Map Locations of contig_51784 (9802 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51784

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66580 1 1556 bp MLOC_66580.1 Available Available LOC_Os08g45110.1, FRAME:+2, EVALUE:5e-59, 13108.m04918 protein AP2 domain containing protein, expressed





CDS Structure of MLOC_66580






Contig Sequence (9802 bp)

>contig_51784 9802 assembly3_WGSMorex_rbca.fasta
CCATGCGACGTTCCCCAACAGCGGAGAGCTGGCGTCATTGCGCGCTTGGATGTACTAGCG
AATTATGCACTAAATCTCGATCTTGCGGTGGGAAATGCATAGTATTGTAGAGGCTAGCAA
ATATGGATAGGTAGAAATGCATGAAAGATCGTAACCCGTACTCAAATACTCCCTCTGTTC
CTAAATATTTGTTAGTTCTCCCCAACAACAAATATTATGATAAAAAGGTACTTTACTAAT
AAATGATAGTCTACACAAAGATTATCGCGAAACCAATTACTCCTAGGGGTCGCTTTTGGC
GAGCCGATGCCATTGCACATTCTAGGCCCATTATACATGTTCAGTTACTTACAATGTCCT
TCAACTTAGGCCCCTTACAACCGGTTCCACTTTTATGTAAATTAATGCAGAAAAAGTGTT
GATGTGCATGACCTTACGATATCTCCTCACCATTCGTCTTAAAACAATTGCGAATAATCC
AATTATCAAGTTGAGTGATCTACAAGTTCATGTAAGTTTTTTTATTTATACCACCAATCT
GTGTAGGAAAAGGCAATGCCTAGGATGCGCTTAGGCACGATTAGGAGCTAGGCTATGGCC
AAAGGCCTCACCAAGGGCATAAGTGAAACTCTACGCAGAGAAAGTAAGAAATTATCTACC
AAACAAGAAATCATGCCATATTGCACTAATATGGCAAAAGGGCCATATTCCGATGGAATT
AGTCGGTGGTTAACTTACTTATATGTCCTAAATTAATATTGATAATATAATCCACATGTA
ATCCAAGATTGAGCATCATATATGTTGGGCATCTTCAAGCTTGAGCTTTTGTCTCTCCTC
GTTCCTCTCATATCAATGTCTCCCCTAGATCTTAAAAACTTCATCCACCAAAAACTTATT
AAAGAAGTTAGCACGCATAAAAAAATATCTTCATGTACAGTCAAGAAAAAGTGTATAACT
ATTATCAAATACTATCTACTTTTTGGCATCATTTTCATAATTTATATCACCCAATATAAC
CTATGAATACTCAAGTATAAGTGGATAACAAAACTTTAACAACAATCTATCAAAATAGAA
TAGTCTGTAGCAATAAATTTAAAAAATATACTTATGTAACTCAAAATACTATGAAAAATT
AGAAAGTAAAATGATATTTTATGAAAGTGTTGTATAAAATTTTCAAAAATAATGATTCTT
CGATAAAAGAAAACAATTCAAACACTACAACACCAGTTTTTGTTTCCGCACAACACATAT
CAAACTTGCAATATTAACATCCCAAAGGCTACTCTTGGTACTTTATTTAAAGAAAGGATA
CAAACCATGACTACTAGAGTAGCAGTAATATTTTAGACACACAAAATACATAAATGATAA
ATATTTGGTTGCCTCTCAACAAGCACTTTTCCTTTAATGCCTTTTAGGTAGGCATGATAG
CTCTATCACGTTTTCACATCATTTAAAGGTAAAACATATGTAGCTCTCATAATAGATTCA
TAAAGTAATTTAATTTTATTCCTGGGGAAGTATTCCATCCCTTTTTAATGGAAACTGAAA
CCTTATGTTGTCCTCTTTCATATCAATAATCGCACCAACAGTTCTCAAGAAAGGTCTACC
AAGTATTATAGGGCATAAGGATTTCATTGTATACCCATAAAAATGAAATCAACGGGGACA
CTATTACTATGTTCTGTAATACGAACATAATACTTTTTTCCAATGGTTTCTGTATAGTTG
AATCTGCAACATGTAAATTTAAAGAGCATTCAGACATAGGATTCAAACCAAGCACATCAT
ACAAAGCTTTTGGCGTGGCGGAAACAATAGAACCCAAATAACATAAAGAATTTGATTCAT
AATTGTTGATTTAAATCTTGATAGTATATTCCCAACCATCCTCTAATTTAGGAATTGAAA
CCTCTTGTTCTAATTTTTCTTCACTAGGTTTGATAAGTGCTTCAACACTATGTTTAGTAA
ATGACTTATTTTGTTCATAAGGCTTAGGAGGGTTCATCATGGGTTGAAAATTATAATACA
TTGAACATAGAAATTATCATAATTAAAGTCCTTAATAATCCCATATTAGTGGGACTAGCA
CTACCTAAAGTCTTGACCTCTCCAATCCCACCTTTTGACATTTTTATCACAAGATTTATT
ACTCTCTGAACATATCAGACGCCTTGTAGGTGAAGACATGACCTCTCCAATCTCATTATT
CTCATCATATTCAACATATTTAACACCTCTAACAACGAAGACTATAGGAGGTTCACTACT
ACTCAAAGGTTTAATATCCTCATCCTTAGAAGTAGAATAAATTTCAGCTTCCCTAGCCTC
TCTTTCTCGTCAGGATCTCAACACAGAAATCATATTAGATTTATAATGTATGGAAACTTG
GGTAGCTTTTAGAGATTCAGGCATATCATCTTTAGAAGGTGGTATTTTTTTATCTTAAGA
AAATCAATTTCATGGACGAGACTATCAACTGTATGAGCAATAGAATCAAGTATTCCAATA
AATTCTCCTACTATAACATTAAAAGCCTTTTGTGAATCAATGAAATATTTTATGACAACC
TCAAGTTCAGTAGGTATTCTATTATTGTTGTTGTAATAATTTCCATAAGAATCACCATAG
GATTTTGAAGGATTAGGAGGATATGACCTAGTATTATCCCCAAAATTACTCATATGAGCA
TTGTTATTAAAATTATTCCTAGAAATAGAATTAACATCAACTTGGTCCTTATTTTGTTTA
ATAAAATAAGCTAGAGGAACACCATTATGATCAATAGGAGCTTGTTTGGAAGTAAGCATA
GACATGATCATATCAACCATTTCATTCAGAGAAGAGATATCCTCAACAAAATTTACCTTC
TTACTAGTTGGAACTCTTTCGGTATGCCTTTAGAGATATTTGACATCATGTTATAAAGTA
GCTTGATTGTTGTCCCAAGAGTGATTCCCATGAAGGTTCTACGTGTAGCTAAATCTAATA
GATTCCTAGACATAAAGTTTAGCCGTGCATAGAAAGTTTGCACAACCATCCAAGTATTTA
AACCATGTGTAGGACAAAATTTAACCATATTGACGGTGTCTTGGACTAGGGGGTCCTGAC
CTAGTTGATATCATCCATGGGGCAGACTGGCGGCCCAGTACCGAGAGAAGGACTCCGGAG
GCCTCTAACCTATGTTGTGGGACCAACGGACTCCAAGACTATTGATAGATTCAGCACGTA
TCCTTTAAGGTTGGCAATCGACCATGTGTAACCCTAGATACCCTTGGTACATTTATAAGC
CGAAGGGTTTAGCCCGTAGTGGGAGCGATTCATCATCATCATCATCATCACCNTCATCAC
CATCATCATCATCATTATTATCATCGTTGGGGTTTAGACCATAACTCAAGATCTCATGGT
AGATCAACTTTGTACTTTGATACACCCATAATACAAACAAGAGGAGGGCATAGGGTTTTA
CCTCCATCGAGAGGGCCTAAACCTGGGTAAAAACACAGTGTCCTTTGTCTCATGTTACCC
ATCGATCTGATCTAACAACTAGGGCCCCATATCCGAGGCATGTCGGTTTTGACATGGACA
TTGGTGCTTTCATTGAGAGCTCGATGTTGGATCATTTGGGACTGATAGATCGCTTGCAAT
TCGATAACAACATTGGTTGAGGGGGACATCTTCGTCCCTGAACAACTTTTCGCCTTCGGC
ATTGTAGTACTCCATGCTGATTTGACCGACCGCCTTGGCCGCATCGAAAATTTTGCCCCG
AACTAGATCATGAGGTTTGGAAGTATGGAGTACTTCTTGGACGTCCCAGGAGACCTACTT
TCGCCAGAACAGGTCTTAGATCGATTTGAAGGACCCTCCGTCTCCAAAACTCCGAAGAAG
ATCTGCGATCTGACCCTGAGTTGGACCCTCCGACAAGAAAATTTTAGAGATGGATCGGTG
GCTTGAGAGTATGATCTGGTCCATCTTCAGATGGCGACCAAGAACTAAACTTATCCTTGG
ACCGGCTGTCGGGCCTCGAAGAAACTTCCCACACTGCGGACCTAGAGTCGGCTCGGTGTG
GTCAGGGTGACGACCCGCTTCAAGCAGCCCGAATAAACCCCTTCAAGTTTGTCAGGCTTA
TAGCCAGGCTCTCAACGCCGACGAGCTCTTGCAGATAAACAAGGTGTTGGATCGAATCCA
GAACCTGGCGATCTCTTCCGCCGTCTATGATCAGTCAGATGTAAAGGTGACGATCGGGGA
ATTTTTGTCCCACCCACCACTCACCTAGTCGCCACGGTCGAGGACCTAACCAACACAGTT
GACTTTGGGTACGACGGGGCCACTTACAGGGAATGTGGAGACCTCGAGTCACGTGCGGCT
ATATCCCGGACAAGGAATTTAGCCATAATGGCTACATACGACATCTAGATGGTCGACACT
CTAAAAGAAGATCCCAATGAGCAGCCTAAGGAAGGCTTTGGACGACGTCACCCAAAACAA
AAATCAAAGGGCACAAGCGGGGGCAAAAGAAGATCGATGCCATGGTCGCCACCGACAACA
GCGCTGCCCTGATGCCACGGAAAACCAAGATGGGAACAATCAAGTCTCACCCGCCCAACA
AAACAGGCCAATGGGGACGCCTCTAAAGGATGACCCCAAAAAAATGAACACTTTCGACGA
TAGGTCGGACGAGGATTACCTCCCCAATTCCAAGGATGAGGTTAGCCTTGGACCCAAAGA
CTTCATGGTGATGACAAACCCAGTCGAGCAGATACATTTCCACTGCCGGCTCATCGCCAC
GACAAGATGCTTGAAAAAGAAACAACAATATATGCACACTCATGAAAACATGCTCAATGA
AAATGGATACAATTACTAGAAGTCGAGGAAGAGCTCGATTCCCTATGTGCGGCAACCAAG
TCGTTCCCACGTCGGAAGTTGTTGCCTGATTTTGATCACGAGGCAACAAATGAAGATTTT
CTCTTGTATGGCAACACGAATCAGACAGACCGCCCCCTAGAGGGCGAGATCAGCCAACAT
GGGCACATAGAGAGCCCCTCGCTAAAACACACCCTCATGGCAAGAGCCCGATCAAATATC
CCAATCCTTCGACCTTCGCACTAAGCTTGATGCAAACAAAGTGCCCCTAGATCCATTTAT
GGGCTAAGGGATCACACACATGTGGGCTTGGAAGGATACGACGACTTGGGTGGTTGGGCA
TCTTACTGGGGTGGTTGGGCACTTGATCCCTGGAGAAGGGGTCACCCACCCCCAAGATCC
TCGCGTCTGGGTTTGACCCCCTAGTGGGTCGGGTTGTTTCGTGGGCTGAGCCGTGGCGAG
GCCGATTTACCTCCAAGGGGAGTAAAACGGTCCTCATTGATGCAAACCTGGCGAGCCTAC
CCATGTTTATGATGCAGTTGTATATCCAGTCGGAGAGCGTCCATAGCTCATTTGATAAGG
AGCTCGCCATGTTCTTATGGCAGGCCAATGACGGTCGATAGAAGTACCACATGGTCAAGT
AGGCAGATATCTACGTATCTAAGGACCATGGCGGGTTGGGAATCTCGGCCTCCCGCGTTA
TGAATACCTCCCTCATGTTGCGGTGGGTATGGCTTATCCTCCGCAATGAGGTGGGACTAT
GGCTCCAACTCCTTCATGCAAAGTACCTAAGGGGTGAGCCGCTACTCGCTTGCTCCCGTG
CGGGTTGATCCCAATTCTGACGCGCTATCCAAAAGATATAGGAGGAGATTTGCCTAGGAA
TATCCTTTAATATAGGTAATGAGGAGGGGACCCACTTCTCGTTGGACCCATGGGTTAGGG
ATGAGCCACTTAGGGTGTGGTTTCCTATCCTATTCTTCACCTGCATGTACCCATCCCTTC
TAGTCTCTAACACCCTCCTCGAGGGGCAATGGGTTATTAGTTCACGCGGCCATTCAGATC
GATAGAAACGGACGAGTGGAACCGCGTGCTTGACGTCTTGCCACAGGTGCTCCCGGATCA
CCCGGATACGGTGGCTTGGCATCTATCCCCTTCGCGGGAATTTTCGATTACTTCGGCATT
TCAGGCCATATGTCACTCCCTCATTTTACCATGGCTCGCGTCGTTAGGGAGTGCCCCTGC
CCCTAAAGATCAAAATCTTTGTGTGGCAGTTACTCCGTAACCGCATCCCTTCGGGGGCGG
AGGTGCGAAAGCGGCACAGATCGGGAGACGAACGTGCCCCTTATGCGCGACACCAGATAC
GACAACACACATTATCCTCATGTGCATAGCGGCGAGGGCCATGTAGGAATTCATTTGTGA
GGCTCTTGGACCCGACTGGGAGGTCCAGGACTTTGCGGAGTTCCTCCAATTAAGGGCCAA
CCACATCGGACGTCGCCGCCGCATATTCGGGTTGATCTTTACCGCAATGGCTTATACCCT
TTGGACAACTCAAAATAAAATGATCTCATTTCTTTTATTTTTTTTAGGTTAGATTGTGCC
GTGGGCCCGTCGGCCCGGTTTTTATGTATGATTTTACTCGTATGTGAACTTTATGAATAG
TTGTTTTATCTATAAAGCAAAGCCAAAAACTATTTCAAGAAGTCTTTTGTATAAGAATTA
AGAAAAACAAAGTAACCCTGTCTATGTTCATCTTGGGTCCGAGAAGCACGTGATAAATGC
CACCGAAGGCATGGAGATTCAAAGGAAGAGGCATATCTGATGATTTTGCCCTGCCACAAA
ACACGTGGCATGAGTGGTGATCCCGACGTCATCAAGGAGAATAGCGCGCCGAGCCGCGGG
CCGGAGAAGAGGACCCTTTCTGCACGCTGCGTATCCACCGAGACCGCTGCCACAGCATGA
GCAAGACACGGACAGCTGTCCGTTCAGGAGCTGCGACACTTGCGTGCATGCATGCGCGAA
TACACGCGCCCACTGCACGTGCGAGCGCTCAACACCTAGAGCTCTTTCTTCCGATGTCCG
ATGGTCGCTGCCAAATCTTAGCTGCCATGGAACAAGCCAGGCCACGTAGCACGGTTCGTA
CGACCCCTGCACAAAAAACTAACGCCATGCCCAATTGCTTGCTCATGCCATGATGTCGTA
GGGAGAGATGGATAGAGAGAACGTACGCACTGCTGCACTGCTGCACACACACACACATTG
ACGCATTGGATGGATATATAGTCACACGTGTTGCCACTGAAAAAAAGGAAACATGGAGAA
GAAGCTCGTCCAAATCCAAACCCCCGGGCGGCTCGCTGACCGAGGCGTCGTCGCTTGAAC
CTGTGCGCGTGTGCCGGCGTGTAGCCGCCACGTGGGCCTGGCGCGGAGACTCGTGGAGCC
CACGGCGTCGCCCATGTGTCCTGCTCGCCCGGCCCCACCCCTTCGTGTCGAGCGGCCTCC
TTACTTGGCGCACGCCTGGGATACCTCGGACGCGCTCCCTACACGTCGCCTCGCCGCCGT
CTTTCCCGCCCTTCGCTTTTCCACTTCACCCACCTCTATAAATACCCGCCTCCCAGTCCG
AGATATATACTCCATGCCAACACACTCGCTCGTCATCAGTCCATGGAATCAATGGAGCCG
GAGGTGGTTGCGGGGATGAAGCAGAAGAAGTGCTGCCCGCTCCGGCGGTCGCGCAAGGGC
TGCATGAAGGGCAAGGGCGGCCCCGACAACCAGCAGTGCCCCTTCCGCGGCGTCCGCCAG
CGCACCTGGGGCAAGTGGGTCGCCGAGATCCGCGAGCCCAACCGCGGCGCCCGCCTCTGG
CTCGGCACCTTCGCCACCGCGCTCGACGCCGCGCGCGCCTACGACGCCGCCGCCAGGGCG
CTCTACGGCGACTGCGCCCGCCTCAACCTCTCAGCGTCGCCGTCCCAGGTGCAGGTGCAG
GTGCAGGTGCAGCTCCCGCCAGCTCAAGGCAGTGGAGCCAACGGTAACTCGCCGCCGGGG
ACGCCGTGTTGCTCCTCCAACAACTCCAACTCCAACTCCAGCGCGTCCACCCCGACCGGG
ACCCCCACGGACGTGGACTGCAGCAACTGGATGCAGCCGTCTTACTGTTACGGCACGGCG
GAGGCGCCGGAGGACTTCGAGGCGTACGTGACGCGGCTGCCCAAGGCGGAGGACTTCGGA
CTGGAGGGGTTCCAGGAGGTGCCTCTGGAGGTGCTGGCGGAAGCCGGAGGAGGGGTCAGC
ATCTGGGACCTCTCCATCGGCCCCGACATGATGGCAGCGGCAGCCGATTCTTCAGCTGCT
GCCTGCACCGTCCCGCAACAGCGGCTGCAGCAACCCACCTGCTGAGGTGCAGATCCACAT
AGAACGGAGTGGCGATGATACATACTCCTATAATATATACTCCGGAGTGACATGGAACGG
AGTATATATAGTACATATACCGCATGCGGCATGCATGCTAGTTAACGGCGGTGGTGCATG
CAGCTGGATAGCTAGTTTAGTTGAGTGTTTCCTTTTTCTCCATCGTTGCAGTAGCATACT
ATAGCTTTATATCGGCGGCAGGTGGGCGTGCAAGTGTGTGTGTGATATATTCGTGCATGG
GAGAAGGGGTAATGAAATGATCAGTCTAGATGTTGTGCCTGGTGCTATTGGAGATATAAC
AGGATTAGAAGCATCTACAACCACGAGCCATATTTGGCCTAGCCCTTGGAGCATGATCTA
GAGTCACACCTTCGCTTTGGCCGCTGCTTCCGTCGTCGCCTCGCGTTTCGACTACTCGAT
GGCGAGTCCGAGGGTCATGGAGGCGGCGGCTCCCAGCAACTCGATAGCGAGTCAAGGGTC
GTGGTGGCGCGCATCAGCCTCCTTCGGTTCGGCCTAACAGGAAGGGCGCTCAAGAACGGA
CGCGGCAGGCTGGCAACGGTGTTCGCATTGTGTCGATGGGCCATGGGGGACGGCGTGAAG
TCAGAGCTTCTTCTACCACCCTGGTCTCCTCTACGTCGCGCATCGTGTGGCACGACAATG
ATTCCCGCTCGTCATTGGCGCCGGATTCATCACCAGACGCTGGACGCTCGCCATAGATCC
AAAAGGATGGGACGTGGAGAGGAGGAGACAGAGAGAAGTAGAGTGGATAATGAGTTTTTT
TTGTTGTTGAGCACATCCTATCTCTATGCTCATCTTGAGCCGGCACATTATTTTAAAATT
AACAAAGTCGTCATTAATATTTTCATAGTCAACGAAAATGTCTTTTTTCATTGAATGCAC
AAAATTAACGAAGTCGCCATTAATATTTTCATAGTCAACGAAAATGTCTTTTTTTCATTG
AACGCCCATCGTCGAAGACCTAAAATATATTTAGATTTAAACTTTAGTTGACAAAAAATA
CCAGTCTTTTTAACCATTCAACCATACATGAGTTGGTTTGCAGTGGGTAAGCTAAAGAGA
TAAAATTGAGAATAATTTTCATTGATGCTGTGTTCTACAATTGACCGCGTCGTTTCGGAA
AGACACTACAACAGTTGGAAAGACATAACGATGGTTCGTTATGCACCGTGTGGACAACAC
TATGATTTTTTTTTTATAAAAAAGGAGGATGATCTCCGGCCTCTGTATTTGAAAGATGCA
TGCGGTCATATTATTGATTATTTTTGAGGACATTACATAGCAGTACATCAATATGCCTGA
ATCCACCATCTTAACAACATCTGTCGCTACTCCTATCCATATGATGAAGGGATGCAAGTT
GGACCAAATACCAGACCTTTCACCTAAGCCTAACATCTAAAGCCGGAGACCCTGACCGAG
CCACATATCGGGTCCGGGGCACAAACCGGNNNNNNNACTCACATGTGTCGTCGCCGCCAT
CTTCCACTGGGCCATCTTCAGA