Contig Data
morexGenes
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Map Locations of contig_52173 (4585 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52173

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66845 4 1281 bp AK368404 Available Available None
MLOC_66844 1 248 bp None Available Available None





CDS Structure of MLOC_66845






CDS Structure of MLOC_66844






Contig Sequence (4585 bp)

>contig_52173 4585 assembly3_WGSMorex_rbca.fasta
AGTACATACGACGGAGACGTATCACACGTCACCAGAGCACACTTCCTCGTCGCCATGGGC
CTCATATCCGCGCACACCCAGGGACGTCCACGCGAAGCCACATAGCGCAGACACCCACGG
GCCGCACCCCTTGCGCCCGAAGCCGCCGCTCGAGCGCCGTATAGGCCGCTCAAAGCCCCT
CCACCATGGGCTCCGCCAGGACTGGGCACAAGCACCACAACAGTCCTCCACCACGCAACA
ACAGGTCGTCACCGTTGCCACGACCACCGAACAAGCCACCACGCAGCCGCCGCAGCCGCC
CGCAACTCGCAGAGGCCATCTCAGTCCACCCGACATGCAGTCCAGTAGATCACCAACGAG
ACCACCTCCCATGCCTCCTCGGGCCTCCGAGCCGCGCCCAAGCGCCAGATCCACATTGCT
TGGAGCCCATCTGCGCCCTCACCGTACCCTGCGAGCGCTCGCCGCACCACCGTGCGCGGC
AATGACTGGCTGCCCATCGTGACCACCATGAGCTAGCCCACGACCGAACTGCAGCTGCAG
CTCACCTCAGCGTTGCCTCGCTGCTGCCTGACTTCGCGATCCGCATCACATCGCAGCTCC
TCCGCGCCGCCTTGTTCCTTAGTGAGCCAAGGCCTCACTGGAGCCCCGCAACCGTTTCTG
TGCGCAGCCCCTGGACCTCATCCCCTTGCCGGTGCTTGAGGCCACTAGATTCGCCATTGT
TGTGCTGCCAAACGGCCCCACCGCTTCTGCGCACATCCCCTGAAGCTCATCCCCTCGACG
GTGCTTGTGGCCACCAGATTCGCCGCCGCTGCGCCGCCAAACGGCCCCACCGCTACTGCA
CGCAGCCCGTGAAGCTCATCCCCTCGCCGGTGCTTGATGCCACCAGATCCGTCTGTTGCT
GCGCTGCCAAACGGCCCCATCGCTGCTGCGCGTAGCCCTTGGAGCTCATCCCCTCGTCGG
TGCTTGAGGCCACGAGATCCGCCGCCGCTGCTTCACCCAATAATTTAAGGCAACATAAGT
ACGACTGGTTTGGTCTCTCAAAGATGCTCATAGAGTAAGCAGACTTTTTTTTAGGAAATG
GGTCCAATTATACTAAACTTTTGCACTTGCCATGTAAGCCAAATGGTCCTTCGAGATTTT
AGAATTCTAAGTTAGCCAAGGAGCATAAAATTAAGGTCTCCTTTGGTTTATATGATAGGG
TTATCATAGGAATAGGAAATTTGTAGGAAATGAGATGACATGCATCTCAAATCCTATGAA
TAAGATTAGGAAAAGAGACGTCATTTGGTTCACATCATAGGAATTTTTCCATTGAGCCTA
TTTTTTTTATATTTTCCTTTAAAATGTACAGGATGGGAACCAGTCCTATGTGGGAATAGA
AATGCATTCCTTTAGACTAAAGGGCTCTAAAGAAAAAAAATCCTACAAGAACCCTATCCT
ATGGAATTCCAGTGAACTCCTCCAAACTAAAGGAGGCCTCATCGGTAGATATCTGTGTGC
GTTCGTAGAAATGAATGTGCGTGTGGTCTACAAGTTTTTTAATAAAAAATACTACTAACA
CTTGCACGTAGCGTTCCAATTTTTCCTGTCAGGAAATCAAGATTTATGCAAACTACACGT
GACAAGGACATTCAAGTCTGTATCTTATTTTATTTAGTGACAAATCAGTGACATGTACAG
ATTTATTTTCAGAAATCAGAAGGTAGCTAAGCATGTACAGAGCTCGTGATGGATAGACAC
GAATCTTTTGGCTGGAGATGAGCCTGGTAAATATATATACATGGAGACGAGGTGATGGCT
ACTGGTCATGGTCTGAACTCTGAAGGGAGTCCTCCCTTGGTCATGGCGATGAGCCGGCAA
GGTACTGCAGCCACTCTTCAGGCAGGCCGTGCCTCCTCCTGATCGTCCTGAAGGCGGATT
TCGTCAAGGGCACCGCGATGATGTCGAATTCCTTAGGCCCCTGCGGTGCAATTCAGCAAG
AATTATACTCTTCTTAAAATATGGGACAGTTCGGTAATTAACTGCACTTCTCAAATATTG
CAGTATTACTCAAGATTCAGGAAGAGCAAGCGATGCCACAGACCTTGGGGATCTTGCGTA
GCTTCATGTTTGCTTGCAGCAGCGTCTTGTTACCCTTCCTGGAGTTGCATCTAGAGCATG
CAGTCACCTAACAATTCAGAGATGGCAAAACAACTTTGTAAGACTCTTTTTTTTCTTTTT
CTTTTTTTGCGAAAGAACTTTGTAAAACTCTTTAACTGTCAGTACTCCATAAGAGGACTT
TTCAGTGAAGTCCTGGTTTTCTTCTTGATTTCAGGGAGGGTAATAAGATGGTAGAAATAG
TGAGAATTCATACCAAGTTCTCCCATTCCCATTTGCCGCCACGCGAGGCCGGGATGACAT
GATCAATCGTGAGGTCATCTTCAGAAGAGCAATACCTGCAGTGCAGTGCAGACAGTGCGG
CCAATTAACTCGTGGTTATCCATGAAGATCTAGCGTTATACGAAAGGATTTTTAGGCTTT
AGAAACAGTACAATGCTACTAGTACTTCCCTAAAAAAACAGGGGAATGCTTACTGGCAAC
TGAATCCATCCCTGAAGAGTATGTTTTTCCGGCTAAGGCAGTGCTTGACTCTCCTCCTCT
TTACAACTTGCAGTAGCTGTGGAACCTGACGAACAAGACGATATATAGCAGTGAAAACAG
TTCAATTCCATCAGGAAACCGGGGAAATTTCAATTCCCGGCGTCGGAAAACAGGGTCTAA
GTGACTGACAGATCGATGGATCGCCCCACATACCCTGAGAACCGCGGGGATGTAGAAGGA
CCCCCTGGGAGAAGAGACCGTCTGATCGTAGTACTCCAGAACATCGGCCTGCATGGCTAA
AACGATCACTGTATTAGCAGCTTGTTTCACGATGTAAATTTTGATCAGCAGCGGGATGAT
GAGGGTGATGAGGAACTGCCGGCTGCGCTGCATTGCAGTGGAGAAGCTAACCTTCTCCAT
GAACTCCAGGCAGATCGCGCGCTTCCAGCAGACGACATTGACAGGCCTGCGCGTAAGTTC
AGAACCGTTTCAAGATGCCACTCAAAAAAGCAGGAGCTCATGGCATAACAGCGTGAACAC
AAGGGCCGTAACCTCGGTTGCTTATGCTAATCACAATTCTTAGCTGAAATTACCCCGAGC
CGTAAGCACAGTAATTACTAGTAAAGAGTGCGTGTTTATATTACCTGTAGGAGAGATCAA
GAACGAGCCCCCGGAACCCGGACAGATCGTCGTCGCCGAACTCGTCATCATCCTCCTCGC
CGTCGACGATCAGCACGGCATCCGCCTCCTCCGACTCCTCGGCGCGCTCGTCTTCATCCA
TGGTGGCGGCGCCCCGCCGTCTGTCGGACCGGTTGTTCCCCCCCCGCGCACGCGCGGGCC
ACGGCGGCGCCACGAGCCTGCGGGAGCCGTCGCGCCAGCCCAGCCCGGCCAGCGCGCCGG
GCAGCCCGCACCTCGGCGACCGCCGGCCGAGCGGGCCACGCAGGTCGCGGCGGAACGGGA
GCGGGGACGCCACCTTGGCCGCCATCGATCGGTCGGTGCTTGCTCGCTGCGTGCGCGATC
ACGGAAGGTTTCGTGCGATTTTTCTCCAGTCCTCCCTTGTCTTGTAGCCTGGGAGGTTGG
GGGGCACTGCACCGCTGCTTTGGAGCGTAGGAGGAGGCAGAGCGCCGAGAGCCACTGGTT
GGTTACCGTGGAAACCATGGACGAAATATCTCCCTCCATTTTCATTTTATTTGACCTGCT
GCATTTTCGTGACAATTTTATTTTCAGACTAGCATGACAATTCCTTCCTACACAAGGCAT
TTTTTTTTCTTTCGTAAAACTATCATGAGGTGTGACAATTTCTTCAGAGACTAGCATTAC
AACTCCTTCCTAGAGAAGGCATTTTTTTTCTTCAAAACTGTCATCGTTTGATCTCGATCA
AACAGCTATGAGGGCGTTCGCCGGTGGTTCCTTCCTAGCAAACATTCGCCGGTTATCTTT
ATCGATATTCTTTTGGGCAGCCCTAGTTGGCTCATCCCCCACACAACATTGGTTTACCTT
AACGAAAAAGATTTTCCATCGCTTTGTATTACAAAGCAATCAACCCCGATTACAGAGCAA
ACGCTGTGGCGATCAGCACAACAAACCAAAAGAAACAAAAGAGAAAAAAAATAATGCCAA
CACCAGCACCTCGACAAAGCACGGATGCACCGCAACCGCTGCGCCCTCCTGAATCTACCC
ACCATGATCCAAGGCTCCGATCCTCCACGTATCAAGCAACACCTCCAACAAGGGATGCGA
TGACGCTGCTGCCCGAACGTGTCCTAGGGTTTTCCCCGGTATGCGGAGGGGAGTCGGGGA
TGGAGACCGCCGACACCCTCCACGAAGGAATGGTGGCACCCGCAGGCGTCACCACATCAT
AGTCGGATAAACCGGCAAGGATTTCTCTCGCACTCCAAACCCCGCCGCCCTACCGGACCG
GAGCCAACCAGCTAACCCACCGCCCACCAGCATGCGCCACCGCGGTCGCGACGCCACCCA
CGCTGCCTCACTGAGATCACCACCA