| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_51772
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_66577 |
2 |
1624 bp |
MLOC_66577.1 |
Available |
Available |
LOC_Os12g33070.1, FRAME:+3, EVALUE:1e-119, 13112.m03374 protein myb-like DNA-binding domain containing protein, putative, expressed |
CDS Structure of MLOC_66577
Contig Sequence (6139 bp)
>contig_51772 6139 assembly3_WGSMorex_rbca.fasta
TTTTGTGCTTAACATATTAAACGTTAGTTTTATTCCTCATTTGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACATCCACGTCCTTTTCAATGAT
GCATTCAAACAATCGTGTGTTAGGTGATCATCATACACGGTCTTCGTAATTTACGTTGTG
CGACGAATGAGAACATAAAACTTTTTGGTGCGATTTTTTCTAGTTAAATGACCATCCACG
TCATTGCATAAACTCCATATTTTAACAGAAGTTTCAACTAAGTTTCGCAGTTGCATTTTC
GTATTTGGACAAACATAGCTCAAAATGGAAGCCTAATCATACCTCACACTTACTAAACCG
ACTTAGTTGAATTCATACTTATTAGTTAAACATAGCTACTTGACTTAAACATAGCTGTAA
TAAGAGACTAGCGCTCTACACTAAGACTACTAGGCATATTGAAACACAGTTGTTGCCGCA
TCATACCCCAACCCCCGCCGATATGCCGCCTTATGCCGCATGGCCGTCCGACAGGATGTG
AACGAATTCACCATCCAGAGTGTTGTCTGCGTCGTCCTTAGTGCCCTAATGCTTGAGGTA
GTGATCGCCCGATATCTCATGTTGGTATTGTTGCTCTAGTTCCTTGATGATCCACCGCGG
CTCCTACTACTAAGCCATCCGCTACTCCTACTTGCGTGTAGTTTCAAGGGAGGCGGCTAT
GGTGTCTTCGATCTTTGCCTCCTCCTTCTCTAGCTCACAACCATCAATCTCACCGGGCAA
TGGCTCCATGGCCTCCATCACACTTGTTAGAGTGAAAAGGTTGAAAACAAGGATCTTCTA
GGGTTGTACCGGCATATGCCCAAACATAAAACCCTTCCACCATTTGAGATCACTAGAATG
CAATGGCTCTGACAAGCCCAGACATTGTCTCTAGGTTCACCAAGAGCCAATCATGCCCCC
CTTTTATAGAATAGTAGTTATTTTTTCTATTGTTATCTCTATCACCTGTGAGGTTAGGAT
GTAGAGAAGGTGTTTCAGATCTTAAGCAGTCTATGAGGGAGTGGATCACCAAGGATATGT
GCAGTGTGCCAATTTCAACATATTAAGAGCATCTATAGCCCTTCCCCTGTCCTTTAGTAC
CCAAAACTCTTCCTCTTCTTTAAACACCAAAGAGTTTGGGGATTATACTTTTTTTGCACC
TAGCCCTTTCCCCAAAACTCAAATCCTCAAACAAGCTTGTGCCCACTTGAAAGTCTCACT
CCACCTTCTTCTTCCTTGCTCCTTCCACATGGAAAACGCCGTGTTTTGGATAGTATATGA
TGTCCAGGAGCTAGCTAGGAACCAGGGTAGATGATCTGCAAATTAACTTAATAGAGGTTC
ATTGACATAAACGTGCGAGGAGGGATACGATGAAGTCAACGAAATTTGTCCTTCACGGGC
CACAGTTTGGGCACATGTTCACATGAATAGGTTCTTCTCCTTTTCCTTCTCCTAGTGGTC
TGGGATGCAATCACTCATTGGAATCGGTGACGCTGGCTAGCGTCCATGTTTCTATGTACG
TGTTTCTCCTTCGTAGGTGATGTAGGTGGGGTACCTGCTCTTCCGACTATGGTGTCGCTC
TACCGTTAGCAAGGACATTGGAAGGAGCATTGTTGTGACTGATGATGACGTGGAAGACAA
GAAATATAAATAATATTGCAGGAGAGGTACGTGTAGGAAGGCAGGGTTATAAGGGGGCAC
ATGTGGTGGGGATGGGCTAGGGGTGGCTCGCAATTAGGTGCTTTGTGTCAGTCATGCTTA
GTCAAGCGACAGAGAGGTGCGAGAGGAGATTGAAAATGCCGAGAGTTAAAATTTCCAAAG
GGAATATAGTCCCAAGTGGTAAGTTTTGAAGGATGGATCATAATTTGTTTTGGCACTAAA
GGTATAGGGGAGGTCTGATATGGCTTGATTCCCTGAACAATTTTATAGAAGGGTTAAAGG
TTTCCAGGTGAAGGGCCATAGCTCTAAGATGAACGAAAACCGTAGAAGTTTTCATTTCCT
CTCTCGCAAGGCGACTAGGGTACAGTCTCCCTCCTCGATCTTTGTCGGCAAGCTATCAAT
TCACCCTCTTCCCCTTTTCCTGCTTCCCTGGCACACGATGGAGGGGAGGAGAATCCTGAT
GCCTTGTCTCCCGCTAGCAGATAACTTAGGGCTTAAGTCCTGACATGGGGCAATGCGTGG
GCGCATGGAGATGCTTCATACTCGAGGGGGTCGTCTAGGCTCTGATACTCCTTGAGTTCG
TCAAGTGAGACGAATTAGACAAAGCTCGGGCGTAGATTCCTATCGGCTTATCGTGGTAAC
CGTGGCGAGGTTACGATTTCCCTCCTTGAGTATGCGAGGGGGATATTAGGTATGAGGTTC
TTTAGATCGATTCAAGGATTCACCAGCGATGAGATGTCAATATAAATTTAATTATGGTTG
GAATACGTTGTACTTCATATGAATCTTTATAATAGTCTGATTCATTTCGGGCAAAAAAAA
ATCATGTGACATGACTACAAGTCCACTACTAGTGTAGAGTGGTAGATTGTGTGTGGACCT
AGCAATTCCCCAGTCTTCTTTTTTTGAAGGCTCTCTCTTTCTCTCTCTCCGATCCTGCTC
TCCATCTACTTGTCTAGTTTCTAAGCAAAGCACACACCCGTCACCATCACCATCATATCA
TCATCTCCTTCCTCCTCTCGTCCTCCTCTATTCCTGCCCTCACTCCACACAAAAACACAT
ACACATCATATATATAACACACACGCTCGAGTCCATTTCCCCCTTATATATATACACACA
CATATATATACACTTGGTGTACTTGCAGCCTTGGAGATCGACCTGGTCTCTAGATAGGAT
AGCTAGTACAGTCCATAACTACATCTTTGCTAGGAGATCGGGCTGGGCAATGAGGAAGCC
CGTGGAGTGCCCGGCGACGAAGTGCAGTGGTGGTGTGGCGCCAGGAAACAGCAATGTGGC
TGCAGCGGCGGCCAAGCTGCGGAAGGGGCTGTGGTCGCCGGAGGAGGACGAGAGGCTTGT
GGCGTACATGCTGCGGAGCGGTCAGGGGTCGTGGAGCGACGTGGCACGCAACGCCGGGTT
ACAGCGGTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGTCCGGACCTCAA
GCGCGGCGCCTTCTCGCCACATGAGGAGGACCTCATCGTCAACCTCCACGCCATCCTCGG
CAACAGGTACGCCCGTCCGTACTTCGTGCAAGCCGTTCGGTGTGCACGTACGCGCATGCC
ATTGCCATCTCAAGCATGCAGGCGTGCTCCAAGAAAATTATATGTTTGTGTGTTGTTGGT
TACGGGAATGCAGAATGTTCTTTTTTTTTAGGATGAAGAAATTTCTTTTCTATATTATCC
AAATTTGTGTTGCTGAAAAAGTAACAAAATAATACATCATTTTTGCGTTCAGTTTCGTTT
CTAATTAATTATATAGATATATATAACCACCCATTTTCCTCAAGAACAGATGAAGTTCTA
TAACTGACTAACCGATCGAGGTTCGGTGTAGTTATGAGTAATAACTTGGTGACATTATTG
TAAGAGGACATAATAGCTACCTTCTTCTTTATTCTATTTTTCAACATTGCTTTAGAAACA
CACATTGTTGTTTTTGTATATGTATCATTCCATTGAATTACATTATATTTTTAAATGATA
CTTCCTCTGTAAACTAATATAAAAACGTTTAGATCACTAAACTATTTCTATTTTTTTGCG
GGAATGTGAATAACTATTCCAAGTCAATAAAGAACCATCGGATCCACAAAATGTGACTCT
GCAAGTGTGCTAAAAGATGAAAATATATTGACCAGACGATTATCATCGTTCACTAAGGAA
TAATTATTTCTTAGTTGACTGAGCTATAATCATTCCCTTTCTTTGATTGGTCTTTTGCTA
TATGATATTTTCTTACGAGGAAACACATTTTTTTCCGGGACAAATGCCATTGGGTTAATA
AATAACATTAGCAGAGCTAGATGACTAAAGTTAGAACATTCGCAAAATTACAGACTGATA
CTATAAGGTTGTAGAAGCAAATAAAAGGCTCGTTATCGTCCTCTTTTTTTTTTTTTTACG
GGAAAAAGGCTCGTTATCAAGAAGTGAAAGTGATACGTGTGTTTAAACTGAAGACGATGC
ATTTTATTAGTCGGAGTACTACCAGAAATTGTGATTACGACATCAATGAACTAAATTTAA
TTTTCAGTCAGTTGTCTGTAACAATAATCACACGCATAGATACTTGTTGGACATGCATGC
ATAAAAACTCAAGACACGTGCGCATGTAACTTTTTGCAGAAGCCTCTCGATTGATGTTTG
CTTACAATAGAATCTATGTCCTGCTACTCCAGATGGTCTCAGATCGCAGCCAGGTTACCG
GGGCGCACCGACAACGAGATCAAGAACTTCTGGAACTCCACCATCAAGAAGCGGCTGAAG
ATGAACTCGGCCGCTTCGTCTCCGGCGACCACGGAATGTGCGTCACCGCCCGAGCCCAAC
CTCGACGGCGGCAGTGCCAGCTGCCTCGACCTCACCAGCCAGGAGGACGGGAGCCACCAC
GCAATGAAAAGCATGTGGATGGACTCATCCTCCTCCTCCTCTTCGTCTTCGTCGATGCAG
CAGGGGAGCCGACCGTCAACAATGGCTCCGGCGGCAAACAGGGGCTACGGGGGCCTCCTC
CTGCCCCTCCCGGACCAAGTCTGCGGCGTCGCACCTTCCACCCACACGTCGTTGCCGCCG
TTCTTCCAAGACCATTCATCGTTTAAGCAGGTTTCTCCCTTGCGGACCGGTGGCTACTAC
CCTCACGGAATGGCAATGGAAGGAGCAGGTGGCTGCTTCATGGGAGAAGAAGCTGTAGGC
GGTGGAGGCGAACGTAGTGTCGTCTTCAACGTGCCCCCTCTACTAGAGCCCATGGCAGTA
GCATTGCAAGACCAAACCTTAATGGCATCAACTGGTAACAGCAACAATAACCATCGAAAC
ACTAACAGTACTGCAGAGGGCACCACACTGAGCAGCAAAAATGGCTGCAACATCAATGAC
GACAACACCAGTAAGAACAACATCAACAGTGTGGTCTCGTACTGGGAGCAGCATGGTCAG
CAGCAGCACATGAGCAGGAACGTAGTCATGGGGGAGTGGGACTTGGAGGAGCTCATGAAA
GACGTGTCATGCTTGCCTTTCCTTGATTTCCAAGTTGAGTGATGACACGCTGTTGGGGGC
CACCTCCTACCTGCGTGCCTAAACTACATGCATATACGAATATACATATATAATTAAGTA
TATATACACATGCATACGTTAAAGGTAGTCTTTTTTTCCTTGACATTATTTACATGATGT
ACGCAAGATTTCTTCAGCAGCCACTACTTCACTTTTGATACTACATATATCTTTGATGAA
TTCATTCTTGTATACAGATACTCATGCCTATGCAAATAATTCAAGCAAAGTTACTTGAGT
TATATGGTCTTCCTCGGTCATCACAAGGCCATGCATGTATAGTACTCATTTTGTTTCTAA
ATATAAGTTTTTTAAAAATTACACTACGGACTACATACAAATATATGTGGACATACTTTA
GGTTATAGAGTCATCTATTTTGTTTCGTATGTAGTTTATAGTAAAATCTTTAAAAAGACT
TATATTTAGAAACCGACATAGTACATTGTAAAAGAAGCTAGCTAGCTAGAACCTAATTAA
TTAATATGTTTGCAGATAATGCATGCGCGCTTCAGCTTTATAAAAGAAAAGGAATTCCCT
TCATGGGAAAGTGACATCCCTGTTGTTTTGTTCCTTTGCTTCATCTTTTCATTCATGCAC
CAACTGCTTCCCTTGCACATGAAGTCACATTGATGAGCTTATGAATATAGATAAACTTTG
AGAGGTCTCTAAAAGGTGCCAGCTGAGTGAGCGAGCGAGTGAGGGAGATCATGCCTATCA
TGTGCATGCATGGTGTAGGAGGAACAGTCACTCTCACTGGTCAAATGTGTAGGTAGGTTG
CGATTAGAGGCCGTTAATTGGACGGCTGGGCCGTGCGATTAGACTCCAGAAGAATATAAT
GGAGGGGGGGGGGGGGGGG
