| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_51680
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_66512 |
1 |
764 bp |
AK356012 |
Not available |
Available |
None |
CDS Structure of MLOC_66512
Contig Sequence (5105 bp)
>contig_51680 5105 assembly3_WGSMorex_rbca.fasta
AGTTAAAGTGTTTTGAGTCCCACGCCATATTTAATTCATAGAGTTTAGAGAAAGAAGATG
AGTGGCTATGCATGCATCGTTTTTTACATACATCATGCAAGTCCAATGAGAAGGAGGATG
CTACATTTATTGNNNNGGAAATTGAATATGTGAGAAATATTGTATTGACTAGTTAAAACT
AGTGTCATCCACTCACAATTTACCTTGATTGATGAGATTTCAGATTTGAGCCCTATAAAC
CGAAAAAGAGAGTATTTTAGAAGCCAATAACAGAGCTAGCCCTTAGAGTCACCCCCGACC
TAGTAGTTTGTGCAAGCTGAAATGTTGCTGCCTTTTCTTCTGGCGCCTCCTAAAAAACAA
GTAACTCTCGAGTATGCTAAAAATAAAACACTCAGCTACTGGATAATTTTAATTTGGTGT
ATCTAGGCATCCGTTTGGGCCAGAGTTAATATAAGACTAGGGGGTTCTATAAATTTGAAA
ATGCACTACTACATCTACCCAGAATTGTAAGGCCGGCAAGGGTTCTTAGTTCATTAATTT
GACTAGAAATTACACACCTTTTTCTTTAAGAATTTGAAGACCTGAAATCATGTACCAGTC
TTACAAATCCCTATATAGTGAATCCTTTTCTTTTGCAAAACACTACAATTTTGATTTGAT
AAAGTGAGCCCGCCTCCTCTAAGTAGCCTCTTCTGTTGTCTTGAATTTTTTTTAAGCTGG
TCATGCTAATATATAGTAAATTTTTGAGAATACACTACTCAAAAAAGATAAAAACCAGGG
AGACCAACCAAAACTAGCCCGGGCGGTTGCAAGAGTGGTCCAAAAAGATGCACGCAGAGG
AGAAAAGGTTAAATAAGAGTGACCGACCGTGCTCACAACAATGCAAGAGCCAGCCAGGCC
GCTTGACTTGTGACAGAGAGAAGAAAAAGAAACTTGGAGCAAGAACAGGACACTTGACTG
GCGCAGAGGAGGCGTCTACAGTCTACTGCCGGACAAACTAAGGCAACAGACGTCAGAAAA
CATCCATGTGCACCTAAAATTGCCTTGCATCAAATCCGCTTGGTGTCCTGTGACAGTAAC
ATCCAAGAGAGTGCCGAATCTCCAAGCTACCCGTTTTATCCGCCTATAGCTAGATCGCCC
AAACAACCTACGCGGCGATTTCCGTGCGCAAGCCGTGTCAGTGACTGACTTAAAAACCCT
ACCACAACAATTAGCTAGCAGCATAGCACCAGCAACAATCTAACTGCAATGCCTATGTAC
ATATCGATACGGCGAAACGAAAACCAGTGCCTGTTCCGTTTGTTTTACCGCGCGGGCGGC
CCGTACGTACGTGACAGGATAACCACACTGCACTTGGCTCAGCTAAAGCTAAGCTAGTTT
TGTCACGCGCCCTGCTCCTGAGGACGCGCGCGCGTCACATGCCGCCCACCGGCGCGGCCA
CGGCGGCCGGGCGCGCCTTTACGCACTTGCAGAGCAGGTCGCGCCGCTCGCCATGGTCCC
TGCATGCGACGGTTGGGAGTTTTGCAACGCCGGGTACGCGATCGCGACCCTTTTTACTGT
CCCGGTGCGCTGCTCGGCGCAAACCTACTGTCCTTTTCGCGTGAACGGAGACACCTTTTT
CCGAGAAAGAAGATGATGATGGCGTTGCGGGAGGGGTTTTGGCACTCGTACGTACCAGCT
GCACGGCGTCTCGGGCGGCGAGGGCGAGGATGTCGGCGCAGCTGACGACGCCGGGGCACT
TGCTCTCCACGGCGGCCTTGGCCATCTCCACCGTTTCGAACCCGTACTGCGGCAGGTTCC
TGTTCTCCTCCATGTCCCTCTCCACCTTCTCGCCTGCCGCCTTGCCTGCCGGCGCGATCA
GTATGGACGCGTCGCAGCCCTGTGGCGTTCGTCGTCAGCGTCAAATCCCAAGTTTGATCA
GACTCTGATAGGTACCAACAAATGCGCGCATACAATACTTGCTGCATGAACGTGCTAAAA
TGCGCCACGAAAAAGAAGGGAAAAAAAATCCTTCGATTGTTCATCACAAAGATGCCAGAA
ATTCACGGGATGGCATTCGTGTGAGGGAATTGCGCAATGTGTGTATGCAAATGCGTTGGA
GCTTTGCTTACGCACTTCCACGAAGCAGTCGTGGTGGAAGAGGCGGAGCACGGCGGGCCC
GGCAGCCGGGTGGTCGCGGAACCGCTCGGTGGTCACGTTGGCGACGATGTGGTCGACCGC
AGGGCACGTCTTGCCGTAGAAGTCCAGCGACAGCCCGTGCCGCTCCGGCGCCCGCCTGTT
GGCAACTCCCGCGGTCCTGGCACTGGCAGACGGCAACGGCAGCGGCGCCTCCCGAGCGCG
CGTGCCGCCGAGGTACGCGACGAGCAGCAAGACAAGGCTGCGGAAGCGGATGCCTCCGGA
GGAACCCATTGTCATGGAAGAAGAAGAAGAAGGGGAGTGGAGTGGAGACGACCGGAAGAG
CGGCTAGCTTGGCTTATCTCCTAGTCTCTAGCGCTGGCGCGGCTGGCATGGCGAGGGAGA
AAGGAGGGAGTTGTTTGTATTGCAGGTAATCCGGACAAACAGTGGAGAGGCCGATCGAGC
GCATGTGTTGGCTAAGTTGGACGAACGCGAGCTACTGCTCACCCGTGAAGAGAGAGGAGG
TACGTACGTTGAGCACGCCAGAGTTTTTTCTTTCCTTTTTCTAATGGCCATGACACAGTG
CACTCACAACATTTATAATCGGATCCTTAAACCCTCCATGAACGTCTCGACAGACCATCT
GGTCATTGTTCGATCACGAAAATGCGACACACACGTTCGGGCTGACCGGAATTCTCCATA
TCCAGCCCAAATATGGGACGGATATGGAGAAGCTCGGACGCGTCCGGGCACGTCCGCGTA
GCCCGCATCGGCCCTTCATATGTTTGTCCTCATTCGTTGGCCGGACCAAACCCTAGCCAC
TTTTCTCCACTCTCTTCGACTCCCATTCACCACCCAAACTCACCTCCGACGATCTCCGAC
CTTCTCCGGCATGGCCTCAAGCGGATCCGGCTCCGACCAGCCCGGATCCATTGACTAGGG
ATCGTCCCGTACAGAGTGGAGGAGACAACGGTGTTTCACATCGCACTCTATCGCTCCCAT
GAGGACAGCGCCCGACCGACAACAGGGTATATCCGCCGCGACTCCGTAGCGCCCTCTCAA
AGGACGCTCGGTTCCTGTGGGGCGGGATCCCACCGGGAACGGGCTGCCCACCGTGGGAAG
TAGAGGATAAGGATCGCCGAGGCTTATCTCGCGGAGGAAATGACGGCGGCGAAGGCGGTT
GATGCGGCGGAGCTAGCGGACGCAGAGGGGGAAGCCATTTGCGCCAACATTTTGAAGAGA
CGACAGCGGCGGAACATGCACGCCCTCGCGTGTGAACAGAATCGGGCTGACCGTGAAATG
GTCGGACTGCCATCGAAGGAGGAGAAGGAGGTGAGCAGTGGCGAGGACGACTCCGGCGAC
GAGCACATCTGGCTCGTTCCGTACCGCGTCTTCGACCGGTTCTTCCATGACAAGGACGTC
AAGGGCGCTCGAAAGGACAAGGGAAGCCGTGGATGATTTCCACCATAGCCACATATGCCA
AATTTTGGTATTCTGATGGTATGTTAGTAGTGATGGAGTAGCCGGACGACGTGTGTAATG
CGTCGATGTAGTAGTTACATGGGTTATATGTATTTGAGATATGAGATTTGAGGTGTCTCG
ATGTAAAATCGATTATTTGAGGCGTGGTCGGTGTGTGTCCGCGGACGCATCCGGACGTGC
CAGTGGACATTTGAGGGACCGGATTTGAGGGTCAAGCTCTAGGTGCTCTTAGAGCATCTC
TAGCAGACCCCGTATAATGCTCCGACCCGCAAAATAACCGTCAAAATGCGGGTTGGCGCG
AAAAATGGTGGCTGACCAGACCTCGCAAAATGTCCGACCCGTAAATATTTTTGCGGGGCG
CGACAAAATCCCATCCCCAACCCGCGTAAACATAGGTTTGCGCCTTGCCCCTACGACGCC
CATATCCCGGGAAAGCGATTGGCCGGAGGGACATTTCAGCCCGCGCCCTTTCCCCATCCC
CTTTCGCCGCCGCCCGTCCGCCGTCGGCGATTCCGGCCAAATCTGTGATAGGAATTGCAC
CGCGGGGGCGCCCCTACCCACTTCCACCGAGTCGATCCACCGCCGGAGAGTCACTGCCGG
AGAGCAACCGCCCCCGAGCAGCCGATGAGTTTTTACTTGTGCTTGTGCCGAGCGGTATGC
ATAGTTGGTTGATCCGGTGCACGTATTCGTGAATTTAGAGGAATTAAGCCCGTGCGAGAA
GTTTTTTCTCGACGATTTGTCCGGTTCGGACGACTCGGATGTTGAGACACTGCTTGTCAA
CTATCGCTAGCAGACGTTCGTGATGGCCCTTGCCGTGAAGGAGCACGAAGACGAGAACCG
AAAGAGGTAGCGAGGATCGACCGTAGGTCGTCTTTGCATTCCTCGAAATCGCCATCTCGG
GAACGAGATGTTGATGCAAGAGTACTTCACAGACAATCCAACATATCCGCCGCACCTCTT
CCGGAGAAGGTACCGAATGCGCCGATCCCTTTTTGCAAAAATTGTTCAAGCTTGCTAGGC
CAATTGTCGGTATTTTACTCAAAGAAGAAATGTCGCGGGCTTGAATGAATTTAGTGCATA
TCAAAAAATCTCGGCAACTATGCGGGTAATTGCATACAACATTCTTGCTGACTATGCCAA
TGAGTAGCTTCACATTGGTGAAGATACTACAATTGAGTCAGTGCGTAGGTTTGTCAAAGT
GATCATCCGTGTCTTTGGTCCTGAATATCTTCGGGCACTCAACGAGGAAGACACAAAAAA
TTTGATGGCATCTAATGATAGAAGAGGTTGGACTAGCATGCTAGGAAACATAGATTGTAT
GCACTGGACTTGGAAAAATTGCCCAAAGGCATGGCAGGGAATGTATGTGGCAAGTCTTGT
GATGCAACAATTGTGCTAGAGGCCGTAGCATCCCAGGATTTATGGATTTGGCATTGCTTT
TTTGGTATGCCAGGTACTCTCAATGATATCAATGTGTTCCAACGGTCACATTTGTTTGCT
AGGCT
