Contig Data
morexGenes
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Map Locations of contig_51931 (5137 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51931

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66669 1 567 bp MLOC_66669.1 Available Available None
MLOC_66670 2 2242 bp AK362746 Available Available None





CDS Structure of MLOC_66669






CDS Structure of MLOC_66670






Contig Sequence (5137 bp)

>contig_51931 5137 assembly3_WGSMorex_rbca.fasta
AGTGGTGGTAACTACCACCGATATATAGAGAGAGAGAGAGAGGGGAAAACAGAATGTCAA
AAGGATAAAAATAAAGCCTATGAAACCACACTTTTAAGGAAACGAAACCGTACATATGGG
CCAATAGTCTAGGTAAGCAGAGCGCCAACGTAAACCATATGTCACTTAGTAGTGTTTGCT
CGTCCCCCTCAGAAAAAAAAAGGAAAACAAAATTAGTGTTTCCTCCAAAAATAAAAATGT
GACTAGTAGTGGCATGACCCATTAACATGAAAACTGACACAAACCATAAACATCAAACAC
GATAGGGAGCAGCTAAGCTAAGTACTTCATCATAACGGAAGGCATGAGCACCTAGAAAGG
CCTTGACTCAAGATGTAGGCCACGGGATGCAACCTTTTTTAGGATTTTCTACCCCAGAAC
AAGAGTTTCTCAAAAAAAAAACAAGAACAATAAAATGCAACAAAAGAAATTAGCACAAAA
CAACTTAAAACCCCACAACAAGGAAAATAATGCATAAGGTAGAAAAAAAAGGCATACATC
AAGAACTTCACCAAAATCTTCTCCATCTATGCCTATTTCAAATTTTCAATTACTCCCTCC
GTCCATAAATAAGTGTATATATAAATTTGTGCTTAGTCAAACTTTCTAAATTTTGATCAA
TTTTATAGAAAATAGTAGCAACATATATGAAATGAAATTGATATATTTGGAAACTTCATG
TAAAGACAAATCTATTGATACTAATTTGATGTCATAAATGCTAGCACTTTTTTCAATAAA
GATAGTCAAATTTCAACTAGTTTGACTGACAGAAAAGAAAAAAAGTACACTTATTACCGG
ACGGAGGGAGTAGGTCATAAGCAAAAAATGGGCACCAAAATAGAGACAACCATGCATATA
GCCTCCTTGAGTGTATCAACATCTGCAAGCCCCAATGACAAAAGAAATGTGCATTCCAGA
ATATAAACACAAAGTTACATCGTGCATTTGTTTGAAAAAACAAAATTAAAAGTTCTCCCA
AGAAGAGCAAGGATGAAGGGTGCAGGACTTTTAGCTGTTTAGTGAGTGAGCGAATGATGC
ACAAGAATGTTGTGACCTTGACATGATTAAACTAAGTGAAACTAGCCAATGAATTGAAAA
AATGAGCAAGATATAGAAATATGGGAGACTAATTTAACCGAGATACTGTGGACCACAGAA
TTACACAAAAGACTGTCTTTTTTGATAAATCGGAATGAAGGAGTTATAACTTACAAAAGA
AGAAACGAAAGAATTACACTGAAACGTGAAGCAAAAATGACTGAGACAATAAGACATATT
GATCACAAAAATGACAGACCATGAAACAAAAATAATGGACTTGACAGGTCTTGCAGTTTA
GGAAGGTCATAGACAATGATAGGTGAAGGTCTGAAAACTACTATAACAGAGGTAAACTAT
CCAGAATAATACACTGAAAAGTGCACAAGGACTGAAGAACAAAAGACTAAATCCTCAAAA
TTGAAAATGAAGACTGAGGAATGAATACAAAAGAAGATACTCAAATGACTTGGCAAAATG
ATAATATTCACGACAATTTAACTATGTCATAACACATCGCAAAAAAGTACTCTATTATAG
CTAAACTGCTGCCTCAACAGTACTCCATTTTCATGATTCATGATTGCAATCAGCAATTCA
AGCGTTTAGTTTGATCACCAGCGGATAGGGAAGTCCCGAAATAGGTGAGTTTCACCCGAA
CTTTGGTCATTCCTTGTGCAGAAGAACTGGTCCTGGAACATGGAACTGGCCTGCTGATTT
TCGAAGTTGCAGCTCCCCCATCTATCAACAAGTAACCCTGATGCAAGTGATTCGACAATG
TCAATGGGCGCATCTGTACAACCAGATAAAAGAAAACAGGAAACAAATATTATTCCCTCT
CATCCAGATAAGTTGTACTAGAGCTGTGACAATTAATTTGGATCGGAGGGAGTATTAAAC
TGGATTATAGAATGTTAAATAGAAGTAAGATTCTGCTGACATGTTAAAAATCTGTACTGG
TAACTTCAAATGCAAACAAGTTTATAATAGCTTCGACATTTTGGCTCTCGCTATACAAGC
TTAAAGTAGGCTGAGACAAAATATCATGGAACTCACTAATTAGTATACACACATGTTCAG
CGATTGAGCCTAACAAAACCTACCTGCAAAATTCACTATCCCCATGCGAGCAGAACGACC
CGTATAATGAAAATTGACACTGAACAACCAGATTTGCAGACAAAACACCACCGCTTCTAA
CAAAAGAACACATGCCGCCACAGCGCCCTTTGACTGAATCGCTGAGCAATAACTCGTTTT
CCATCACTGAAAAAGGCTCTCTCATGTAAAAACGAAAACAAATCATACGCAGGAATCAAC
CATCTAAAAGAAGTCCCTAGAATCCTTGCGCGGGGAGGCGAGGCGTCAACCATCTAGGGC
AAGGAGTAGATCGAATGGATGGAATCTGAGGGGACGCCTCCTTGCAACTTGCAAGTCAAC
GGGGAAGTGCAGGGGTTGTGGCAATTGGCGCTCCGGCACAATGACGCCACCGGCTGCGCC
GTAGACAATGAAACACATACAGGGAAAGAGGGGCGTGGAGGGATAAAGGGACCGACGGCG
ACTGCTGCTTCCGCTAACTCTCTTAGGGCGCGCAGGACGGAGTATCCCTTATTGACTTCT
CCACCATGCCCCTTGACTCCATCTTCTGCCCCCTCCCTCTTCTCTCTCTCTCTCTCACTC
TCACTCTCACTCTCACTCTCCTGTTGACTATGACAGATAACAATGGCTTGCAGCAGACAA
CCCCCAAAACCGGGTTGTAACCCGCATGACCATGTTCCAGAAACCCACAATGGAACCCGG
TAACCTGACAAACACAGCCACAACGCACTGAGATTCACGTTCCAAATTCAACGGCCACAA
AATTTGTCTGGACGCGAAATAAAAGACAGTCAACTGAAAATTAGCAAAAATGTAATACTA
GAATACAACGACATAAGCAACTATCACAGATTTAGAACTGAACAAAAGAAAGAAAGAAGG
AAATGGTATCACAAGGCAACAGCTGTAAATAATTCAAAGGCCGATCTGCTGCACTAATTC
ATTCTGGAAGGCTAAAACAATGGCACCACATGTAACAATACCAACATGCTTTACGTGACA
CCATTATGATTGCTAAAAACCATGTCCTCAGACACAAAACTACAACAGAATCTAAAGGCG
CAGAATGAAACGTGTCAGTTGTAGTCTCTGCATAAACCAATAGATGGTAGAAAACCACTA
ATATGCAGTGAGAAGACAAAAATAAGTTTTGAGTACCTCAACAAAGTTCTGTGAGAAGAT
TAATCTGAGCTTAATTCTGGGCTTCAAACTCCTGCTTGCTCATGAATATTGCAACTGGCT
CACCAGGGGAAGGCGGATTCTTGTCCAGCACAGAAGCATGCTTTCCAGCTTTGGCACGAG
CAGCTTCATCAAATACCGGCAGGACCTCAACATGCTCAAGACCTAACTGCCTTCTGATCA
GCTCCAGGTTCTCTTCGAGCACATTTATTTCACCAAAAGGAAGCTTCAAATTTAGAGCCT
GGGGACCAACGTTCCTTGCTTCATCTTTCTTGAACCTGATGAAAGGCATGCAGAGCTTCT
GTACTTGTTTGAAGTTTGTTTCGCGGTCGATGAAGCAGTTCCTCAATGCTTCATTAATCT
CCTCATCGGGGGCAAAGGAGCGTGCTTGGCTATCAAAATTTGATTGAAGCACCCTTAAAC
ATTGCTCTTTCCATCCATCATAGTGCTCGTTGACGTATATCAGACCAACAGTGAGCTTGT
TTTCTGCTGAGGGAGGAGGTGCAGCTCCCTTCTTGGGTTTCTTGGAACCAGACTCTTGCT
TCTGAAGCAACTTCCTCATTAAAACAATGGAGTCCTGTAAATATATGTTCGCACTTCTTA
GTGTAGGATCTGGGGTGCCTGCAACTGGCCAGCCAGCTTTTATTGCAAAACCTTCCTTCT
TCAGCATCTTTTGCCACACATGCTCAGCGTAGTGGGGGCAGATCGGGGTGATAAGCCTGG
TCTGGACTTCCATAAACCGCTCCAACAACTCACGGTTCATGCCCACCGCTCCACAAGAGA
GTCTGTACTCATCTCTAGCCAATTGCAGGTCATAGAAACCAGACTTCAGGGCATCTCTGA
ACATGAAGGCGTTGTAGCTCTTCTCAGTTTCTTTTACAGCAATGTTGATCTCATTAGCAA
ACACATGGTCAGCATACGTAGAAGGAGGGCCGCCTCTCAGAGAAGATTCAGCAGCTATAA
CTTCTTCCATCCAAGCGATTTCCTTTGTGAGCCTCAAAATAGCAGCATTTGCAGTTTCAA
AAACAAAGTTTGCATCGTCCATACCATCACCAGCATCAGCAAGGGCAAACCTAGTGGCAT
CTGAAGAGAAATCTTCAATAGCCTCCCGAAGAGTTCGGAAGTTACCTGTGGACTTGGACA
TCTTCTCAGAGTTGAGCATAAGATGCCCATTGCAACGAAAACCACGAGGCCAATGATGCT
CTGGAAGAAGTGCTGTATGATTGTAGATGCTGAATGTCAGATGATTCTGGATAAGGTCCT
TGCCAGATACCCGAATATCAAATGGGTACCAATACTTGAACTCTTGCTTCATTTTGCTCA
AGAGGGCAGGAGAGATGTTGCTACTGGGTGCCGGACCATCACAGAACACATATTCCCATA
CTTCATCTGTCATTTCTTCTGGCTTGATAGAAGATATTTCTTGTCCATACATATTACCAT
TTTGTAGATGATGAGCGATGGTGTAATAAGCCATGTACAGGGTTGAATCTGAGAGAGATT
CTACCAGGAACTGCTCATCCCATGGAATGCGGGTACCTAGGCCAAAAGAGCGTGAACATG
CCCACTGGTTCAGCCAGCCCAAGGTGTGTTCGAATCCGTTACGGGTTTCAGCTGAGAATG
TATTCATATTTCCCAAACATTTGACTGCCTTCTGTTTCCATTCAGTTTCTCCATAAGTTA
TGTACCACTGATCTGTAAGAGCAACCACGCATTCATCGCCGGATCTTGACATTACTTTCT
TCTCAGGCTCACTATACAACACAGCAGAGCCTTCTCC