Map Locations of contig_51741 (5792 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_51741

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66548 1 1323 bp AK251104.1 Available Available None





CDS Structure of MLOC_66548






Contig Sequence (5792 bp)

>contig_51741 5792 assembly3_WGSMorex_rbca.fasta
ACAATAATCTATGCGGCATTTCTTAGCTAGATTTCTTAGAAGGATTTCGGGCTATTTTGC
TCATATTTTAGAAAACTGATCATGTGTGATGGCCCATCTGTCTTGCAAAATAGACTTGAA
CTGGTCACGTCAGTTCCAATCTGCATATCTTTTCGGTGCTCCTACAATGTGCTAGACAGT
TTAATTCTTAATAGTTTTTGACTGTATCACATAATGTAACACCTGGCACCTCACCCCGTG
TGGCTTAACAGAAAAACCAGAACAACGCACGGTGTAATTTTTTCAGTAATCATTTTGGGT
AGTAGAGTAGTATTTTAGGGTATGTTTGGTCTGAGCCTGAGCATACCCTCATCAAAATTT
TGGTTAGCCAAAACTTTTGCCAAGGTTTTGCACTTTTGCTTGCCCATGTTGGCTAGAAAA
ATGCATGAATGGCCAAATAGACCTGGGCATCGCCAAACTTTGGCAACCTTCTGAACATGA
ACCAGGCATACCCTTAATTCTGTGTAGATGTGTATTGCATTTTGGTGTGCATATTTTCTT
ACTATTCGAACATTGATTTTTTCTTGTATGTTTTTACAGAATCCTCCAGCATCCATAGCA
GAAGGCACCCAGCTATCTAGAGACACTGATCTATCACCCGGGCAGCCTATGCAACCTGGC
ATGCCATCATCTGGTGTTGGTGTTATTGGCCGGAGGAGTGTATCTGATTTTGGAGCAATT
GGAGACAATCTCAGTGGAGCTTCCGTAGTTTCTGGTCACGATCACCTTTATAATTTGCAA
ATGCTCGAAGCTGCATACCACAGGCTTCCACAGCCTAAGGACTCTGAGCGTGCGAAAACT
TATATTCCGGTATGGATGCTGTCATTTATATAGGCACCAGATGTTGTTATGCAGAGTTGT
AAACCTAACCTCCCTATCTCATCCCTTTTTCAGAGGCACCCTTCAGTGACCCCTGCCAGT
TACCCACAGATTCAGGCACCAATTGTGACAAATCCTGCCTTTTGGGAAAGGCTCGGTAGC
GATACATTATCTACAGATATGCTATTCTTTGCATTCTACTATCAGCAGGTCAGGCTTCGT
ATACGTGTTTCCAAATTCCAAGTGTCTACTTTCGTTTTCCTTGCAGCACCATCCATCCAG
CTTTAATAAAGCTCTTGACATTATTTATTTTTTGCACTTCGGCAGAACTCGTACCAACAA
TATTTGGCCGCTAAAGAACTAAAAAAGCAGTCATGGAGATTTCACAGGAAGTACAATACT
TGGTTCCAACGGCATGTGGAGCCACAGGTCACGACGGATGAGTATGAGCGGGGATCGTAC
GTGTACTTTGATTTTCATCTTGCAGATGATGGAAATGGGTGGTAAGTTGACCCCTCTTTT
AGTCTTTTTATCAAGTGGATTGATGACGTCCGTACTGGTACTGCTTATGGTGGTGAGTGT
TGGTTGCTAACCCGGTTATATATTACTGCCCGCTCGCTCGCAGGTGCCAAAGGATCAAGA
ACGACTTCACATTTGAATACAACTTCCTTGAGGATGAACTGTCAGTACAACCAAACTAGG
GCACTAGGGCTGAGAAAAATGTTTGCTCAATTGCGACTCGTGTAATTTTCAGAATGGAAC
TGTTGGAATCTGGAACAAATTCCCCAGTTGTAAGTTGTAACCTTGTGGGTGAATTTAAAT
TTAGAGCTGTTGTGTGCATTACTGGTCCTAGCCCTCAGTCTGAACCTTAAGCTGAACTAG
ATCCAGAAGCCCTCAGTCTGAACCTTAAGCTGAATTAGATCCAGATTTCCTAGAAACTGG
GAACTGGGCATGCCCCATGAATTTGATGATACATTCAAATAAATGGACTTGATGCAACAT
TGAAATAAAGTGAATAATCTAAAATCTATGCGGTCAAGATGGCAGAGGATTATCATCACT
TGTTCACACAAAATGAATGATTGAAGCTAAGAAATTAATACTGCTTCACTTCAGTTTTTT
TTTTTTTTTTTTGGATTTAAAAAGCATCGTCTTCACTTGTAATGCTGGCTGCATCTTCTT
CACAAACCAGATGGATGATGTGCCATGTTTCAATTCAGAATTGAGCCTAAATGACCAACA
AACACAATCTCTCCGGCTAGACACTTGAATGACTCTACACAAAACTGTGGGTTATGTTCC
AGGGTTTAAATCATCTAGTAGTACCAATATTAATATTTTTTTTTTTCTGATCTCCTTGCT
AGCCCTATAGATGGATTATGGTCACTGGTCTGTAAGCATAAAAGGGGCAAGCACCCCAAG
ACTAGGGTTGTTCAATGAATGCTCTCTTGTGGATTGTTAAGAGGGATTTCTGTGTAAGCA
TAAATGGGGCAAGCACCCCAATATGAGGGTTATTCAATGAATGCTCTCTTCTCGAATGTT
AGATGGATTTCTGCCCCAGAGAGGAAACCCCTGATCACTCATACTCCCTCTGTAAACTTT
TATAAAAGCGTTTAGGAACTACAGCTCAAATTCGGTCACACTACGAAAATCTCGTCGTTT
CCCATTTTGCCCCTCCCTCACCTCACTCACTCGCGATTCCCTCACTCCAAAATCCCTAGC
TTGCCGGCGCCGCTCTCCCTCGCTCGCGCCGCTTCTCCCTTTCGCCCGCGTCGCTTGCGC
CACCTTCTCCTGCTCGAGGCAAAGCTGTTTTTTTTACTGAGGTCGAGGAGGAGCGAGACG
AGCGCGGGCCAGACAGCCTTGTCCTGCTCGACTACGACGACGAGGAATGCTGGTGCTCCT
CGTCTTCCTCGTTCTGCAAGGAGGAGCGCCGATACTGGAGATGTGGAGGAGCGGAGGAGG
TCCTGCAGATGGGCCTGCACGGCGAGGAGCGCAGGAGGTCCTGCAGATGTGGAGTTCAAG
CTGCTCCGTCGGACGAGGGGGTGTTTGAGCTGCTCTGCCGGACGAGGGGGTGTTTTGTTG
TTGCTGATGTCGACTAGCCATCATATTGTTGCTGCATATATGGAGGGAGTAGTAGATGTA
TACACAAGGTGAAATTTTAGGAATATGGAGGGAGTATACACATTGTTCAAACTTTAGGAA
TAAAATCCTGCATACAAGAGCAGAGAGACATCATTTTTGTCTTGCAAGCATACACAAACT
TTCATGTAAAATTCAGAAACTTCCATAAAGTTCAGAAACTTGCATATAATTTCAGACAAC
ACATATGGAATACTCCATTTCAAACAACACAATATAATCCATTTCATACTTACAAATAAT
CCATATCCACAAACAATACAAGACTCAAGAATGCATTTCCACAAACAAGTTCCATCATAG
CACTACAAGTCTCAACATACTCCATTACTCCATGACATCTTGTTCTAGCATCTCCATGGC
ATATTCATACACTTCATGAGGAAAATGGATCCGAGGCGGTAGGATTCCTTGCCTTTCCAA
TCTCTCCTTCCGGAAATGTGGAGTTTTATATGAATTTTCTCCTCCATGGTTCATCACTTC
GACCATGATGGTCTGAAGTGTTACAAATATTCTATTGAGTTTTCCGACATCATACTCATC
AAATTCTTTGTGCACACCTTGAATCAGTTCTTTGATAGTCGTGGGAGCAGTCTGTCAAAC
ACTGAAGGGATCTCAAATATCCAAGATCAAGTGTGTTTAGATGAGGAGAATTTGGAGGCG
CTTTTATTATTTTAATGTCCACACCAGTTGTAGCCACAACTTCTGCAAACTCTGTATCAT
AAGGAAGAATGTGGGTTTTCGCATTGTCTTGCTCGATGAATATTGGATTAATATCATCTA
GGGACCACACTTCCTTTATTCCTGGAACCACTTTTTCTATCATATACCCCCTCTTTACCC
CACGACACATATTTAATCAAAGCAAGTGTGAAAAAGGGCCTCAATCCCAAGGCACCACCA
CCCTCTCCCTCTCCCTCTTCCACATCAGGGCATGGGGAAGGCGAACCTGCTGCTGCATGC
TGCAGGAAGGGACTAGACCGCTCCTAGCTGCTGCATGCTGCAGGAAGGGACTAGATCGCT
GCCAGCATGCTACATGCTATAAGAAGGGACTAGACCGTGCCAGCTGATGCATGCTGCACG
AAGGGACTAGACCACCGCCAGCATGTTGCATACTGCAGGAAGGGGCTAGACCGTTCCAAC
TGCTGCTGCTACTAGCATGCTAGATGATGTAGGAAGGGACTAGACCGCTGTCAGCAGCTG
CATGCTGCAGGAAGGGACTAGATCGCTGCCAGCTGCTGCCTGCAAGATACGAGTTATTAT
ACTATATGCATGCAAAGCAAGATATGATATGCATGCAAAGGAAGATATGATACGCATGAC
ATGCTGCAGGAAGGGCCTAGACCGCTGCGAGCTGCTGCATGCTCCACGAAGGGACTAGAC
CGTTGCCAGCTACTGGATGCAAGAGACAAATTATTATACTATATGCATGCAAAGGAAGAT
ATGATATGCATGCAAAGAAAGATATGATATGCATGGCATGCTGAGACTAGACCGATGCTA
GCATGTTGCATGATGCAGGAAGGGACTAGACCGCTGCGAGCTACTGCATGCAAAAGACAA
GTTATTATACTATATGCATGCAAATGAAGATATGATATGCATCCAAAGGAAGATATGATA
CACATGGCATGCTGCAGGAATGGACTAGACCGGTGCGAGCTACTCCATGCTGCATGTATG
GCTGCAAGAAAAGCTCAAGGCTCGTGAGCAATTTGAGATCGACTCGTTTTTTTTGCTCGA
CTCGAGATCAACTCGACAAGAAATGAGCCGAGGTTAAATACTTTATGTAGCTTTACCAAG
AAACGAGTTGATCTCGAGTTAATATTCCCTCGCTCGATTTTAGCTCGATAGCTCGACATA
ATATCATTATATGTTAAATGATCATGTCATACATTAATTGGAAATAAGTTATTTTTTCAC
CATATATGCGGACTGCAATTTTTGTCCATTTTATTTATCAATAAACATTGAAGTTTAATT
AAGCGCGGAGAAAATTTTGGCCTAATTATGGTACGTGGTGAATGTGTTAAATGGTATGTG
GTCAAATGTGTTAAATATCCTAGTATTATTCAACCATATGCTTGTTTTTTGTCCACAAAG
ACCAGTGTCTATTGCTAGTTCGCCCAAGAGAACAAGATGAGATCTTCCGGGCACGACTAG
ATGGCCATACTTTCAATTGAAATAAGCAATTGTTTCCACTTTCAAGTCATCTAATTGGTA
CTATAGTTTATAAAGATACGAGTGATCTCTGAATATGTTGGTTGTTCCATTTTCTAGATG
CAAGTTATAGTTAGATTGATCACGTGTTGTGCCTTATCTACTTGGAATAATCGTCATGGA
ATTATATATATATTACCGTTTAGCCCGACACTAGCTCGCGGTTGACTCGAGTTCGTTACA
AGTTGAGCACAAGCCATGTTCCACAGCTCGATCTTGAGCATCACTCACTTTGAGATCGCG
TGGATTTTAATATGAGTTGAACTGAGCCAACTCCAACTCGCTCGAATTCGACTCGTTTGC
AGCCCTAGCTGCAGGAAGGGACTAGACCGCTGTTAGCTGCTGCATGCAAGAGACAAGTTA
TTATAATATATGCATGCAAAGGAAGATACGATATGCATGCAAGGGAAGATATGATACGAA
TGGCATGCTGCAGGAAGGGACTAGACCGCTGGAAGCTGTTGCATGCTGCAGGAAGGGACT
AGACTATTGCGAGCACGCTGCATGCTGCAAGAAGGGAGTAGATCGCTGCGAGCTAGTGCA
TACAACAGACAAATTATTATACTATATGCATG