Contig Data
morexGenes
Links



Map Locations of contig_51791 (3999 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_51791

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66582 2 1801 bp MLOC_66582.1 Available Available LOC_Os05g39560.1, FRAME:+1, EVALUE:2e-158, 13105.m04171 protein metal cation transporter, putative, expressed





CDS Structure of MLOC_66582






Contig Sequence (3999 bp)

>contig_51791 3999 assembly3_WGSMorex_rbca.fasta
CTCCATTAAAGAGCTTGTATGATGTGCTGTTGGTTGGTGATGTGGACACTTATACTAACG
ATTGAACATACGAACTGTTGGAGATGCTCTGAGTAACATGATAAGTTACTCAATTTCTCT
CTCTTTTTATTAATTAATTGTACGTCATATTTCTTGCTTAATTGACATCTATATTATTAT
TTATGTTATTTTTATTGTGGATAGTCTAATATATAAGCACGGCCAGCGATAGCTAGCGCA
CTTTGTCTCGCGAAGCAGGTAACTGGCCTCTGATATACCGTTTCAACCCAGACAACGTGA
GCTGTATGATTAACTCATGGTTATTATGGTTAGTCCTTGTCCCGTCGAAAGAAAACCCAA
GAAGATCATAAGTAGCTGTAGATTTAATAATAGAAAAATGCTACACAACTAAGTAAGATA
AACCCAGAGCATGTGAGCTGTCTGCTTAACTCATGGTTATGGCAATGGGTAGTCGTTGTC
CCGTCGAAAACAACACGCATTAAGAAGGTCATAAGTAGCTGTAATAAAAAGGGTAAGTAA
AGCAACAGAAAACACATTGATAGTACTCTACGGTAGTATACGGCTAAATGCTGGCATCAA
TTTGGCCGCGCGAGGCAGTAGCAAACGTCCAAACCGAAGGATGAATGCCCTTGGCGTGCA
TCGAGACGTGCTCGGCATAGTGAGCACATCTCATCTGGGAACCGCCGCTCGACACCCCGA
ACGGCGGCCTCCCCTACTCCTACTCTACTCCTACAAGAACCCTTCCGTGGAAAAAACGCA
TGTGCCAACCACCGGAAACCTCTGCTGCAGTCCAACACCACCACTGTGCCGTCCTGCGTA
GCGTAGCCGATGGGCTCGCGAGCGCTCGCCGTGCTCTGCCTGCTGGCCGTGTCCGTCTCC
GCCCTGCTCGCGCCCGCGCACGCCGTACCTGCCGGCGGCGACGACGACGGCTGCAGGGCC
GGGTCGGCGGGGCGCGACAAGGCGCAGGCCCTGCGGCTCAAGATCATCGCCATCTTCTGC
ATCCTCGCGGGGAGCGCGGTCGGGGCGGGCCTGCCGTCCCTGGGTCGCCGGTTCCCGGCG
CTCCGCCCGGAGACGGACCTCTTCCTCGCCGTCAAGGCCTTCGCGGGCGGCGTCATCCTC
GCCACGGCGCTGGTGCACATCCTGCCGGCGGCCTTCGAGGCGCTGCGGTCCCCGTGCCTC
GTGGGCGGGCCGTGGAAGCGCTTCCCGTTCGCCGGGCTTGTCGCCATGCTCGCCGCGATC
GCCACGCTCATCGTGGACACCGTCGCCACGGGGTACTTCCACCGGACGAACGCCAAGCGG
GCCGCCGCGGTCACCGACGAGCCGGCGCCCGATGACCGTCCCGCCCGCGGCGACCTGGAG
TCGGCCTCTGACGGGCACCACGGGCACGCGCACGCGCACGCGCACGGCATTTCGGTGCTC
GCCGGCCCGCCCGACGGCGACGAGCTCGTGCGCCACCGTGTCATCTCTCAGGTCAGCACG
ATTCCTTTCCTTCAATCAAATCAAATAGTATCAGCATCTGATTGGCTGGTGGTCCTTTGT
TGCGAAGGTGCTGGAGCTGGGCGTGGTGGTGCACTCGCTGATCATCGGGATGTCGCTGGG
CGCGTCCGACTTCCCGAGCACGGTGCGGCCGCTGGTGCCGGCGCTGACGTTCCACCAGCT
CTTCGAGGGCGTCGGGCTTGGAGGGTGCATCGTTCAGGCCAAGTTTCGGCTCAGGTCTGT
GGTGGCGATGGGGCTGCTCTTCTCCATGACGACCCCGGTGGGGATCGGCGTCGGCATCGC
GATATCGTCGGTGTATGACGAGAGCAGCCCGACGGCGCTGGTCGTGCAGGGGCTGCTGGA
GGCGGCCGCGGCGGGGATACTGGTCTACATGGCGCTCGTGGACATCCTGGCCGAGGACTT
CAGCAAGCCCAGGGTGCAGAGCAGAGCGCGGCTGCAGCTCGCGCTCAACGTGTCGCTGCT
GCTCGGGGCTGGCCTCATGTCCCTGCTCGCAATCTGGGCATGACGGCACACCAGAGGTTA
TTACCATCTGCGTTGTACTCGTAGGAGGCTGGCTGACCATGGTAGGGGAGCAGTAGCTGT
TTTTGTTAGGCTGAAGCAGCAAGTATGTACAAACCAGTGACCATGATTAAGGCCCTGTTT
GGAACCACTCAGATTNNNNAATCCAGTTTTTATAATCTATTCTATCTCCAAACGTGACAG
ATTATGATGTAGATTATAAAACTAATTGAACAGATTATTAAAAACTCATAATCTACTATA
CACCAGCCAAAATCAGATTATGAATTGCTAATGACCCATTACCCTTGTAAAGTTGGAGAT
AATTACATTCCTACCACCGTTGTCCTTCTCTTTTTTTAAAAAAAAACAGAGGACAGACAC
GTCATTATGCAATGTAAAATCTGGATTATAGTTTATGTAATCTGGCGTCCAAACATGCCC
ACGTAGATTATTTTTATAAATCAGATTATATAATCTATCTTCACAATCCAGATTATCATA
ATTTATTGTGGTTCCAAACAGGGCCTAAGAGCATCTTCCTTCTTCCTAAATCTTGACTAC
CCAAATTTCTCTTTTTTTTAGAAAAGGAGGATATACCCCGGCCTGTGCATCTCGATGATG
CATACAACCATTTTATCAATTATTCATAAATATTATAAAAGGTAATACATCAGTCAGCCT
GAAGCCACCATCTAGGCAAAAGTTGTTGCTACTCTTGTCCCGTTGATGAAGGTGTGCCGA
TATCTGAGCCTAATTCTAAACAAACATCGCACGAAACCCTAACATCTATAGCGAGATGCC
CCAGCCCAGCCACATACCGGGACTGGGTCTCACACCGGACCGACGCCTTGTCGCTCGTGC
CGTCATCTTTCACCGGCCATCTTCAGAGCAGGAACTGACGCACCGACCTTGCCTAGCCTG
CCATCGACGTCACCACGGCGCCAGACAACGCCACCATCCTGCACGTGTACATCCACACGC
GCCCGTCGCCGAAACTCCGCAGCGCCATGCCGCCGTGATCCGTCGTCGGTCCTGTGGTCG
ATGCAACACTGCTCCTCCTCTTGTCCCCTCTAGCCATCACTTGCTCTAAAACGATGCCCC
CAAGAGGAAAAGCGATACTGTGAATGCCATCATCATCCGATCCGGAAGACCCAGATCCAT
GGTTTCCCCCGAAGCATCCCGAGCCTGATGACGCAACCTCAACGACGATGCCTCGACAAG
GGAACGACATCATAGACGCCGCCATCGTCTGCCATGACCGTAGTTGACACGATTTTCATT
GGTAGTTACGCTACCAAGCATGCAACGTCGGCGTCATTGGTCCCTTCAACCGGAGCAAAC
TCCAAAATGATGCCCTGAAGAGGGACTACGACGCAAAAGCACCGCCATCGCTCCATCCAA
AGGAGGTCTAGGGTTTCCCCCGGAGTTGTCCGCGTTGTCATGGAGCAAACAAGGGGAGAA
TCCCCTCGGATCCGTCTAGCTGCCGACATGTCACACCCGGCAAACGCGCCGACCGCAATT
CAGGGACCAAGGCCCACACCTGGGCCCAGATCCGGTCGTGCCGCCGCCGACCAATCTGGT
CACACCACCGCCGTCCCTGGCGACTGCGACGCACCAGCCATCGGAGGGTAGCCCCGCGCT
GCCCGAGGCACCAATGGCCAGATCTGGAACAGAGCGACCACTGACCACCATAGGAGTGCC
CCCGAGCGCCCCCCCACACGAGCACTAGGGGGAGTCACGAGCGCGATGCAGACGCTGCCC
CATGAGTCCTCGCCGGCGCGCCCCATCGCCAACAGCCGTTGAACACCGCCCGCGCGAGGT
CCTACAGCTAAGGGGAGGAGAGGTCCCGCCGCCGTTAATGCCGACCAGGCTTTGAGCGGC
GACGCGCTCCGACGGCGGCAGGGTTAAGAGGTGGGAGAGGGAGTCGAGGACGCGACGGCG
CTAGGGTTCCACACCGGTCGCCGCGTGAGGGCGACACGG