Contig Data
morexGenes
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Map Locations of contig_51923 (6723 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_51923

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66665 4 2149 bp MLOC_66665.2 Available Available LOC_Os07g39400.1, FRAME:+1, EVALUE:1e-119, 13107.m04081 protein polyol transporter 5, putative, expressed
MLOC_66666 1 410 bp MLOC_66666.1 Available Available None





CDS Structure of MLOC_66665






CDS Structure of MLOC_66666






Contig Sequence (6723 bp)

>contig_51923 6723 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCTCCACTCCTCTGACCCTCTCCCCGTCTTCAGCCGCGTCCCTGCTG
TCGGCAACCCGCCGACGTTCCCCTCATCGTCGTCGCCATGGTTAGTAGCCCGCATCCCGC
CTCCCCCCATCCCCCGTACCCCCCGCGATGGTTAGCGTTGCCTGTTCTGCTCGGCTCTGT
GGAGAGGAATCTGTCTGCGAGTGTCGACGTTTAGTCCGAGCGTTGCTGTGGCAGATCCGG
CGTTGCCCCGCGTGTTTTCTTGTCCGATTGGTTGAATCGATGGTTTATCTTTGGCTTTTT
CGTTGACAGGACCTGACTGACTGGTGTAGATACTATACTATTGTATCGTATCTGTAGATT
CTCTTGTGTGTGTATGTGGAAGAAAAGAACATTCGCTTCAGGAGGATCTAACTTTTTAAA
AAGGATGCACGCTTTTCGTAGGATGCACTTTCTAGCGACTTCTTTGCGGTATCTCTTGTC
TATGCTTTGCAGTCCTCGCATAGATCTCGTCAGTTTCAGATGAAGAAATCTTAGCACTGT
ATTTGTGGGAATTTTGCGTACATACAAGTTATATTTTTATAATTATAAAGAAGATGTGCA
AGGTTTGCTTGAAGATCTGTGCTGTTTGCAGTTTGTGCTATATATACGTTTGGCTGGCAT
CCTGCAGTTCAGATTGTTGGTTTGTGTGCATTGCTCGAGTGCTTGATGCGTTCTCCCCAT
AAATCTTTATAATATGTGTGGTAACATGTCTTTCATTGCACCCTACTAAAGTTTCAAGTT
TATACTTTAGTATGTACTACTAACTAGTGAGAAATGATAAATGGTGTCGGATTTTACGGA
CGAGTTTTTGCATTATCATTACTTGGCGGCGGGCGGGCGGTTCACCTCCTTGGTGGCTCC
TGATGTGAGCCCTTAGATCTCTTACAAACTGTCGAGATGATGATCTTTTCTACTGCCAAA
GTTGGAATATAATTACCCGCAAGTGCCACTAATAGTATATAATAGTAACTGACGAGGGTA
TCACATAGGCTAAGTTTAGCATCATGGTTTCGTTACATGTTGAGTAGTTTCTACTTTCTT
ATGGAGGAATCTATTAATTTGTTAATTGTATCAACGTATGGGTATTTAGGTATTTAGCAA
GCATTCGGAAAATGACGAACTGCAAGTGGGTGCACTCGCACTTTTTTTATTGAAAGGTGA
CATTTTTGTATTTAAGAATCTAAAGAAAACTAGAAGTTTGACTGCATTTCTGTGAGGTAG
CCATCTTATTTGGTCAATGGTATCAAGCAATTTTATTATGGACTCCTTTCCTCACTTGCT
TCTCTTGATTTCGATGCTTGCCACCACAGAGTCAGAATATTTTTTTGCTTCTTGAGGGAG
TATTAATTTCCCCATGCAACTGACGTGTATACTATGTCCGCTTGTAACCTTTCACAACTT
CTAGTATATCATATGTTTTTATTATAGTTGGTTTATTATTTATATTTAGGACTCTTATAT
TTTGAGTTAAGATCTAACAATTAGTGATTGCTCTCAGTTAGAGTTTACTAAACTGAGAGC
TAGATGTTTCTTTTCTATGTGATTCTGTCTTATTCATACATTTTCCTCATGAGCTTTGTA
TTTGCTTTTGTTAACTGTATAATAATAGATCAAGCAAAAGGCACAAATGTCATAGTTCAC
TGAGTAAACCTTAACCTTACAATTTTACTATATTTACGAGTCAATTCTAGAAGTCTGCCT
TGCTCGTCCATACCTGTTACGTTCTTCCTAACGGGCAAATCAAACTCTATTTCTTGGCAA
ATTGGATAAATCATCAGTTAGCTCGTGATGGTATCATAGAGCTTACCTTGATTAGTCTTT
GCTGTATGGCTAAAAGTTGGAATTTGTACTGTATAGCATTACTGGCATCGAGTACGGAAT
TAGTGTGTTGTTACTTGAAACTATTTAACACCATTATGAATGTTATTTCCTTGACTCTGT
ATCCAAAATAAACAATGCTTATATGTTACCCCTTCACTGATTTTTTGTGCAGACTACCTC
AAGACGTGTTGCTGATAGGAAAATTGCACTATTTGAGAAGAATATCATGAAGAGGGGTTC
TGTTCCGGAGACAGTCAAGAAAGGAAATGATTATCCTGTTGCACCTATCGTGCTTGGATT
TTTTGTCTTCGTTGTGGTTGGGTCATGTAAGTTTCTGCATTTATGGTGTTATATGTTTGA
GTTGTTGATTGTACACTCCACTTGTTTGGTATGTCAGCTTACCAACAAAAACATGTCTCA
ACATTTTTCTTCAAATAACTGGACCAACTAAAAGACAATCCCGATAAGTTTCTATTGGTA
GGAAAATAGCATGCTCGCATTTTAGTAAGTGCAGAGAGCTTTGTATGTTTTATGGAAATT
AGATTGTGCTAAACTGCTATCTTTGTAGAGAACGAACTGGTATCTTGTGCTAAACTGCAG
TATTTTTTTAGAGAACCAAACTGGTAATCTTAAAGCAGTGTGTTAGTAGTGAGATATTTG
GTATTTACAATATACACCATTGTTTTTTCTTTTCTTTTAAAATGTTATTCAATTCTTGGT
GTAGTACTTCTGACCCTTCTAAATTTATTAGTGTATCCTGTTCGAAAAGGTTAGAAACTG
TAACCCTGGTCTGATTTGATTCACATATGGTTTGTTGACAACTAATATTACTATCCGTGG
GCATCAGCTACTCTAATCTGATGCAAAGGAATAGTTTATTTTTCTATAAATATTATAGAA
CTTGTGACTCACATTAAAGAGTTCTGCAAATGAAAAACCGCTGCATCGACAGATACTTCA
AATTCCTTCTCATGTCTTGTCCACTCTTTTCTCCATGCAGCTCTGTTCCAGATCATCAGG
ACAGCCTCAAGCGCTGGCCTCTTCTGAGTATAATGGCGCTCTACTTATAGTGACAATGAA
CAGGGTTGTCATATGCAGTTGGTTGTCAGTTTAAAATAGAACTGAATGAGATAGCTGGTA
CTCTTGTGATGCCTGTTATACCTCTTGCCGTTGTACTTGGTGGAGTTTAAGTTATATGGA
GGTCATACCATTGGACTGCTAATCTGTATCAATCGGGGCCTCACGCCATTGGAAAATTTC
CATTTAATATCTGGTTATAATTTGCTTTACATACTTGAATAATGTATTCAGCGAAAATCC
ATTTTTGAGCCCAGGCTCATATGCACATGCCCTGATTAAAAAAATAAACATAAATACAAA
TAAGTCCAATTGTCTTTTGCATAGTAGATAATTTCATGTGTGATGTCCGTTTCAATTGGA
CATCCTCTCGCAAAAAAGACAAATTAAGGACCTCTAAAAAGTTTACTGTTTGTTCACTGT
TTTTATTTAATTTATTTTTTTGCTGAGAGCTCCTTAGATGTTTAAATGATGTGAAAATTG
AAGCGGATCTCACGCAAGAACTTATCTACCATGAGAGTTTTTTTTTTGGAATTTTTGGCA
CCGAAACGCTGCATTTCTGAGCCCGGCTCATCTGCGTCCGCCCTGATTAACTGTATTCCG
TTGGTTTACTCTTAGCCGACTTGGCTGCAATCTTCTGACTCGGAATTTACAATGGGCCCT
GTCCTTTGGCACTCATCCCCATCTCGCCCAAAATCATGCAAGTGCAGGATACAGATTAAT
ATCGAGATTAAGCACGGTGCACAGTCAGCTTCAGAAGATCAATCCCCAAAGCAGCGACCT
AGGTTATTTTAGGGGATGCATCTTCTTAAATCTTCCTTGCTTAAGGAGGAGTACATGGTA
ATAGTACGATTATCTTACAGAATACATATAATATTGTCCTGACCCGGTCAGTCTACAGTT
GCTCCCTGGTAATTAGGGTAGTTATTAGTTGTTACTCGTACTACCAGTCAACCACTTGGG
AGAGTGTGAGAGGGTTTCTTGGGCGTTTGATACCTGGTTTCCGGAGGAGTTGGTTAAAGG
AAGTTTCGTTCGTTGCATGGTCTACCGCAACTGCATCACTCGTGGAGATGAGATTGGTCG
GATCTGAACTCCACCTTCCCAGATCCTTGCCGTAGAGCTCATGTCTTTGGCGCAAGGACG
CCAGGAATCCATCGTGTGTGATGCCTAAAGGCGGATTCGTGTGGAGGGGTTCATTCTGCG
GGAATGAAGAGGATTGGAGTCTAGGGATTCTCGTCTCACCGCTGAAATGCTCATCCAACT
ACATATCTTGTTGAACTGCATCTTGCTCAGGTTCGTGGACAAATGCCAACCAGCAGGTCC
GGCATTCGCCTCTATTTCTTTGCATCCAGTTCGTTGTGGAGAGGTGAAAGTTTTGAAATG
AAATAGTAGTAGGTGTAGGTGGCATGCACGGCGCAGCACGCTGGGATGAGTTGATCAATT
AACAATTTCCACGCTGCTCACACTTCTTGACCTCATCTTAGTACGTGATCACCACCAATG
TGCAGAGTACCTGACGGAAAGATCGCCGGAGCCGGCCTGATTCCTCGGAGATGGCGAAGC
CGGGAAGGCGCCCTGTAAACAAGTATGCACTTGCCGCCACCGTGCTCTCGGCGGCGACGC
CCCTCTTCTTGGGCTACGGTGAGAATGAACTCCCACGCATGCAAGTGTCTCCGTGTTGTG
ATCCATTGCCACACTGTTCAATTTGCAAGTGCGTGTTGACGCAGACCTGGCCATGGTGAG
CAGCACGGCCGTGCTCGCGGAGGCCGACCTGAGGCTCCTGGCGTGCATAGTGGTGCTCTC
CACCCTCGTGGGCGCGTTCACCGCCGTGGTAGCGCAGTGCCTCATCGGGGACCGCCGCAC
CGTCCTCCTCTCTGCCGCGGTGCTCTGCGTTGGCGCGCTCGCCAGGGGGCTCGCCGCCGG
CCCCGCGGCGTTCGCGGCCGGTGTCTTCGTCAACGGCGTCGGCATGGGCCAGGCGCTCAT
GATCGTCCCGGCGTACGTCGCCGAGCTCAGCCCCTCCTCGGTGCGCGGCGCCCTCCCCTC
CCCCCCGGACGGCTTCGTGTACCTCGGCTGCATCCTCGGCTCCCTCTGCTACTCCACGGG
CTTCTTGAAGCTCCCGGCGCACCTCGCCTGGTGGCTGACCATAGTCTCCGGAACGGCCGT
TCCGGCCTCGCTCAGCTTCGCCGTCCTTCTCATGCCGGAGTCGCCCCGGTGGCTCGTGGC
CAGGGACCAGGTGACCAAGGCCCGGCGTGTGCTCTCCAGAACGTCTGCGACGCTGGAGGA
GGCGGAGCTCCGTTGGCTTGAGATAAAAGCCGAGCTCGGCACGCCGCACGATGGCACCGA
AGAGAAGGTGGCGACGTCGGTGACACGTAACCGGTGGAAGAAGGAGTGCGCGATATGGCG
GGAGCTGCTGGCGAGGCCGACGGAGCCTCTCCCCCGCGCGGTCGTCAGCGCGCTGGTCGC
CAAGGTCTTCGCATCCGGCATGGGGCGCATGTCCCAGTACGTGCAGCGCGCGTTCCTCGA
CGTCGGCGTCTCGTCGGCCCGGCAGATGCCGAGGGCGCTGCTGGCGTTCGGGATCGTCGT
GGTGATGTCCTTCTCCGTGTCGCTGGTCCTCGTGGAGCTCGGCTTGCTGCTGGTGACGGC
ACTCGCCGCAGGAAGCCGCGCGCCGTCCCACCCCATGCCGCACCGGGGCGGCCACGTCGG
CATGACCCGGCGGCAGGAGCAGCTGAAGCGGTCGAGGGGGATGTCCGCGACCATGCTGCT
GTCGCTGATAGCGCTGGTGTGGATCGCGCCCGGGCCGGCGCAGTGGGCGGACGCTGCGTC
GTCGTCCGGCAGCAGCCGGTGGCTGTGGGCGGCGGCAGCCGTGGCGAACACGGCGTCGGT
CTTGTGGAGCTTCGCGAGGGCGTACGGTGCCACCTCCGTTCCCGTGCACGGGGGCTTGCT
CGTTTGCCCCGCGGTCGGCGTGCTCGTGTGGATGTTCTTTTGTGCGTGCCTTCTTGGCGC
GAGGAGGAGGCGAGCCAGCTTCATTCACGTACGGTCTTTCCCAATAACCACGTCCGCCGC
TAGTCTAGCCAGCTTGATCCACGGCTGAACGGGCGACGGCACCGCAGGCAAGGATGGGTT
CCCTCCGGTCATTGGCCAGGCGATGCTAGCGACGCCATTCTTGCATTTCTCCTGTGCGTG
CGCGCTAACGAGGACTGGCGATAGCACGCAGTCGGTGCCTCGTGGATGTTCGTGCGGGAA
TGGAAAATGTTACAGTAGAAATTTGGGAGCAGAGTTCCGATCGGTCGTTATCGCTCAGAA
CGACAATGTCATTGTTGCTCGGCATTAAGAAGGGGAAATTCACGATCTCTAAGAGCGCTT
CGACCAGCGCCCAAAAAAGGAATTTACAGCGTGCGTCTAGTTTTTTTAACGCGCCGACAA
GCGCCGGCTCTAGCAGTCGCAACATATTTTAGCATGTGCGCGGCGCTTCGACAGACGCTG
CAAATTAAAACATAAAATTAGTCCAACACTTATAGATAATATAGATAATATAGATAATAA
AATTAGTCCAACACGATAATAAACTATATAGATAGATAAAACTATTTAGAGACGTCACTG
TGGGTGCTGTCCGAGGTAGATAGCCATGCGTCCTCCCAACATTCATCGTCAGAAGTGAAG
ATGGACGTTCCACCATTGTCGACAACCACGCACTGCAATATAGCGAGTAACTTGCGTCGA
CGCCGGTCGTGTCGTTCCTCGCGACGCCTTGCCGTCCTCTCCGCCTAGAAGGCGTTCTCG
GCG