Contig Data
morexGenes
Links



Map Locations of contig_51984 (4804 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51984

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66700 1 1407 bp AK366970 Available Available None





CDS Structure of MLOC_66700






Contig Sequence (4804 bp)

>contig_51984 4804 assembly3_WGSMorex_rbca.fasta
CGGCCCAGCAATCCCTCCCGCCGTCTCTTGAGCGGGCATAGGAGGCCTTGGCTTCCTCCC
TCCACCTCTGCCCGCCCAATTCTGTCGGAAGCCCCCTCTCTTGTGATGAGAAGGTCCCGA
CGTCCCCGGCACAAAATTCCCCGGCGGTGCAGTAAAAGTCTGGTTGCTAGGCCCATGTTC
ATAGCTGCATGCCCACGGCCGCCACCATAAGATGATGACCCGCGGTATTGACCCTCCCCA
TACGTGTTGTCGCCGTCATTGCCCCAGCGACCTCTGATCCCCAGGCCCCCCCACCTGACC
GGGAGCCCCGGGTTGTCTTCCTGCCTACGCAGCGCCAGGAGGACGCGCCATCTGCGCAGC
AGCAGGTTGCTTTGCATTAGAGGGGCGATCCCCCTGTCTAGACGGTCGAGGCTGCGCAAC
CGGTGGTTGCTTGGAAGCGCCCCTGCCTGCCATGTTCGTGACAGCAGAAGGAGGAGGCGG
CACCCGCGCAGCTCCTCCAGTACCCAACGACGGGAAGCCGCGCTACTGTCGCCAAGGAAC
CCTAGGTCCAGGCGACCCCGTGCATGGGAGAGAACCCTCATGATGTAACCCGCCCAGGCC
AGCCGATCGAACGGGAGTATCTACCGTGGACATAGCTATCGCCTGGGCCATATACCCAGG
ACTCGAGCTGTCCGACTTGGACTTGTCCAGGACAGGGCTTTCCTCTTGGGCCATATACCC
ATTATTGTTTACATTGATAGAGTCCAATACGAAACCAGCAGCCACCGTCGCCGATTTCAA
AAACGACTCCCTTTGGAATCGCATCTCAGGCTGCGTGAATCTCGGCTCGGTAACAGGCGC
TGACTCCGTGATCTTCGGACTTACCATCTTGTTCTTCTTCTTGCCCTTGACTACGCACCA
GCACGCCGTCGGGAAGAAATCGGACAAGGTAATCGGTGCTAGTTTCCCTGCTGGCAAGGG
GCCAATCCAAGGACGGACCTTGTGCTTCGCCATATCCTTCTTCGGGCCCCTAGCTTCTGC
TCTAACTCGTTGCGTGATGGTAACAGGCTCCAAACGAACAACATCAGCTACAGCCGTTGG
ACTGTCAAACTCTTCGTAGTTGATCTCCTCTACCTCGTCATCCGATTCCTGATCTGCGAG
GACCCAAAAACGCCCTCCAAACCGAGGGGAGTTAGAAAGAAGATCAAAACTCACCTTGCT
CTTATGAAGATCCCCTTGATGAGCCTCATGGAGGTCTCCGACGATGAGCTTGAACCCATC
TATCTCCATGGTAAGCCCGATCTTCGGAGTTTCCTCATCCTGCAAGTATCGACCTGCCAG
AATGTCGTTATCTTCATCCCGAATGGTAATCCAATGAGATACCTGATGAAGTTTGATACA
TCCTAATCGCTGCACTTGCTCCTCGGAGGAGGTGTCTACGAACGACACCGTCCAGTTCCG
ATGAGAATCCCCGCCGGACCCATCGTCTATGAGGGGCGCCCTGCCGCCCAGCGCTCCGAT
CTCCCCTCCGAGTGGCCCTCCGATAGCCGGAGGTAAGGCCACTCCGGTCGGCCCTCCGAT
GACCAGGGGTACCGCCCCTTCGGTCGCCTCCGGGACCGCCCCACCTTTCGCCTCGGACGT
CATCTCAACCCCGTTCCTATAGATCGCTCAGATTCCCCTACTGCCATTATATTCGATTGG
AATATTTTCTGCTCCACGCATCCTTAATGGAATGTAGTCGTTGGAACATAAATTCCATTT
TATTCTTTTTGTGTTCTACTTGTAACTTTAGCTATTTATAATCTAAAATTCGTTTGATGG
ATTAACTTCAATCTAACCAAACATGTCCGCAATTGTTGTCTAACAGATCACTTCTGGCTT
GCATATTAAAACAATGGATGAACTGCGCCCTCCATCTGTGGTCCAGAAGCTCCATGGACA
GTCCATGTTACTCAGACAAATTTCTTCTTTTGCCATGAGAAGTCCTGTAATCGACAATGC
ACATTTTGCGCGCAATTTCTCTGTGACAAAATACCATCAGACGAATGGAAGTATTGGGCG
TTTGCCTCTCAATACACCATCCCCGATGCGTGCCCCCGCGCCCGAAGAGAAGGGGTTTTC
TGGATTCATGATTGATTTTCTAATGGGTGGAGTTTCTGCTGCCGTCTCTAAAACGGCGGC
TGCTCCAATTGAGCGTGTTAAGCTCTTGATTCAGAACCAGGATGAAATGATCAAGAGTGG
CAGGCTCTCTCATCCTTACAAAAGTATAGGTGATTGCTTCTCCCGCACAATAAAAGATGA
GGGTGTGGTTGCACTTTGGAGGGGTAACACAGCCAATGTTATCCGTTACTTCCCGACTCA
GGTCCTGCATCCTATGCATCCTACCCTTATTTATTTATTTTGCATTTTATTTTTGTTGAA
AAAAGAAATGAACTGAATGATTTACACCTTTGCTTCAGGCCTTGAACTTTGCCTTCAAGG
ACCACTTTAAGCGAATGTTCAACTTTAGAAAGGACAAGGATGGGTACTGGAAGTGGTTCT
TTGGCAACATAGCTTCCGGAGGAGCCGCCGGTGCTTCTTCTCTGTTGTTTGTGTATTCTC
TCGATTACGCTCGAACTCGTCTCGCCAATGATGCCAAGGCTGCAAAGGTGGGTGGCCAGA
GGCAGTTCGACGGCATCGTGGATGTCTATCGCAAGACCCTTGCTAGCGACGGTGTCCGCG
GCTTGTACCGTGGGTTCAACGTCTCTTGTGTGGGCATCATCGTTTATCGAGGTCTTTACT
TCGGAATGTACGACTCCCTCAAGCCCGCGGTTCTCGTCGGTTCTCTTGAGGTCAGTAACT
ACACCATTGTTTCTGTAAATTCACTCTATACATTTTCCACTGATACTATATTTCTTCTCT
ATGCATATTCTGCAGGATAACTTGCTTGCCAGTTTCTTGCTTGGCTGGGGCGTAACGATG
GGTGCTGGGCTCGCCTCGTATCCTATCGATACCGTGCGCCGCCGTATGATGATGACATCT
GGTGAGTCCGTGAAGTATAAGAACTCCATGGATGCTTTCAAGAAGATCGTCGCCGAAGAG
GGTGCCAAGTCCCTCTTCAAGGGTGCTGGCGCCAACATCCTTCGTGCCGTTGCGGGTGCT
GGTGTCCTCGCCGTCTATGACAAGCTCCAGGTGGTCGTCTTTGGCAAGAAGTATGGATCC
GGTGGTGGCTAAATACGGATGGTGGTGGCTAAATTTTGCGTGGTGGTGTAGTGCTGCTTT
TGAATAAAATGTGCCATATGTATAGACTGTATTTACGCGCATATCTTGTAGGCCTAAATT
TTGTCTGATGGTAATGGGATCGCTGCACATGCCAAAGTTCCCATTGTTTGCCAGTTTCTT
TAGTCGGAAGCCGGGAGCTCGGCAGCGGCTTCTCGAGTATGGACGTAAATAAACTCGGCA
AATTAAAATGCAGGATTGCTGTTTTATGTCTAGATGTGAAATAGTTATCTCATATCTAAG
TCCAGAACCAGAGGATCAAACATATTATGAGATTCGCTGCAAAAAAATATTATATGAGCT
TAGTCCGGGTGCTTCAAGCTCGGCACCGACAGGCCTGGAAGTTAGTTTGGAGTGCAGAAG
CTTCCCCCAAGATGCGGCATTTTGGCTGGCAGGTTAGCTCAGGGTCTTTACCCACAAATG
CAGAGAAGCTCAGGCGACACATTGGGACTTCAGGCCATGCAGTCTATGTGATAGAGAGGA
GGAATCGTCATTTCATGCGTTGCTGGTATGCCCTAATGCTGCTCTCATGTGGGACACAAT
GCAGCTGTCATGGCCGTTGCCTAATAGGTCGGATATCACATGTACTGGCTCGGAATGATT
GCTGGATCTGCTTGCTGAATCGGACGAACATATCAGGAGCAGGATCATTATGGTACTATG
GCGGACATGGCATCTTCGGAATGAACTTATACATGGTAAAACCATCCCCCAGTGGATACA
TCTCGGTCATTTCTTACTAGCTATTATAACACATATCAACAAATCTCGTTAACCGTCGAG
GAGATTTTGAAAGGAAAGACTCCGGTGATGGATATGAGGCATGGTGCAGTATCCCAATCT
GTGGAGAGTAAACCCAGGCTGGTATGGCCATGTCCGGCAGAGCATGAGGTAGCACTGTCA
GTCGATGGCTCATTCGAATCTAAGGATGGATCGGCTGGATCGGGCATGATCTTGAGGGAC
AGTAAGGGGGCGGTCATCTTTGCTTCGTACCGTAAGCTTTTCCATTGTAATGATGCACTC
GAGTCAGAGCTGCAAGCAGTAAAAGAAGGTCTAAAGCTTGCGACGGAGCACTCGCAAGCT
ACAATCATCTTGTAGTCTGACTGTGCTGTGGCACTCATGATGATTGCGGATGTCTCCTCC
AACATATCAACATATGGCCATTTGGTGTCGGAAATCAGGGAGTATACGAGTACTAGGGCT
TTTATTCCTGTTAAAATTCTTCGTGAACAGAATAAGGTTGCATATTGTTTAGCGAACTTT
GGTAGATGTGGTGATAGCACAGTCTGTTGGTTGGACCGTCCACCTCCTTGTATCAGCAGT
TTAGTCGCTGAAGATTGTAACACTATCATTATGGAATAAAAGCCCGATGTTGATTCGCAA
AAAAAAATGTAACTCATTGCGGCGAACAGCCAAGCAGACGCACAGGCGGGTTACCCGACT
CGACCGGCCCATGTTCTTTGTCTTAAGAAAATCTGAAAAACAAATATTTTCTTTGTTTCA
TTTTTCCCTTTCTATTTATTTCCTTTTTTATCTTTTTTTTATTCTCAATGGCATAACGAA
AGAG