Contig Data
morexGenes
Links



Map Locations of contig_51793 (4664 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51793

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66583 1 993 bp MLOC_66583.1 Available Available LOC_Os07g24000.1, FRAME:-3, EVALUE:4e-81, 13107.m02367 protein AWPM-19-like membrane family protein, putative, expressed





CDS Structure of MLOC_66583






Contig Sequence (4664 bp)

>contig_51793 4664 assembly3_WGSMorex_rbca.fasta
CGTCTTGCAAGCCGGAGAACATCGCCGTAAGTTGCGCCGCCGCCGACAGCGACAGAAGGA
GTTGGCTGCATAGGTACATACGGGCTTCGTCGACCAGATGTCTCCTCTGACACGTCAGGC
TCCCCTCACCCCATCCATGCAAGCGCCGGCGGGGATTGTGTCGTTCGACACCGTCGAGAC
CAAGGAGGAGGAGGATGAGACGGCCGGCTGGACCCTTCCGGAGAGCTTTCCGATCATGCA
GCAGCCGTCGGTCCATGAGTGTGAGTCCCTGCAACTCGTTCAGGAGCGGGTGAGCACGGT
CAACCCCACCACCCGGATTGCACTCAACATGTTCGACAAAATGTCTCAACAACACCGGAT
ACGTTTGCTCCTGTCCGATCTAATGATTAATGTTTCGCATAGTTCACTAGTTTGCACAAG
ATTATTGGTTGCAAACCATGAACCTCTAGGAGACATACTTGGCAAGTATGATCAATGAGA
ATGAAGATCCGGTCCATGTAGAATATGAAATGGAGGAGACGGGCGCTTTTGTGATTGGGG
CAACATCTGTTCCCAATCCTACCAAGAAGAAGGAGAAGGGCAAGACGATGAAGGCAAGAG
GGCTTGCTTTCTCAAGATATGAGGATATTTTGTTGGTCAAATCTTGATTGAACACAACAT
CGGATCCAATAAGTGGCACAGAGCAAAAAGGGGAGCGCGTATTGGAGAAGATTTTGAAGG
ACCATCATGAAAGAAAGGAGTATGTGGAGCTGCATCCTATCATGAGCACCCGCAAGGCTA
TTGATAAAATTAGTTCATTTACTTGGCATTTACAGCTGGTTGTTTTTTTGGTTGGTTTTA
AGAATGACATATTTGATGTCAATGGTTTCTCAAATAAAGAGTTTGGTGTGGTTTCTACAA
TTATATCTAAAGCTGATGGTTTTGTGTGGCAATTAGTTGTTGTGTATGGTTCTTCTTACC
ATGAGTTCAAAATGGATTTTATTGTTGAATTGGATGACATTTTAGATGATGCATCTTATC
CCATTCTAATATGTGGTGATTTAAATTTGGTGGTGGTGGTGGGGGGGTGAGTTGGTAATG
TGGCAACCACCCGGTAATGTAGAAACTAGTGTGGGTACATATTTGAAATACTAGAAAATT
TTACCAGAACAAATTGAGCTAGTTATCAGTTACAGAAGATACAAAAACAAATTGTAGCAG
AGTCACCCATGATGTATAGCAACAGAAGTTTAGAAAATGAATTTTCATAGATAAAACAGT
GGCAGCGCCTGTCCGTGATCCCCATGTACCTCCGACCCACCACCTCAAAATCGTGCCCCG
TTCTACAACCCTCCCCGCATTTTTTTGAAATAAAACTTCTACTTTATTAATTAAAAATAA
TAGTTACATCGTCCAAAGAAAATATACAATATCATTCATTGGCTCCTCAAACCAATCTCT
AGTGGGTGAAAATTTCGCTATCCTGGCAATTTCATGAGCCACCTTATTGGCTTTCCTATT
ACAACGTTGAAAGCTAATTTGAGGAAAATCACAAGTCAAAATATAGCAGTCATCAAAAAC
TGTCGTGCCGGTCCTGCCCATTGTCCTCCATTATTCATTGTATCAATCACTTTCATATTG
TCCGAGTTTACTATCACGTGATTGCAATCCGCCTTTTGTGCAAGCAATAGTCCAAACTTT
AGAGCCAAAGATTCGACTATTAAGACATCAGTACACCAATCGATTCTCCAGTATCCACCA
ACGATGAAATTTCCGTTATCATCTCTAATAACCGCCCCAGCCGTCCCTTGGAGGAAGTCG
TGATCAAAAGAGGCATCAATGTTCATCTTCACAAAACCCCTACGAGTGATAGTCCATCCC
CCAATAAGCCCAATCTTATTGGTTGCTTTGGGAGAATATGCATTGACGAAATTTGTCGTT
ATGGCCGGAGCTTTCATTGAAGTTTGATTTGCATCTTGGATCTTTCCTTCATAAACCAGT
TTTCGGCTGTCCCACCACAAATACCAAGCTGTTATAGTGATCAACTCACGTGCATTCTGG
ATGCCCAGAATAGTTAGTTCCTGATCTTGCATAAGAAGTAAGAGCATTCCGGATGCCCAG
AATAGTTAGTTCCTGATCTTGCATAAGAAGAGCTTCCATTGAAGTTTGATTTGCATCTTG
GATCTTTCCTTCATAAACCAGTTTTCGGCTGTCCCACCACAAATACCAAGCTGTTATAGT
GATCAACTCACGTGCATTCTGGATGCCCAGAACAGTTAGTTCCTGATCTTGCATAAGAAG
TAAGAGCATTCTGGATGCCCAGAATAGTTAGTTCCTGATCTTGCATAAGAAGTAAGAATT
CTAGAACCGTCTCTTCCGCCCTATCAACACCACATGCTCTATTGATGACATCATACATGC
CTGATTTTTTTTCAAACTTCTTTCGCCTTCTCGCACGAAACAGAATATGTTTTGTATTTT
CCGGACCTTTTGAGCATGATGGATAGATTGGTAAAATTTTCATGTGTCTATTAGCCAGTG
TCACTCAGCATGGTAGGGTTCCCATGCAGTGTATGCCATGTGGTCTTTAAAATTCCTAAA
CAAAATTATAAAGGAAACATTGACGCGATGTTACAATTTTGATGGGGTGACGAGGACAAT
CAGAAAAGAATGACGCGATGTTACAATTCTGATGGGGTGACGAGGACAATAAAAAAGAAT
GCATTACAATTCTGATGGGGTGACGAGGACAATAAAAAAGAATGCATTGAATGGTCTGGT
GGGAGATGTGTGTCCCAAAAGAACAAAGAAGGATGAGTTTCAGAAATATACATTATTTCA
ACCTTGCATTATTAGCAAAACAAGCGTGGTGTCTCATTGACAACCCTGACTCCTTATGTG
CTGTTATCTTGAGAGCAAAATATTTTTAGGATAGCGATTTAACGAGTGCAACTTAAAAAA
AGATTCTTTGCTTGGATTGATCCAGTCACAAACTCATGGGATGAAGATTTGGTGAAACAA
TCGTAAAGGGTACTTGCAATTCCATTGCCCATGAATAACATGACGGATTTTTATTGCTTG
GAGCTATAATTAAGAGTTATAAATAATTGAAGATATAAAAATGGAACGTTCACTGCTCGT
TCGGCTTATTTGAAAGAATGGAACCAGCAAAATTATTTGAAAGAATGGAACCAACAACAT
GGAGAAAAAATACAACATGCAAATGGAATAGATAGAACTTGACATAGAAAATCTAACATA
ACTTGTGAAGATTCATGTCGATCCATGCGTGTAGCCGACATGTATCTCGAGAAAGATTTG
GAAATTAAGGAACACGACCTGCAAAGAATGGTTAGGTAAGAACACGGCGCACCACTTAGA
TTTTCCATTCATTTATAAAACACTAACAAGAACCAGCCGGTAGTACAACATGCATGTACG
TGCGTATGTAATACCAGGTCCCCCTAAAAAAAGAAGGGAACCATGAGTAGTACATGCGTA
CTATGCTCACACACATACCCCACTGCCATGCCATGGATCGACGATGCATACAACCTACTC
TTCTGCTCTCTAACCGTACGTGACACAACTAACACAAATACGTACTAGTACAGTACAACT
TATTATCCACCCGTCGCTTGCCACGGCCAAGTCTATCCTATTTAGACCCTTGCGACGCCG
CCGGTGTCCATGCCCTTGTTGTGGTGGTCACCGACGCCGGCGCCGTAAGCGTGCTCCGCC
GGATACCCACCATTGTTATTACCAAACTGGTTTCCGAAGAGCCCAGAGTGGAGAGCAAGC
ACGTACAGGAGCTGCGTGAAGGCGAGGATGATGACGAACGCCTCCAGCACCCTGAGGCGC
CACCCCCGGTACCCGCCGACGTGGATCTCCTTGCACGCCAGCCCGAAGGCCAAGGCGGTA
ATCGCCCAGGCCACCAGCGAAGAAGAGGCGGAGGTGGCGAGGCTGTCCCCACGCCAGGTA
CGGACGTGGTGCACTCCGGCGAGCTTGGATGCCGCGCCGACGACCCCGGCAAGGATGGCG
AAGACGAGGAAGTAGAAGGTGGCGCCGTTGCCGCCTACGCCGGGGCGGTTGGTGATGCCG
TTGATGAAGTGGTTGAGGTTCCAGCTCGCGAACCCGATGACGATGATGTACATGATGAGG
TTCAGCACCAGCAACGGCGCCACCATGTTGCGACCGACGCCCGCCATTGATGGAGCTCTG
CTACTGCTACCTTCTTCGTCTTGGTCAGATGGAGATGGAGATGGAGATTGGCGCTGGTCG
AGTGATGCTTAGCTACGTGCTGGGATTGGGTTGGTTGCAAGGAAGAGTCAGTCGAATGGA
AGACGATGATTTCTGGATGAGGTTTGTGCTCTGGTGGGATAAATATATAGTATATGTGGA
GAGGTGTGCATGAGGGTTGGGACACGCGTTATGCGCCGCTTACGGGTGGTGCGACGCGTG
GCGCACAGGGGCTTTACACGCCACGGTAGCAAGCTTGTTTCTAGTCCTGGCCACTAGAAA
CATATAGAAATACACTAGATGTTTTTAAATATAAATCTTTTAAGCGATTTCACTAGATGT
CTACATACAAAGCAAAATGATTGAATATACACTCTAAAGTATGTCTATATACATCCATAT
GTAGTTCACTAGTGAAATCTCTACAAAGACTTACGTAATAACTT