Map Locations of contig_51821 (8342 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51821

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66597 3 2272 bp MLOC_66597.1 Available Available LOC_Os10g36848.1, FRAME:-3, EVALUE:0.0, 13110.m03345 protein cytochrome P450, putative, expressed
MLOC_66598 1 122 bp None Available Available None





CDS Structure of MLOC_66597






CDS Structure of MLOC_66598






Contig Sequence (8342 bp)

>contig_51821 8342 assembly3_WGSMorex_rbca.fasta
ATACGAAGTTATTACGAACCTGAAAAGCCAAAAACATGCAGAAAACAACGACTGGCACTG
GACATTGGGTTAATAGTTTATTGCTCAAAAATAATATTAATTGGTATATAAACATCCTAA
AAGCATCATAGAATGATAATGTTATAACGTGGAACGATCAGAAATTATGATAATGTTATA
GCGTGGAATGTTATAGCGTGGAACGAATGCGTCTTGATGGACGAGCATTGAGCGATGTCG
CTATTTGGCGTCGTGGTGGCATAGGTGACAGGTAGGCCTGTCAAGATCAATGTGTTGATC
CCTCCTGAAGATGGGTCAACAAAAGATATCGTTGATAGATTCTATATTATGCGCATGCAC
TGCATAGTGAGGTTTGCTAGACCGGTTGATGCTATCGGTTCGCTGTGTGGCATTGAGTGA
GGCCATCGGATTAGATGATGTTTATTGGTGCAAAATCAGGACACACCATCAAGCATGTAG
GTATAGCAAGAGGGATCGCAATATGACTTTGCGTTGATCAATGTATTTGTTGTATCTGGC
TGTGATGAATAATATAATAAAGATGATTGTGTGCATCCTTGGATGGAGGTGTCGGGGTTT
CAAAATCCATTTCAGAAAAAAAAAACTAGGCTAACAACTATGACTTAAGGCTTACATGCA
TGATTTTTTTATGTTACATGTCCCATTCCGGCTCCGCCGATGTATTGAAGGGGTCTATAA
AACATCAAAAGGTGGTGATGCCACAAGATTTCTAGAGCAGTACACCTAGTGCGGTTATTT
TATACTACCTTTATCGAGGTTTGTAAGGCGGACACAATTTTCTTAATTTGACTAACAAAA
TGTGTGTACTATGCTCTTCATTTGACCACGAATTAAGTGATATGTTTTAGTGATACATAA
GATACATTTTGCTAGTTAAATTGATCTGATCGTTGTAATTCCAATCTGATAGTTGTGCAT
ATGTAACCATGAAAAGCAAGTGCCCAAATAATGAGAAAGGAAAAGCTAATACTTTACAAA
TAGGAAGGATGATATAGACTTGAATGTTCCTACTTGTGTATTTGTTTTCCACATTTTTTT
TGCGACATGAAAGTTGATTTGAATGTTTGAAAATTTCAGGCTCCATGAAGCCCAAAGCAA
AAAGTCCACTCTCAAATGCCTAATGGAGCTTGAGCTCCATAGAGCCCTTTATTTTAAAAG
TTTGATATTGAAATATTTTGTTGAAAAGTAATTTTGACAACTACTTTCCTATGCTATATA
ACTCCCATATGAAGAAACTCGTAACTAAACTGATTTTTTATGACACGGAAAAATAATTTT
ATATGATGCTCCATTCTATTTAGGTATTTCCTATTCGTTTCAATCTTGTATTTTTTCTGT
CTCAGTAACATTACTTCATTTTTTTTACGAGTTCCCTCAAAAAAATAATATTATTTGATG
AGTTCTTACAAGTACAAGTATGAATTATTTCACTTTTTTGGGAGAATCACAGAAGGGAGA
GACCATATATTGGGTTGTCAATTAGTTGCGCCTATTCCTTGCAGTCATTTATTCACTTAT
TCTACCAAACTTTCTTACTACAGTACCAAAATATTCTTGTATTTCTTGGAGTACCATCAG
TTCATCCACAAATACTGAAAATGTTATTTTACCAGACCAACTAGATACTCTAATGTTGTG
TAACAGAATAACTAGATGTTCCTTATATGAACTCTAATGTTGTGTTTGGTGACCAAATCA
TGTGCACGCAAGTCACATTTAGTTAATACCTCGACTATCGCACTTAATCATCATCCAGTA
CGAATTGTGGAAGGATGACTTTGCACTATAAAATTAACACTACCTATTTGCATTGCTGTC
AAAGAACAACTAGTTATATGCAAGTATATGCATTGTTAAACATACATAGTTGAGTAGTTG
TGTGCTACTTTTTATATATTATTTTTGTGCAAATGCACAACTATTGTTCAAAATATGAAA
AGTGTCATGTAAAATCCGAAATGTCCATATCAAACTAATATATCACGCTTGTAAGATAAG
AGAAAAGAGAGGTGGAAATTTTTGCCTTAAAAGAAAATTGTCATACAAAGAAAATTTACA
GAATTTGGACCCAACAAGTCTCAAATAATACGGTTTATACAGTTTATGTTCTTAGTCATA
GAACATCCATCATATGCTTAATTGTAACCTAAGTATGCACGCAGGTAGCATGGACATCCC
CTTATTATGTTCTACAGTATCAGAAACAAAAAAGAAAACAACAACAAAATGCAAGAGAAA
ACCACCAAACTCTTGCAATGGTACCTCCACCACCTCCCATCAAACACCCCCCCCCCTTGC
ACAGCTGGTAGATACTGTTGACGGCACACGCAAAGGCAACGGGCGCACACACTCGCACGT
ACGATATCACGCCTGATGCGCGCTGTCGACATCAATGTCAACGACCAAGGGGCAGGTGAG
CCGGGGTGTGGGCACGGCATAGAGCCTCGTGGCACGCGGCGCGGTGAGGCCGAAGATGTC
ACTCATGTCGAGCTCTGACGGCTTCATGCCATCAGGTAGCGCCCAGCTGAACCCGTGGGT
GAGCTGAGCGACGGCGAGCTCCAGCGCATACAGGCCAAGCGCCATCCCAGGGCACGAGCG
TCGCCCGGATCCAAATGGCAGGAACTCGAAGCAGCCGCCCTTGAAGTCGACGCCGGCAGC
CTCCCCTTCCCCTGCGATGAACCGCGACGGTCGGAATGTGTCCGGATCCTTCCATGCCTT
GGCGTCGCGGCCGATGGCGAAAACGTTGATCATGACGCGAGAGGCTCGGGGCACGGAGTA
GCCCCCGACAACACAGTCTTCGGCGGTCTCATGGAGGAGCAGTGGGATGGGCGGGTGCAG
CCGGAGCGTCTCCTTGATGACACACTTGAGGAAGGGGAGCTTGTCGAGGTCCGACTCGTT
CACATTCCGGTCGAGACCCACCGTGTCGACGAGCTCCTTCTGTAATCGACGGAGGTCGTC
CGGGCTGTGCATCATCTCCGCCATCGCCCACTCAATTGCCGACGCCACCGTCTCGGTCCC
GCCAAACATCACGTCCTGCCGCCCATACACGCACACATCCACATCAACAGGTTAGCTTAT
AACCCGTTCAAAAAAAACCAGGTTAGTTTATAAACTAAGAACACCAACAGGTGTCGTACC
TGCGTACATTATATAAAACATAGTACAGTACTGTGTTCAATTTTGCGCGCCTAGTGCTGT
GCCGTTCTGAAGTTACGAGGTCGTGGTCGTTTTTCCTTTTCGACGTGCACTCAATCGCAG
AAGGGCCGAGACTTAACATGATTCCTACCGTGAAAGTAAAGAAAACGATGTGGTTGGTGC
AATGGCAGGGAAGCCGTTTGCGTTCAGATGTTTAAGTCGAGAGCTTTTCCCTTGGGAAGG
TGACACGCACCACAACATCAAGTCGGCCGGCCAAAGCTTATCTGCGTGAGACATAAGGTG
AAAAAAATGACGCACCATAAAAAGTCGGATGCAGAGCCCCAATCTTGGAAGTTTTCGGCT
GGTTTTTCTCCGGTGGAAGTTGAAAACGATGCAGGATACGGTGTGTGTATGTGTGTGGGC
GTGAATGAACCAAACGAGAACTGAAAAGTACAAGCAGATTACTAGCAGCCATGGCTGCGT
GGGCGCGGCTTCTGCACCTCTCTACATGCACCGATCCTGACCCGGATGATCATTCATGGG
CGATGAAACAAAAATAAGCCCCCAGGCCCCGACAACGCCTCACATATACTCGTATATGTG
GCAGCTCTCGGTGCATAATAATTAAGGTCATATACTAAAGATTGACGGGTTCGCATTCCG
GTACGTAAAGAGACAAACATAACTAGGGTCCAGCGTACCTATTGTATGTGCATACTACGT
CATCTGTGGTTCATGCGTCAAAGCAGCTTGCCCCGTAGTGTATACGGCGCCACCTCCTCG
TTTGGTTGGGTCGGGCTTTCCGACGGGAAGAAAAATGTGCACGTCACGTGTCTCTAGCGA
GGCGTCTGCCCGGCTACGGCTCAGGGCGCAAAATGTTGGGGGAAAGCTCAAGGGAGCAAG
CTTGATGATATGTTTTGACCTCGCGTCAACACACATCTAAAAGTTTGAAATGTATTTGGA
TTAATTTTATTTTCCACGAATATATTAGTACTTGCTGGAATTTCATTGGAATTTCATCCA
ACATGGTAGTACCAAGTATACGCAACAAGCGGATGTTTATTACAGCACGTGCTGGACATT
GACGTGTACATTAATCGCCATATATATGGAGGTATCTGCACGATCTTTTTTTGGTATGAT
ATTAATTTAATTTTATTCTTTTGCATGATAGTAGTACTGGACGATCAAAACTGACCTCAA
GAACAGCTCGGTCGCCGTATATCTTACTGGAGTAGGAGGATCTTATTTAATCGTCAGAGA
TATCGCTTGCACTCGCCAGGCATTAATCAACCGCGCGTAGTGATAAGCAAACCATTTAAT
TGCTACGATAAATAAGGATTTCGAGGTAAGAAATTTGCTTGCCTTTTTTGTCCGTTTATC
TGGTGTCGAGGTGTGTTTCGGTAGACCCCTTCTCACAAAACGTAAAAAAAAAAACATATA
TCTACATTGTATTGTATACTACAGACCGTTATATGTATACAATACGAGATGAATATACGT
ATGACGACTTGTAATGTATAATAATATACAATACGAGTTAGGTGTACGTTTTCATTTTAC
GTTTTGTGGATGGGGTCTAGGAAAGCAAAATTGAATACATATTACGTTGGTGATTTGTTT
TTGTGCGCATATTATGGTAGTAATTGATTAGGGGAATAAAGAGGGAAGTTTTGGTTCACG
TACCATGATGATGGCCTTGATGTTGTCACGCGTGAGGCGAAGCGTGTTCTGCAGCTCATC
CCCGCCGTCGCCGGCGGCCTTCTTGGGCTTCGCCTCAGGGAGGAACGCCAGCATGTCGTC
CACCATGTCCGCGTCGACGTCGTCCGGGTTCTTGCCCCTCGCCATGTGCTCGTCGATGAT
CTTGTCGATGAACTCGTCGAGGGCGGCGCGTGCGGCGCGGAGGCGCACGTTGATGCCCTG
CGGGTCCGCCCAGCTGAGCCACGGGAAGAAGTCGCCGATGTTGAACGCGCCGAAGAGCTT
GGAGAACTCCTGGAGGATAGCGATGAACTCGTCCTGCTTGCCGCCGTCGCCGTCCGCGGC
GGCGCCGGCACCGAAGGCGGCGCGGAAGATGACGTTCTTGGTAAGGTTGAATATGAGCTC
GCCGAGGTTCACGGACTCGCCGCTCCGCCGAGCCACGGCGCGGACGAGCGCCGCGGATTC
GTCGCGCACGGCGATCCACGTCTCCGGACGGCGCCGGCTGAAGAGCTTCATCCGCAGAGC
TTGCGCATCTGGCGCCAGAAGGGCCCGTAGTGCGCGAACGCCATGTCGGCACGGTCGTAG
GTGAGGTAGGCGATGGCGATGGTCGCCGGCCGGTTGGAGAAGGCGCCGTCCTGCGCCTGC
AGCACCTCCCGGGCGTACTCCGGCGTCGACACGGCGAAGGCATGGAGCTTGCCAAGGCGG
AGGTAGAGAAGGCCGCCGTACTGCTTCGCCAGCGCCGCGAGGCCCCGGTGGGTAAGCTGG
TCCATCATCGACATGTTGCCGACGATGGGCAGCGGGTTCGGCCCCGGAGGAAACGGCGGC
GCCTTGCCCCGCCGGCACCGCTGGAACACCACGAAGGCCACCGAGGCAACGAACAGCCAG
CTCAGCGGATCTTGGAGCCATTCCATGGCGCTCTTGCCCAAACCCACCATTGATGGATAC
TCGAACTAGAAGCTGTAATTTGTTTTTGGCTTTTCTCGGGGTTTAAGGTTGATGTCTTAT
AGCGCTCTTGAGGTAGAGCTGAGGAGAAAAGTGGAGGGTGCCGGGTTTATATAGGTGGAA
GGAGGAGTAGGTGGGATCAGAGCGATTGTCAGATTAGGTTGCGACATGTATGGTAGTAAT
ACTAGCATCCAGCATCATATATTTTTTCCGCGTTTCTTTCCGATGATATTTATTTGGGGA
CCATGGCAAAGGGGTGGATAGTAGAAAGAAGATGGTTTAGAAAATTTTGTTTCTAAATCA
AGCAGATGGAGTTTCCTAAAGCATGATTGTTTGCTTGCCGGTGGAATACCAAATTAAATA
AGTTTTTTTTTGCGCGGACCAAATTAAATAAGTTAATACTCCCTCCGTCTCAAAATAAGT
GTCTTAACTTTGTACTAACTCTAGTATAAATTTGGACTAAGCTTGAGACAGTTCTTTTGG
GACGGAGGGAGTAAAATATAGTACATGAACGCGGTGTAAACCATATATTAGAGCATTCCC
AAATAATCTACTCCCTCCTTCCGAAATTACTTGTCGCATAAATGTATAAAAAAAATGTAT
TTAGAACTAAAATACATCTAGATACATTCATTTCTATGACAAATATTTTCTGATGAAGAG
AGTACTTATGTTTGTATTACGTATGGAGACATGGGAGTATTTATGATGACGTAAAATTTC
CACATTAAATTGGACCCCATTTTACAGGTATGAAATGACAGGGAAAAATTCAAATGCATA
CCATTTCCATATATTGCATATGCGACCGAGTCTAGCTTCTTAAAAAAGATTTGAAAAGGA
CCGACTTTAAATTTTACACCGGCGATATATCTCAATCCCTATTTGGCGCCCACTGTGCGA
TTAAAGTTGTTGGCGCAAACGAGCGCAAACCTGTTGTCTTAGTTGAACGCAGGAATTTTG
CCGGTTCGTTTAGAAGCGTAACAAGTTAACGTGATCTCTGATCCGGTTTTGGGAAGTTTC
AAGCTTTCCGGTCATTTTTTGGAAGCATCGAAGACTTTTTTTTCCAGTTTTTCCTGAACC
GGGGTTTGTTATCTTTTAATTCGTTTTTTTTATTATTTTTCAAATGCACAAACTTTTTAA
ATTCGTGAACTTTTCTCAAATTTGGTAACTTTTGCAACTTCATGAACTTTGTTTCAAATT
TCATGAACCTTTTTTAGTTTTTGCTCACCTTTTCCGGTGAACTTCTTTTTCTAACTTTCA
TGACATTTCAAAAAAATTGAACTTTTGTTAGTGAACTGTTTTCCATCCGTTATTTTTCTT
CACTCTTGCTAAACATTTTTAGTGATTTTTTTTTCAAAATCATGATATTTTTAAAATTTT
CAAGATTTGTTTTCAAATTCATATACACTTTTGGGGAACTTTTTTCAAAGTCTCGTGAAC
TTATTTGAATTTCATGATTTTTTTTCAAACTGACATTTTTTTTCTTGATTTATGATTTTT
TCTAAAAATTTAATGGTCAATAAGACTTGATCAAGAGTGGACTAGTTGACTGATGTTTTT
ATTTAAGTTGATGGGTAGGGGGTGCCAAAACACCACCTCTTGTGATATTCCAACTCAAAG
TGTGACTTTGGGAGTCAATACAAGTACATGAATTTGCATGCAGAGTGCAAAGAAAAATTA
CAGAGCAAAGCCCAAGAGAAGAGCCAAACATTAGAAAAGGACACAAATAAACAGAGGGGA
AGGCTGGCACACAGACCAAACTGAAAACCTTGGTATTCGACACCTCGGGAGCGAGCTCTG
GTGAGCAGCTCGTTCCACCATCGATAAAGAACCACAAGAAGGCCTAGGGAGAAAAACACC
AACAAAAACAAAAGCTTGTGAGGGAACATCATTGCCACGAATAAGGGGTGTCGCATAGCC
GAATTCGTGTGGCAACACCTGTGTGCCGCCGTCAAAGCCGAAAGACGGTGCGTCACCGAG
ATCGAAGGGCGCATCACCGTTGTACCACTGTCGAGGTCGAAGGGCATCTTATCGTCGCAG
CCACACCAGGAAGTCCATGCAAGCGTCGTCTCAGCCACAATGAAGCATAGCCCTATCCAT
AAGGATAATCAAAGTAGAAGCATGTCGAGAAGCATGAATGGCACGAACGAAGGGCGTCGA
ATAGCCGAGTTGGCGTGTGATACGTGTGATCTACGTTGGATTTTCCGTGAAGACGAACGG
GTTATCACAACACAATGTGGTCAAGTATTTCCCTCAGTTATGAAACCAATGTTTATCGAA
CCAATAGAAATATCAGCAACAACCATCTTTAGTCGGTACACACAAAAGAACAAACAACTT
GCACCCAACGCGGGAAAGAGGGTTTTCCATCCTCTTGTCTTCGTATTTGCAAGCAAGTGA
GGTGTGTTGATAATTGTAGATAGCAAGAAAAAATAAAAACAAGTAAATGATAGCAAGGTA
ACGAAGGTTTTACCAATATGTTGTGAATCGACCCGGGGCCATAGCTTTCTCCAATGGACC
CC