morexGenes - Barley RNA-seq Database

Contig contig_51757
Source Contig contig_51757
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_51757 (7969 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_51757

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_66563	8	2080 bp	MLOC_66563.2	Available	Available	LOC_Os11g04030.1, FRAME:-1, EVALUE:0.0, 13111.m00347 protein major facilitator superfamily antiporter, putative, expressed
CDS Structure of MLOC_66563

Contig Sequence (7969 bp)

>contig_51757 7969 assembly3_WGSMorex_rbca.fasta
TGGGTTGTATACTATATAATAGAAGATTTTGAAAAGAGGGCTTACACACCATGGCAAGAA
AAAGGTGAAGAGAAAGAAATGGCAATGAGAAAAATATCGCTTTATCTTCTTACGAGGAGA
GAGTGGTTGAAGAGACACGACAATTGCCTATGCAGAAAGAAGCATGAGGAAATAAACGTA
TAGAGAATGAATTTGTTATTATAGATATCAAAATCACATGATGTCATGTTTGAAAGACAC
TTTTAAATTAAAATAATTAATTAATAACAATGTGTTTCCTTGCTCCGTGACAACGCACGG
GCAGTAAACTAGTCTCAATAAAATCAGGATTAGGGACGAAATTAAAGATCACTTGTCCGT
TTCTTTGTATATAGGTATTAAATCTACATGCAAGCCTATTAAAATAGAAGACGTGTGAAA
TCTTGAACTACGTTTTTATAGGCTAAAATCATCTTTGTTTGGGTTGTAGCTACAAGTATT
CAAATTATAGATCACTTTTTATAAATTAAAAATATGTGATATTTTTTTCCATGACAATGC
ACGGCCTTTTGCTAGTTCGTACTAATAAAAAATCGTTCATCAGCTCCCACAGCAGGCGAC
CTGCTGTCAGTCTCAGCACCCGCCGCCTGAACATAGTTCTCTGTTTTTCTCCTCCAAAGC
AGGGCAAGCAGCGCCGCCTCCATTGCATCAAGAAACCGAAAGATTCAGCACACTTCTATC
CCTCCTTACTACTCCCTTCGTCCCATAATAAAAGAGCGTTTTTAACAGTACACTGCGTTA
AAAACGCTCTTATATTATGGGACCGAGGAAGTACTATACTGTACACAATAGGATAACAAC
TACAAGAGCAACGGAGCATGCCAAGACTGCAATTGATTGCCCGGTTGCTTGCTTTAGGTC
ACAGTGCCAACAACACTTGCTACATCTATCTAAAAGTAGTACAACAAAACAAGACTCTTC
AGTCTTCACGCTTATAGCATGCCAGTGCCACAGAACCACACGCATCGCTCTCTAGCACTA
CCTAACACAGTCGTACTCTGTCAGGTTTTACTTGTAGTGTTCGGGGACTGCCAGGAAAGG
CTTGAATGTCAACAAGAGCCCAAGGACCTCTGTCAGGTTCAGCAGAAGGAACACCATCTG
ATCACCTGAACACACATGAGGAATTATGAGACGATATACAAAAGCGACACTAATACTCAA
TCCCCATGATAGAAATGCTAAATTCCACCTGGTTCAGTTCTAGATACGGAAAAAAACATT
GTTTTTTGTCTACAGTAATTTAGTGATTAACACAGCAACTTATACGTTAACCATTGAGAA
CTGAGAAGACTAGTAATGCTGCAATCGATATATTTCCTGGAACTGCAATTTTTTTTACCT
GGAAAGAACGCTGCGTGCTGGCGCTTCTGTGCCCACGAGAATCTGCAATCACAAAATGTT
TTCAACAATATGTTTATCCCTTCTTTTTTTTTGAAACATATTTATGGCTTATTAGAATTG
CTTCAGGGTTCTAGACTTATCTTCAGGTAACACGGCCATATGGGTTCACTACACTAGGAA
AGTGATAATAAGACTAGCATCAATATTAATGATTATGGATAATATTAATTTATTACTCTT
CTTCTTTATCTTTCCAACAAATAGGAGATTAAGAAAGCAAAACTACTTACAGGATACCTG
CCCCAGCTGGAGCAACAGACTTGAATAAGGACATTAATGTTGTGGCTATTCCATTTGCAG
CACCTCTTTGCCCTTGTGGCTGTCAAAATAAGATCCAACTCAAATGAGGAATTTGTTTAT
ACATTAGTGAATTGGAAAATACAGTTGTCTGTCAGAAAGATCTCGGGCAGTATTCCGGTG
AACTGAGATGAGTTGGTACGTACCACAGCATTGTTTTGTAGGAGAGAAGTGCCAGAAACT
CTAGTTATCTGATCAGCATCGCAGCGATGAGCATTCGTGAAAGAAAAATATTTGAATTAG
ACATGCACCAAAATACCAAGCGCGCATTCTTATCTATGATGATTTATTTGCACATGTAAG
TAAACATTTGCTACAAGTAAAGATGGCTTAAACCTTGGGAACTATATTTCTCGTAAAGTA
CTTACAGCAAGAACGCTTTTAATCATTGCTGCAATATAGAGAGCCAGACCAAGTCTTATT
CCTGACAAGTGTGTCATAAAGGGATAAGCAGCAATAATTGGTATAGACAGGGCCTGCAAT
GCTAATGGTCAATTTACAAAAATGGGAGACAGTGAATTATTAAGTAAACTGAAATTGACA
TAAAGAAAAAGAGTGGCATTAGTAACTCACAGATGCGATGCGGGTTGAGTTTACAGGTCC
TAGCGTATTATTGAGCCAACGATAAACAAAGATTTGGTATACAAGAAGACTGGCGCCTGC
AGTGTAACAGATTGCATGTTTACTGCTCAAACATAAATCACTAAGAGCTATGTAAAAATG
TTTGAAAAAATAAGAAATGGATAGGTTAAACTATGCTTACCTGCCACTGTAAGAACTTGT
CCGACATCCTTAGATGAAAAGCTAAGTCCACCATATTTTCTACCACTTACAGTCCACAGA
GAAAATATCTGATGTTGAATTGTAGCAAATAATGGTTAGAATTTTTTCACTTGCATGTAG
CAGATGAGGTTTGCATGATAAGTATGATTTTTTTTGGAACAATGGGTCAAGAATTAATAT
ATTATACTGCACCTAAATCTGCAGTATCATTTTGGAGAACTTCTATATATAGTGATTTAA
TCATACCATATATTTACCTCACTATACGCAGTGTCGTGAAGGGAGAAGACACAATATGTG
ATAATTGATGACATCAATGGCCAATTTTTCCATAAGCTCTTCTTAGGTGACTCTGTACTT
TCCTGAGATGTACCAGTTTCGGCCGTTTCAGCTCGCATTTCAATCTTGGTGTGTTTGTGT
AGTGTTTCCTGTTTAGTGCATCGATGTGAGTACATATAGCATTCAAACAAAACTCAATTG
ATATACATTTACAGTATCCATAGTTCAGGTTGTACGCACCGGAAGCCATATGCAGCTTAT
GAGGGCTAAGGTTGCGAAAATTGATATGCAAAGACATGGAAGAAGATAGGGGAACCTGCA
TGATTGGGATCACGGACATGAAGATGGGCAAATATTTATGTCATTTAGTATGAACAATTC
AATGATAGGATAAAAGAGTACCTCCCAAATGTTGACTTGTCATGGAAAATGTGTGGATAT
TGTTTGGCTGGCTGGTATAAGAAGACAAAAATGGTCAAATGAAAATCAAAGTGAATATGA
TTGACACCTGTGATATTACCTGAGCAAGGTAACCCCCAATTGCTGGGCCAATTATAAGGC
CTACTCCCCATGCTGTATTAACCTAGATTTTTATGAAAGATCGAATTGAGTTCATGATAT
GTTTCAATATTATTATGGACTATGCATATTAGTTAAGTGTTTTATGTGGAATTGAATTTA
CAATTGATATGCCCAAAGCTTGTTCGTCATCCCGGCAAACTTCAATGGAGTAAGCCTGCA
TCCCATGTAACCATAGCATTATCGAAATAGACATTTCACATGATTAACAAAAATAGATGT
TGATCATTCCTGCAACTGTCCCTCAAGTTCAGTTTTTTAAAATACCTTGATTGGTGCTAG
AAATCCGTTTAGTGCACCAAGAAGCAACCTTGTAGTAATAGCCATCCAGTACTTCACACT
TAATCCAAATAAAGTGTTGAACACAACGCTGAAAAACGCACGAGGAAATTAGCGTACATT
TTTTCTTTCGAAATGAAATTTAAATGCCGCGGTAAATTTTCATCCGTTTGGAGGGAAAGA
TACTACAAATACTTACACCGTGAAAAGTGAAAATACAATTACAGGCTTTCGCCCGATGCG
ATCTGCAACCATGCCCCAAAAGATTGATGCGAAACCTCTACCCACCATATACGATGCACC
TACAGGAGAAATGTCACTGATAAGTACTGAATATTGACATTATTCTGAAACAAAGTATGC
ACGAATTTCGTTTCTCGTATGTACAAAATTAAATGGTACATTTGTGAAACAAAGACGTGT
GCATCAACCTTGTTGGTACAAAATGACAGTTATGTAGTACAAAAAATCTTACCAAGAAAT
CCAGCATAGAATCCAATATCTTCTTCTCTTTGAGCAACGTGCAAGTCTTGTATCTGATTT
AGAGAAGGGAAAAACCTGAGTGCTCACCTTTTTTTATTTTGCAAAATATATATAGAACTC
TTATGAAAAATCTAGACCATAGGGGTGCACAAGAAAAAGAGTTTCCTGCCTACCGTTGGG
TGGCCGATGATCACTAGAATACGGGCGGTCGCTCTCCTTTATATATGCCATTGGATTTTT
CATGTACTATGTGCTTTTCAATTTTTGACACTTCATTTGTGTCGCTAAGAGCATTTACAG
TCGGATTTAACAAATCCGACCTGATTCTTCTCTAGGACGAGGGTGCATGTGTGTTCCTCC
GCTACCTTTTTTTAATATGCTAACACGGGTGGCTTCCTCTCCTATGCGGCAGCGTGCACT
GCCGGATCCGCCATTGCCATGTCGGCAGCTAGGCACGCCTAGGCCACACTCATCCCATCC
TTCCCGCAGCGTGCACAAAGATCCCGATGTCACTCATACTCCGGCGGACCGGTGATGGGG
GGAGGGAGACTGGAAGGCTTCTGGAAGGACCAAAATGATCCAACCCCGATGATCCGAGCC
CCCAATGCACCAACGCGATGGACTCACGTCGGAGAAATCACGCCATCGGTTGGGCGTAGC
GGAGTGCAATGCATATGATCATTGCCTCCTCCAACCCTCACATGACGACACCCAATCGAC
AGATTCAGACTGGTCGGAGTGAGATCCGTTGCCAACCATGACGAAAAGGCCGGAGATCGC
CACATGAGAGCTTGGGTGGCTAAGTGCAATGGCTAGGGTTTTATCGAGGGAGTGGATGGG
GATGAATATATGAGGGGTTGGGTTGGCCAGCGTGGGTCGGGTCCGACGTGACGGACGCAC
CCGACGAGAGCTTGGATGCACCTTACATTTGAATTGGATACGAGGGGTGACGTTTGAGAC
CGGTTTAAGGCGTCCGTCTAAGTCGTTTTTCTATCGTCAGTGCCGGACCGTCGTCCCTGA
TGTATGAGGAAGGTTTGAGGTGTCCGACAATAAATGCTCTAACATGTAGATTCAAAAAGT
AAAAACATGACAAAATCAGTTTTTTTTAGAAAATGAGATATACCCCAGGCCTCTACATCC
CGGTGATGCATGCAACCATTTTATTAATTATTCACAAGGACCTTACAAAGTAATACATAG
GTAAGCCTGAAGCCTACATCTTGACAATATGTGTCGCTACTCCTATCCCCTTGATGAAGG
GGTGTCGAATGTTCGAGCCGAATACCAAATAGAGATCACACAGAAACCTAACATCTAAAG
CCGAATACGTCATCCAAGCCACAATGCCAGGACTGGGTCACACATCAGTCTGACGCACTC
TCAGTGGGCACCACATGTGCACACTGCAAGGGCCGTCACCACCATCTTCTATCGATCCAT
CTTTAGAGAAAATACTGACGCATCTGCCTTGCCAGGCCTCCCTGACATCGACACCAAACA
ACATCGTCCTCCTGCGCGAGTCCATCGCCGCACATCAAACGGCGAGTCTCCACTGCACCA
TGCCGCCAAGATCCGCCGCCATCAATGCGTAGGATGAAGCACCGCTCCACCAAAGACGTC
GTCCACTGGTCCCTCGAGCCTGTGTACACCTCCAAGAATGACGTCCCCAAGGGGGAAAGG
ACACAATAGCGTCATCGTCATTCGATCTACTGATCTAGGGTTTCCCCCAGAGATAGTAGA
CAGCGGTCTAGAACTTCTCAACGACGATGCCTTCAAGCAGAGAACGACACCGAAGAGTGC
CACCATCGCCGGCCTTGGCAGCTAGCTGAGAACAGGTTTTCACCCAGATCAATTCGAAGA
ACCTACATCAAGCATCTTGTGCATGGATCGCCGCCTTCTCTGACGGGGACTAGACGGGAG
GGTCCAGCCGCCGCCGCCTAACCGACAACGGAACCACCACGGTGCCTAAGCAACCGGCGT
GATCAGGCCCACTGCGCTAGCCCGTCGCCGCGGAATCGAGTTGTCGTCCCGCCCAAGCCC
ATCTAGGTCGGGCGAGATCCGCGAACCCGGCCGCCACCACAGGAGCACCTCCAACGAGGG
GTGACTGCGCCTTCGCTGTCGTCGCCGCGACTCACACCGTTGGGATCCCGCCGGTCCTCG
CTCGCCGTGATATGTGTCTTCGTCGCCGCGCGAGGGAGACTACCCCATCGCCGCCATTAT
AGCTCACAGAACAGGCTTCGCCCATCGTGATTTCTGGTGGCGGCGGGAGGGAGGGATGAG
GAGAGGAGGCCGAGGGCTGGCGACGTGATCCCCCTATGTCGCAAAGGTTGGCGACGCGGG
GTCATGTATCTTTTTGTTCATGACAAAAACAGATGGAAATAGCTTACTAGCAAAAAGGTA
AATTCTCACATAGTGACAAGCTATTGACCAACCGGACATGTCCGGCCGACTAGCAGTACT
GAATACTCCCTCCGTCTCAAAAATTTTGTCTTTAATTTGTCTAGATATGAATGTATCTAG
TCACATTTTAGTATTTTGGTACATCCATTTTTAGACAAATTTTTTTGGGACGGAGGAAGT
ACTCCAGTATATAGTGATAGCCAGTCGAGACTATCATGTAATCTCCTTTTTTTAGTTTTT
TGAAAAGAAGTTAGGTGGATTATTATGTAGTAATAATAGTCTTAAAAGAAACACCCAGCC
AAAATGAAGACTGAAATCTACTTCTTCCGTCTCATAATATAAAAGAGGTTTTGACATTAC
ATTAGTGTCCAAAACTTTCTTATATTATGAATTTATGAGAGCGAAGGGAGTAGCTAGCTA
TGAAGAAAATTGGCATGGGTACGTGAAGACAAACTCACCATGAAGTAGAGAAACGGGAAC
AACGACGTGATCGGCAAAGCTGAAAAGAGATGGATGGACAGACAGAGAAGAATCAGTTAT
GGTGGGAATCCAACCGAGTTACGTTATTAATAATATAATAGTAAAATAAATTGCATATGT
ACTCCAAGAATGATAGTACTGCTACTAGTAAGAAGCATCATTAAGAAATGAATTAAGAAG
GGATGCAAGCGTACGTGCAGTGGGGCTATAAGATAAGACCGAGAGAAGGGATGAATTAAC
AAGTACTCCGGCTCGCAGGAGCAGGACAAGAGCAAGATCGACCATGCCAACAATTTACTA
CTTATATAATTCTATTAGTTTTATTATTAGTAAGTAGGAATAGGATATATAGATATACTA
ACATGATGCAAAGGTGATGATCCCGACGAAGAAGAGCTCCTTGTACGGGGTCCCCTTGGT
GCTCTCCTTCCTCCGCTCCATGGCGCACCCGGGGCACCCGTCGTAGTACACCTTGGCTAC
AGCCGCCGGCGCTGGTGACGGCGACTCTCCCATCCTTCTCGGCTAGACGATCGACCACGA
CGACGAGGGCGACGCTGAGATGATGGCTGGCTGGCGGAACGGGACGGTGCGGCAGGCTGA
GACGGAGAAGGATTAGCAGAGCCTGAGAAAGGCGGGGAGGAGGCGTCCGGCCGGCCGGGG
CAGAAGAGGAAGCAGGAGTTGAGTGGGGGCGAGTTGAAGAAGCTTGTCGTGTGGATCGTG
TCTTGGTACGTGTGCCCCGTTGGCAGCAGACGGCGAGGGACACGTCAGGACACCAGCGCA
CCAGATCGATCACGATCGGTCGAGACAAATCCAGCTTACAGCGGGAGCCTGGCGTACGTA
GTTACGGCGGGGCACTGAAGCTGGCAAGCCAACGGAGGGGGGAGAAGGGAAGGACGGAGG
CCCAGCGCGGCGGCTGGGAATTTTATAAAGAGAGGGGGGGGGGGGGGGG