Contig Data
morexGenes
Links



Map Locations of contig_51854 (3652 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51854

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66620 2 995 bp AK374572 Available Available None
MLOC_66618 1 499 bp AK248744.1 Available Available None
MLOC_66619 1 425 bp MLOC_66619.1 Available Available None





CDS Structure of MLOC_66620






CDS Structure of MLOC_66618






CDS Structure of MLOC_66619






Contig Sequence (3652 bp)

>contig_51854 3652 assembly3_WGSMorex_rbca.fasta
CCCCCGCCCTTCCCCTCCCCCCTCCCCCCCTTCATTCTTCTGACGAATCCTGATGAGGCC
TGTTCGACGTGTGGGTGGGTCATGGCTGGGAGGCAAACTCTCTGATTCAGTCTGTAGAAC
GGATTCCAAGGAGCAAATCTTGTTTGGGTGCAAGAAACCATGGATCCAGACTTACATGGC
ATTAGATGCTCACTTTTTTTTTAGTTTCTGTTTTACTACATGCTGCCAGTCCAGATGGTC
TGAGAATTAGCTGCCTGATCAAGGATTCATTGCAAGGGGAGTTTGATGGAATTGGGGCAT
TATCTCCATGTTTGCACTGAACATATGTGTTCGCCATTGCCGGTACCAAGTGCATGCTTT
TCAGCAAGATTTTGGCTGCCATATGCTAACCTATTGCCCGGTCCATATGTTCTACTCCCT
CCGTTCCTAAANNNNNNTCTTTTAAGAGATTTCACTAAATGTCTACATACGGAGCAAAAT
AAATGAATCCACACTTTTAAATATGTCTATATACATCCGTATGTAGTCTACTAATGAAAC
CTCTAGAAAGACTTATATTTAGGAATGGAGGGAGTAACATTTGTTGATTTTGATTTTCCC
CATGGTGGTTGTTTGTTACTGGTGAAATTTTAAGCTAGGTCCATACTATTTCATCTGCGT
GTGTCCATGATCATGTTATCTTAATGTTTCATCGGAGGCATGGCTAAGCGGTTTATTGGT
ATTCTTTTTGCTGTGTCATCTTTGCAGGAGGCAGTTCGAGCATGCTAACCTAGAGGCAAT
GGATGAATCCGCTGAATGGAGAATGAAATACGACACGGAATTGGCAAGAAACAGGGAGCT
GCAAGATGAACTTTTAAAGGTCGGCTCCATTTTCAGTAGATGTACCTGTACACTCTTATA
TTCTCCCATGATTCACGTCTGCGGTGCTTATGGGACAACCTTTGTTTGTAGGTTAAGACC
TCGCTGTCTGCTTCAACCAAGAGATTTGAAGAGTTGCAGAAGGTAATTTTGGGGCAAATT
TCAGTGCATTTTCTCACTGTATCAGAATCTTAGTTCTGTGTATCCTGTTTCACTTGACCG
TGTGCTTCCTCTCCATTTATTTTCACTCTCTCCTATGTACATGCCTTGCTTAAGCTCATC
TGCATCGCTGCAGGATAATGAGATGTTGAAGAGGCAGACTGAATCCATGAAACTGCAGTG
CAATTGCACCGTTCCACTGAATATTACTCAGGAATAAGGACATTTCACTGGCAGATTAGC
ACTAATTTCCTTTTCATTTCTGTTATTATTGGAGTGGGGACAGATAGAATGATCAGCTTT
GTAATAGTAGATATGGTGACTGCAGCAAAGAAAACTTGTGTTTGCAATTGTTAATGACCT
ACACACTCGGGCACAATTTTTGAAGTAATCACTTGTGACTTGTGAGTAGCAATGCATAAG
TGTGTTTTCGGCTCATTTTCAATGTTATATATTAAAGTTTTGTGCTGGATTTGGGGAAAT
TGCTTGGCACCTGTACATATTCAGTGTAGTGATGGTTATATATATACTCCCTCCGTTTCT
AANNNNAAGACCTTTTAGAGATTGTACTATGAACTACATACGGATGTANNNNNNNNNNNN
NNNNNNTATAGATTCACTCATTTTCCTCCGTATGTAGTCTTTTAGTGAAATNNNNNNNNN
NNNNNNNATTTTGAAACGGAGGGAGTATATTGTTGTATATTTTCAAAAGTAAAAAAATCT
TGGCTGTAGACATTATTTTTCTTCTTGAACCTGCCAATTCACCTGATTACCCAGGGTGGA
CCTAAAAGGCGGCATATTAATTATTAAACCTTGCTCTTCTTGTCTCTGACCAGTTATCAC
TTGCTGTGAACTTCTGTTCAGGTGTTCTGCTTACATAAATCTATTCAGATTATAAATATA
CATTGCAACAGTTGCCCAATCCAAAATATACAGTTGTCATAAACCTATTCAGTTTTGTTT
ATGCAACAGTTGCCCAATCCAAAATACTCCATCAACCTATTCAGCTGCCTGGATTAATCC
TGCTGAGCAAAGTAATGCATCATGGTTGTCACTGTTCGATGCTAATCCTGCTCAGTAGGA
TCTGAACTAGGAACATCGTCATCAAGGACACTATGCCAGGCGCCTCAACCAAGCAACTTT
TCTCAAACCCAAATCTAATGACTTTGAAGTTCCAACACTTATTATTACTAATGGTTCTCA
ATATATATATATCCACTTTCATCAGCATTTCAAGAACCAATTTACACGATAGATAGCACA
TCAATGCATAGTTACACACTGCTCAAAGCTGAAGGATACCATACCCAGTCATGGAATCAG
TAGTATCTTGCCAATGTGGGAGCTTGACTCCATCAGCTTGTGAGCTTCGGCTGCCTCAGA
TAGAGAGAGCGTCTTGTAAACCACCGGCCTCACCTTGCCCGACGCAACGGCTGGCCATAC
ATTTTTCTCCACCGCGCTGACGATCTGAGCTTTATTGGCCAGGCTTCTGCTCCGCAGCCC
AGCAACTGCACATAATCATAGCAATGCAATCCATTGCTAAAATTAGCAATGACAATATAG
GAATCGCCCAATCACATAAAAAAACAAGAAATTATTAACATGGCATAATGAGAAGCGGGG
AAATCGTGTGGATCAATGCACCTTGTATGGTCAATCTTCGGGCAAGCATCGCCTGCAGGT
TCAGTTCAGTTACAGTGCCTCCCATGAAACCAATGATGAAAAGCCTACCATCAACTGCTA
AGCTCTCCAGATTGCGCTGGAGATAAGGTCCGCCGACGTTGTCCAGAATAACATCAACAC
CTGGTAGAGATATCCTCCATACTACGGTTAGATATTTTGTTTTATGTTTGCATCAGGGCA
TCAAGCATAACAAGAGGATGACAGGATAATACCATTTCCATTAGTTTCTTCTTTGATGCG
TGCTACAAAGTCTTCGGTTTTGTAGTTTATGCATACATCCGCACCCAAACCTGCGCAAGC
GGCTAGTTTCTCTTCGCTTCCTGGAGCGGCACAACAGAGTTACTTGCGCGCTTTTGGAAA
ACATTTTAGTACCATATGTAGTGTATCTATCTATCTGAAACAACAAACCTGCAGTAACAA
TAACCTTGATTCCGAGGTGCTTTGCCATCTGTATGGCAAATGTGCCGATTCCGCTTGATC
CACCGTGGATCTGCATTAGAGATGCTTCATCAGCAGTAAAAATACAGACATGAAGATTCA
CTTCCAGTCCAATTCAAGTAATTACTCGAGTAAATAATTTCATATTGCATTGGAGTAGCA
TCATTCAGTACTTTGCTGTTTTTCAGTTGGTCAGCATGCCAATTTGGTCATTCATAATTA
TTTGTTGTGAGTAAATAATTTGATATCTTTACCTAATAATAAAGAGGCTATCGCTTCTGT
TGGAAAACCCACCGTGGCTATTTTGCAAAAAGGTCCCTGCATTTTCCCATATTCAACCCG
CTGGCCTCGGTAAGTGAATAAAAAACTGTTTGTTTTTTTGTCAACCCTTTGTATACGTTT
GACCGCAGATCAAGCATATCCAGCGGCGATCCGATCGGGACACGACGGAGGACGACGACG
GCAAGGCTCCGAGAGGCGAGGGACGACAGGGAAGCCGCGGACGTCGGCGGCG