| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_52107
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_66786 |
5 |
1195 bp |
MLOC_66786.5 |
Available |
Available |
LOC_Os07g47620.1, FRAME:-1, EVALUE:2e-39, 13107.m05077 protein universal stress protein domain containing protein, putative, expressed |
CDS Structure of MLOC_66786
Contig Sequence (3074 bp)
>contig_52107 3074 assembly3_WGSMorex_rbca.fasta
GTAGGAAGGGGTGAAGGGGGTGCCGGCGGCGGCGCGCGGCGGGGCGAAGGTGGCGCGGTG
GAGAGAGAGCGACGCGAGCGCTCGAGTGTGCAGCGCATTGAAGCGGACGCACCTAATAAG
CAGCGCGTGATGCCGATTGCGACCGCGCGCTGTACTCTTTATGCCGCGCGCGCGTTTATC
ACGGGACCGCTGGAGCAACTTTTTTTATTGTGCGCGTTAAAAAAGCGATTTTGCAGCGCG
GCGCTATTTTAACGCGGCTGTTGGAGATGCTCTAATTTTAAAATTGAGGTTCATTAAGGT
TCTCTTGAATGCATTATCGTCATGTAATATCCTCTTAGGTTAAAGGTATCAAGCTCATCT
CTGTCCAGGTGTTTGTTATCAATGGTGCAATGGCCCGAAATGACCACCCGAAGAGATAAA
TGTACACTCAATAATCCTTCAACTTCTACCGGGTTAATGGTGCAAACAAGTGCAGCAAAC
GGCGATGATACCAGAAGATGAGCCCAATTAAAGCATCATGTACAGACATTAGGAGGATCG
AACAAATAAAGCAGTAATTAGGCAGGGATACAGTGCAGTGCAGTGCAGTTCGTGTGGCAC
GCAAATGTCACAATGCCAACACCGGAGCTGGAAATGGCGATCATTCCTTGGGCTTTGGCT
GCTTGACTATCATCACCGAGCAGTGCGCGTGGTGGGCGCAGTAGTCGCTCACGCTCCCGA
GGAATGCCCTGCGAGAATTGCCCAGGGTTGAGGCAAAATCAATGACCACTAGCTCTGCAC
TGCAGCACCGGGAGACTGGAGAATGGAGATGAATAAATCCCATCAACTACGTACTGTACC
TCTTGATGGCGCCGTAGCCATGGCTGCCGACGACGAGCAGGTCGGCGTGGTGCTTCTCCA
CGGCGTTGCAGAGCACGTACCTCGGCTCCCCGTCGATCACCTCCACCACACCCTGCACCT
GCGATCCATCCCGTACGTGACTGTTAGGCAGAGCAGAATTAATCGGCGTGATCTCGATTT
GGCAGCAGCGGTGGTACCGAGTTGGCGGCGCAGAGGCGGCGAGCCCTGTCGACGACCTCG
TCGGCCCTCCTGCGCAGGTCCGCATCCACGTACCTCACCACGTCCCCGGCGGCGGCTGAA
ACCGATCGGTCCCCAGAAATCAGCGCTCCGGCCAGTTCAGATAACCAAGAATTAGTAGTA
CCAGGGAGGGGATCGCGGACGGCACGTACCGGGGCCGCCGAGGGTGACGACGGAGGACAC
GGCCGGCTTGGCGTGGACGACGACGAGCTCCGCCGCGGCCCCGGCGCCGGCCGTCTCCGC
CACGTAACGCACGGCCCACTCGAGCGCGCGGTAGCTGTGGTCGCTGTCGTCCACGCCGAC
CAGCACCACCGTCTTGCCCCTCCCCTCCTCCGCCGGACCCGCCGCGGCCGCCTCGGCCTC
AGCCATCGTACGCGGCAGTCAACGACGCGAGGATTAAAAAATGATGAGAGTAGGTTTCTT
GGCTCGGTCTGCTGTGGTTTGCTTGCCGTCCTAGCTGCAGGACGATGCCTATATAATGAT
GTGAGCTGGAGCAGAGCACCGACGAAACCGCGGAGGCCAAGTTGCGTGTGGCCGCGGAGT
GACCTGACCGGAGATAATGGATACCGGTGGCACGCTGCCCCGGTTTCCGTTTGGTTTTGC
TTCTTGCCCCTTCTCGATCGATCCTCATCTTCCCGCTGGACTGGACCTGGATGGCGACGG
CGACGACGGCGACGGCGCGGAGCATGGTGACTGTTTCTGTTCGCTCGGTGCGTGCTGATT
GGTGACGCACCCATGCGTGTTGAGGTAGCTACTCTTTTTCTTTTTCCGCCAATAACGAGG
CAACGTCGTTCCTTGGTGGCCTGGTGAGGCCATCCCAGCGAACGAAGGAGGCTCTGTTAG
GCGAGGATAGTTTGAGGGGAAAAGCCTTTTTCGTTCGCGTTTCATCCACAACGCCTATCT
CCACCATCCAAACGTGTCATGTTCGGACATGTCGTGTAAGAAAGTTGACAAAGGCATCTG
GAGAACCCCTTCCTTTTCGTTCGCATGCATGTGAGGTAGTAGGTGTACTGTTGCTAGATG
CTTGCACGACCCCATTGCATCTCCAGCTCATTACAAGAGTAATTTCGGTGATTATCTTTG
ACGGCGGCTGTAGACTAGCACACAAACACGTTTTAAATGCCATGAAATTAAGATATTATG
TTGTTTAAATTATTCTGAATGAATGTTCTCTGAATATTTTTTTTTTAAAACTTTGTTATG
TTGGTCTCCGAACTCTGCCATGAAAAGCAAAAGAACTTTTGAAAAACCCTGGCATAACTC
ATAACTTTTGGAAAATAGTTAGAGAACTTTATTAACTCTTCAAAAGTTCTTCTGATTTTA
TTGCAAAGTTCTTCTAATTTTATTGCAAAGTTCGAACACACCATTCATAGAGTTCTTAAG
AAATGTATACTTGTGAATTAGTGGTTAGTTATGCATATCAAATAAAATTTCTATGCATAT
GATAAAATTAACAAATAGACTATTAATCTGTCCACATCAGAGTAATTAGCAATGAGCATG
GGATGAAAGGGTGCAGGAAATGCGGAGTACCTAGTAAAAAAGCTGACATGTGCAGATTCT
ATAGCACGTGGCCTCACGTTTGAGTGGACCCACCGCGTCCTTCGCTTGCATGCATCGCCC
ATCCTAATGCACAGAAGAGCAGCTTGGATTCCCGCTGTGAATGAAACGCAAACGACAAAA
AACGCGTCCTCAAACGCGACATGTGCAGCTAGTAAAGCTTCCAACTTTGAGGCTTGTTCC
CTTGTCAAACACTCTTCTTACAAGAGCATCTTCAGCCGTGTGCCCAACATCACCTCTCCA
GCCTTTTTTTCGCCAGTGAGGGTAAAACGGCCCAGTCGCGTTCCAGCAGCCGGTTTTTCG
TCAGTTAGAGCCGAAATTGGCCCCGGCGGTCCCAGCCCGAACCCAGCACGCTGGGGGCGC
CCAGGGATGCCGGCGGAAAGAAAAACGACGTGTCACGCCCTGAGACAAGGTCATCACGAA
CCTCCGGAGCACCG
