAACAGGCAAGAA
CTTTTTAGGGACTTAGGACTTATAAGTTGGGATTAAAAAAAGTTCTAGGACTTATGAACC
AAACAGGGCCTTATTCGAGGATTGTTTCTTGAAATTCTATGGAACTAGTGTTCCCACCAC
GGGCTGATTTGGCGTGACAATATGCGGTCCGTCGGATGAAGTGAACTAATCTTGACGCAT
GGATGCGTCACCATGTCAGCTGTTGTGACCATTCGCTTGTCATGGCAACCGCGCGAACGA
GCCACCATCACCCCCGTCCTCGCCCCAATCCCCTCTCACTCTTCGCATGCTCATGTGATT
CTGCGCGGCGGCTCTCCATCTTCCTGGCAATTCACGTGTCATAGGATACTAGAATAGAAT
CTGCTCTTTAGGTGAGATCATAGGATCAACCCAAAAATAATAATATTTAGATAATTTGAA
AATTTTCTGGAATTATTGATAACATACCTATGGTGTATGTCTATAAGTCCAAAAAAAATC
AGCTCAAAACTCAATATGCAGTGAGACATACAAAAATTACAAATCCAACTATGAATAGTG
TCAGCTTTGGGTGAATGGTGAATAGAACAGACACAATTCAGATCCGATTTGGTCTTTTTT
ATTTCCACAAGTTGGGTCGAATTAGGAGCTGAAACTTTTTGATATTGTACATCAAACATG
GATATGTGCCCACAAATATTTTCAGAATTTTTAAACAAGTTTTCTAATTTTTTTTTAAAT
GATCTCACCTAAAGCCAGATCCTATACTATTTGCCCCCCTGCTTTTGTCACTCATGGCAA
ATGTTATTTACTCTTAACGGCACGACTAATTTCTAATTTTATACATGGATAGTTTCAAAC
TATGTACAGAACCAAAATTTGGGAAGTCATAAACATGCTGGCCAAGCAATTTTAGCTATT
AACCATGTGATTTATACATGGCAAAAGCTTTTATGTTACAACACAAACAGTAGCGTTGCT
TTGCAACATCAAACTTTGCTCTCTCTCAGGCAAATTTAGCAACTTGGAGTTGATCCGACT
CTTCAATGTGAATCATAGTGCTTAAGTTCAGCTTTGCCCATGAAGGTGTTGGAATTTCTG
GTCCTGAGTGGAACATGCACGACATTGAAAGGCATTAAGGAGTGTATAATGCATTACATC
ACATGGTTGGCAAAGTTTAGCCAAGAAATGATCCTTTTTTACATGACTTGGTGATCCATA
TTGAAGAGGCATATATATTTGCTTGGTGGCACCTATGATGTCAACACCTGTTGGTTCCAT
TAATTCCAAGGTGCGTCGATCTTCAAATTCTTAAGTTCCTCCAACTGCAAATAGCAATGT
ATATTAATGGTTGGGTCCATTTCTAACAAGACCATCTCCTGCAGTTCATCCTTCAAATGT
AAACTTTGCTTTGACTAGAAATGGTAAGGTAACTATTTCCATCTAGATGATCTACAAACA
CTATTTAACCTAGCAGAACTTATTTTTCTGTAGCTTTGCTAATAACTATACTTAACAAGT
AAATCAGCTTGTACAGATATTCCCATGGCAACGTGCGGTGCGAGCACACCACGGCGCACA
CAGCCCAGCCCGCCATTCAGCTGCCCTAGTGCTAGTTACTCCAACTTAGTCACATAGCTA
TTTCACAACTTTGTAATATTCAAATATGCATTAGAAACTGAGAATCCCATGTAAATAGGT
AAAGTGGCATTGCATAATTTGTACTCCTGTATGGCATTAGGAGTATTTTGCAAACATGAT
AGCGTGTTTACCTGCCTACTTGTTTCCTTGTGAGTCTCTAAAAGCTCATTATACTTCAGT
TGCAAATCCAACTTCTCGGCTTTGAGCTTTTCATAATCGGAAATCGACGGACCGCCCAAT
TTCTGCTGAACAAACCTGAGATATATGAGCATGCTTAGTAGTTAGTCCTAGCATGAATAT
CAACACAGACACATTACTTTGATGCCAAAATTTAAATCAACTCACTCGACTGCAGATGAT
GGCTTGTCATTCTCCTCATACAAAGAAACAAGGGCTGGACATCATAGAAAGTAGACATAA
GTAGCCAGCGCGTGACCGCAATTTATCGAGATATACTTCGCCAAACCTTTGGTGAGAGTA
TCGAGCACACCGCTGGACTCAAGGTACTTCCTGAAACCTTCTTTCTTGGCTTCTCTATCC
TAAAAAGACCATAACACTACGATTCATAACCATTATTTGGGAAGCAAATTACATGATAAG
TATGTTGTACCTTCTTTTCTTTTTTTTTGAAAGGAATATGTTGTACCTTCAGGAACTCTC
GTTTTTGCCTTTTAACTTACAGACTTGCTAAACAAAGCAAACATGTGAAATTATCTGCCC
CATTCTATGCTACAACTCCGCAGTAAAAAAAAAAAAAACTCCGAGCATATCATCGGATAT
TCAGCCATTTTTAAGCTGAAACTGCCAGAGCAAGACAGAAATCATATTCCTCCAGGCAAA
CCAGAGAAAACTTCACCAAATCTTCCTCCCAAACTGGAAATTGCATGTTTTATGAATGTT
GACCAGCTGCCGTCCACACAGCAAATTCAGTCACAGACAGAATAGAACCAACAAGCCAGT
CGCATTTTCCTAGTCAAAAAAAAAAAAAAAGATCCAAAGTGATACACTAACTAGTCTTCC
ATAAATCACAGTGTTCTACCAGCTGCAGTCTCATAAATCACAGCGATCCACTGGGGTACC
GCATTTGACCACCATAGCCATGCTACACTAATCCACAGGATGTTCTGCTAAAGCTAGGGA
GACGCAGCGTGTTTGGCTTATCCAAGAACGCGCGGGGTGGTCGGAGAGAGTCGGGGGAGG
GAGGAAAAGTACCATCTCGACAGCAGATCCGGGAGAGATTGGGAGCGAATCTGCGGCGGA
GCTCTCGTCGGCGGAGAATGGCGTGGGGGACGCTGCCGGCCGCACGGATCTGCCGCCTTG
AGTTGAGCTGGTGGTACTGTGCTGTGCTACACTACGGAAGAGTTCGAGACTGATACTTTT
TCTTTTCTTTAAGGCTAGGAAGAGTTCGAGATTTCTTTTCAGGAATCGGAAGAGCTCGAG
ACGAGAGTGATAGTGATGAGACTTGGGCCAGGCCGGGTCGGGCCAACACACTACACACTT
AATTTTCGTATTCTCAGGAATCTTTGACTTTTAAGCCTTGACTATATGTTTGATCTTTCT
AAAAAACAGACTAGATGCTTGATCTTTCTAAAAAAAAGACTATATGCTTGATATCGGGCA
TATTTAAAGGGGCTGCCAGACATCCATCGGTGGATTTGTAGTAATCATCCATCACCCTTT
TAGCCGTCCGATGTACGCGCGTGCACCGTTAGATTACCAGCTCGGTCGCCTCCGTTTACC
ACATAAAAATCCTGAAACAACGCTCCAGTTGCAAAAACAAGCACGCTGCTACACATCCGG
CTGACGGGTTAAAATATGGCTGACGGGTCTTTTGCAACACAGATTATGTTGCAATTTTTT
TTGCAA