| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_51674
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_66505 |
2 |
1965 bp |
MLOC_66505.1 |
Available |
Available |
LOC_Os12g41400.1, FRAME:+3, EVALUE:0.0, 13112.m04321 protein eukaryotic translation initiation factor 2 subunit gamma, putative, expressed |
| MLOC_66507 |
1 |
1529 bp |
None |
Available |
Available |
None |
| MLOC_66506 |
1 |
641 bp |
MLOC_66506.1 |
Available |
Available |
LOC_Os11g04350.1, FRAME:+1, EVALUE:3e-55, 13111.m00386 protein cell death associated protein, putative, expressed |
CDS Structure of MLOC_66505
CDS Structure of MLOC_66507
CDS Structure of MLOC_66506
Contig Sequence (10697 bp)
>contig_51674 10697 assembly3_WGSMorex_rbca.fasta
TAGCTAGTAGGAATCAACATCCGCTATAGTGTCAACTCTATCTTTTGTGAGAACATTAAA
CTGTTATATCTACTCAAGTTAAATCGGACAAGAAACATGTGTAATAGGCATTTTCGAAAT
AACCAATATAGAGAAGGTATTAATTAATATTGCACAATAAGCTTTATTGTAGAAAGTAAC
ATGCAAAATAATATCATATTTGAAATCTTCACTTTCTTTCAAGCGATTTTCATATATAAC
ATGTTAGATTTAGAGTTATGGTTTAAAAGATATGAATGTTTTAAAAGCATTTGAATTTAC
ACAAAAAAAATAAAGCAATAGGAAAAATAGGTCGGTGCTGGAGTCGAATCCAGGTCTCCT
CCTAGTGCAACAAGACATCGGTACGTCATCTACCGGGCTAGATCCGTGACTGTGCTGAAA
TAGAGGCGACACTTCATATATACCGAATTAAACGAACCATTTTTCGTTTTTTCACTTAAA
AAGGGAGTGCGGATTGAATACACAAAACGCCAGGGGCTTTTTTTGCAAAACCGCTACGAC
GGATGACAGAGTCATCAGTGCTTTATTATTAGGAAGAGATAGGATATGTTATTTATTGTC
ATGAATGACACATAGTAGCACAACATTTAATATGTTACGGTATCATAATATGATACCCAA
TCCTCTTTTTCTTCATTTAATTCTGTGCCACCTCATCAAAATGAATTATTTGACATACAT
GATACTACCTATGATACTACCATTACGACCAACCTTAATAAGCAGCCTCCGTGTTAAGGA
AATAAAACTCCCAAGTTCTCGGCACAAAAAAAAAGAGTCACGATGGGCCGGGCCTTCTTC
TCGTGAAATTTGACAGAAGAACGTATTTTCGTTTGGCTCGACAGAATAACGCACCCTTTT
ACACGACGCCAACCCCCGCAACCCTTAACCCTCTCTCCCCCTGCCGCCGCCTCCCTGCCG
CCGCGTCCTCGCTCTCGCAAGCACCACCGGCGACACCCCCGTCTCCGGCGACCGGCTTCC
TAGCGCCCTCCCCGCTCGCCCCCTCGGCCCGCAGCACATCCAGGCGCGCGGCGACCCTCC
TCGTCGCGGCAAGCACACCCAGCTCGACGGTCCCCCGACCCAAGGCGAGTCCCTCGTCCT
CCCCTAGATCCCGTCCCTCCTTGCACGCCGTCGCCGTTGGATACGGGACGCCGCTGATTA
CGTGTCTAAGGACAGACTGGAAGTGAAGTCCGCCTTCGAGTTTTCTTTAGGTTGGATGGC
GGTGAACTCGGTAGATTCTAGATTGTGGATGCCCTTTTTGGATCAGTGTCCTGCTGCAGT
TGCGCCAGCATATGATGTTCTCCTGCAACTGGTCTCTGGGTCAGTGATTAGGAGTTGGAG
ACACAGGGTGATGACACTGTTTCTGTTTGTACCATTTCTTTCTTTCAGTTTCAATCATGG
CGCGCCGAGGATTGATGGAGCAGGACCTAACCAAGCTTGATGTCACCAAGCTACACCCGT
TGTCGCCTGAAGTTATCTCGCGCCAAGCGACAATCAACATTGGTACCGATTCCGTCCTTC
TGGCAATGTTTTGATGTTCAGTAATTATCAGCATGGTGAATTTACAGGCGTTCGACAGTA
CAAAGCTATGTGGATTGTACCTTGTGCTCTCCGTATTTTGTATGATGTTATTCAGTGTGG
AATGTTTGCGGTTTGCCATTGTACAATCTCTGGTGATGCCTATTTTACATATATTCTTTT
CAGTGGAGTTTCATTTGCACGATGTTGCTTATTTTCTGTGGTGCGTAGATTGTTAGATGT
TGGAACCTGTTGCTTACTTTCGTATTTGTCTTTTCTTTGTATATGCAATTATGCACCTGT
TTAAGCCTTGACCATGATACTGAAGTCTCACATGTTGCTTTTCTGGCTGTGCTTAATCCT
TTTGCGACTGCATGGGGGACTCTATGAGTTCTTATTATGATAATGTGATGGGTCATGTAT
TGCCTTCAGTGATGACGGATTGACGTGTCACTTATTTAAGAATAATAAATAGACACCGTT
TTTGGAAAATGCATTCGGAACTCTTAAAGCCAGGGTGCTTTGATGGAGTAAACTTTCCTA
GTATAAATAGCGGATTTTATTTGCAGTTTTGATTTGTGAACCATCACTTGCTCTTTTTTT
TAATCTAGTATATTTTTTCCATGGTATTTGGGTCATATCCGAATGTTAGGTCACTTCGTG
TGGTGGCGTAATATTTGCGATCTTTATGTTACACCTCAGGTACAATTGGTCATGTGGCCC
ATGGAAAGTCTACTGTTGTGAAAGCTATATCTGGAGTTCAGGTATCATTCATTCTGTTGG
CCACATTTTCTTTCCATTCTGTGTACACCTGTTAAGTACTAAGTATTCATCACATTTATC
AGTAACTCTTATGAGTTTACCATATTACTCAAAATATGTCATGCGAATATTACTTTTGGT
ATATAAATGAGTAAACTACACCTAGGAATTCATTGATGAAAGTGTGGTCTGGGAATTCAT
TTAATATTACAATTAAAAAATACAAGTGCTTGATTATCTTGGCTCGAGTAATGGCACTGT
TCTAATTCATGCTTCTTTGCCATGGGTTTTTACTATAATTTCTAGAATTGTTACTAACTA
ATGAATGTCGATATGCTCATCCTGTTCCATACGGAATTTCCTTAGTATTATTATTGTCTG
ATCTCTGATGTCTTTGTTTTGATTTGTAGACTGTTCGCTTCAAGAATGAGCTTGAACGTA
ACATCACTATCAAGCTGGGCTATGCTAACGCAAAAATCTATAAATGCGAGGATGACAGAT
GTCCACGACCAATGTGTTACAAGTATGCTAAATTTCCTTTCTTTTTTAGTACATGATTAG
CTTCTATTACTGCCAACCTCTTTACAATTTAGTACATGATTAGCTTCTATTACTGTCAGC
CTCTTTACAATTTAGAGCAAAGAACAGTGCTCTAAATTGAACTCTTCTATGCTCCTACAA
ATCATTGGACCTGTATGTTCATATGATTATTTTCTAGTGAATACAAGGTAGAACTCAAAC
TCATGATTGAAATCTTAAATTTATCTCCAGAAATTAGTTAGCGTATGATTATTTACCAAA
GTTACTGATTTGGCTTTAAGCTCTTGTACACTATTTGACTTTTGTTCAATTATTATATTA
AGGGCGTATGGAAGCGGAAAAGAAGATACTCCTGCCTGTGATGTTCCTGGGTTTGAAAAC
ACTAGGATGAAGCTCCTGAGACATGTTTCCTTTGTTGATTGTCCGGTATGATAAAGCTCT
ACCCTTTTGCTATTATGAATGTTGTCTTCTACAGATCGAGCACATGAATGCTTAAGTACA
TAGCCTGACCATTTCTTGCCCTACCCAAGTGATTAGTAACATTTTTGCACCCTACAGTTT
TATTTTGATTTGTTTGCTGTCAATTATTGTCATGAGGCTTCTCTTGCATCACCATAGATG
ATAATGGATGTTACACTACATAGTTGTATCGCCAATTATTGAACTGAATTATTATATGAA
TTGGGAAGTCATCAGAGTTCTCTGATGGATCATTAGATATTCTTTTCATTAGTGGAACTT
GAATATGGTATTATGTAAATGTTATATATGTATTTACAGAATCTACCTTTTTGAGCAGGG
CCACGACATTCTCATGGCTACAATGCTTAACGGAGCAGCTATCATGGATGGAGCCTTGCT
TTTGATAGCAGCAAATGAAAGCTGCCCGCAACCCCAGACATCTGAGCATCTTGCAGCTGT
TGAAATCATGCGCCTCCAGCATCTCATAATTTTGCAGAATAAGATTGATCTTATCCAGGA
AAGTGCAGCAATGAACCAGCATGAAGCAATCCAAAAATTCATCCAGGTCACTACTGTTTG
TCATTGCTCGTGTTATAAATACATGTCTTCTCTTTCATGGTTTCATCTTTTTTACTACCA
TCTTTTTAGGGCACGATAGCGGAAGGTGCTCCTGTGGTGCCAATATCTGCCCAGCTGAAG
TACAACATTGATGTGATCTGTGAATATATTATTAAGAAAATCCCCATTCCGGAAAGGAAC
TTCACTTCACCTCCCAACATGATTGTTATTCGTTCCTTTGATGTCAACAAGCCCGGTTCA
GAGGTTGATGAAATTAGGGGTGGGGTAGCAGGTGGCAGCATCCTCAGGGTATGTATATAT
AAACTGAATTAGAGATCATGAGTGTTCTCGTTTTTCGTGTGGTAAATATGAACTGCGTAT
TGATATGTATATATAAACTGAATTAGAGATCATGAGTGTTCTTGTTTTTCGTGTGGTAAA
TATGAACTGCGTATTGATTCTTATTTACAGGGAGTCCTCAGGGTGAACCAGAACATTGAA
GTTCGCCCTGGCATTGTCATGAAGGATGAGAGTGGCAACATCAAGTGCACTCCAATCTAT
TCGAGGATTGTCTCGCTCTATGCTGAGCAGAATGAACTCCAATTTGCTGTGCCAGGAGGA
CTTATTGGTGTGGGAACAACCATGGATCCAACTTTGACTCGTGCCGACAGGCTGGTTGGC
CAGGTTCTAGGAGAAATCGGGTCGCTCCCTGACGTATTCGTGGAGCTTGAGGTTTGTCGA
ATCTTTGCTGCTTCATGATTTTAGCCAAACAGAGATATAGCTGTTTATGGCAATCCTTGG
GCATTGCTTTGCAGATCAACTTCTTCCTTCTCCGAAGGCTGCTGGGGGTGAGAACAAAGG
GTACAGAGAAGGCAGGGAAGGTCTCCAAGCTCACGAAGGGTGAGATCCTGATGCTTAACA
TCGGATCCATGTCCACCGGTGCCCGTGTGGTCGCCGTGAAGAACGATCTCGCCAAGCTCC
AGCTAACCGCGCCCGTCTGCACAAGCAAAGGCGAGAAGGTCGCGCTGAGTCGCCGTGTCG
AGAAGCATTGGCGCCTCATCGGATGGGGCCAGATCCAAGCCGGAGCGACCCTCGAAGTTC
CACCCTGCCCGCTCTGAAGAAAAAAAAAGGCGCACAGCTTGCGAAACAAGAGAGGCGAAA
TGTGGGAGGGCAGAGAGCTCCTAGGTACAGTTTTTGTGAGGTGGAGGAGAAAACATTATG
AGTCTGGAAGTCTTGTCGTCGCGGGATTTGTCTACGCTACTAGTTTGCCTTTCTCTTTGT
CTGAATTTAGGATTTGTTATACTTGCTGTGTTACCATGGCCGTGGTCAGTAGGCGAGGAA
CCTACTACTTTGGCTCAGGTTTACCCTCTTGCCTATTTTTCATTGACAACATTTGTCAGT
ATATCGCTTCTAATTTTACTCAGCTTATCTCTTGTTTGTTAGTCTGCAATGCTGTTCCTT
GCCAACAAGTTCTACATATTTCTCACAATGCCCCTAGAAACGTTCAAGGGCGTCAACGGA
TTTTGGTTCAATTTTTCAGGGAAAGAACAAGTTCCTATAGTTTACCAAAATAAATTTGCA
CTGCTAAATACAACCTTGAGAGGAGGAGGCTACATTGCCCATTTCATTGACTCCATTATG
TCTTGCCTTGAGCAGAGTTCAATTGCTCCTAATTTCTCCTCAGCTTGTGCGTTGTTTGAA
TCTTTTTTGACAACGACAACCATACTGTAAGCTTCCCAATTGTTGTGAAAAGAGAAACAC
AGTAAGCATAAATTTCTGGGCGATATGTTGCCCTTTGCCATTATCTGGCTGCCCTTTGCC
ATTATCTGGCCAGGTTACTCACGATGATTGTATCGCTTGATGCTACACTGAGTCAATAAA
ACACACCCTTTATCGAAAAAGATTAGTAAATGCATGATAAATGTTGTGCCACACTTTGTT
TGGGAAGAGTTAAATGGTTTGTCATGTATTCTTGTTTTGCGTTTGGTTGTGCCCTGGACT
TTTTTTCAACTATTCCGTAAGAATGATATCAAACTTCAAAATAAAGAAAAACTTATGTTA
AAAAACAGCTAAATGTACATTGTCATGCCGGCTGAATATAGCCATCATTACACTACCAAT
TCAGAAGAAGAAAATGTAGCTAAAAGGACAAACTATAGACTTGGCTGATGAAATGGAATA
TACCTTCTGGATGCATGAGTGTATAATGTAGCGTGTATAATTACTCTGTGGAGAACGTGG
AAGGAGCAACACTACCAGATTATGCTAGTCAATCGTGTGCACCAATCCCTTCTATCTGAC
GTTTCCCACATCTTAATAAATCACTCTTGGAAATCAATTTCAACACGGACGGCAGCAACC
AAAAGTATTTTGCCAGAACCAGGAAGTTAATTTACTTTCACATAAAGACAAGAGAGATAA
TGTCAATGACAAGACACATACTCCCTCCGTTTCAAAGTTAAGACGATTATTTTAGGACGA
AGAAAGTAATTAACAACTAAACTAGAGTACAATAAAAAGGAATACCCCTCGCCCCAGCAA
AAACATTATTTTGTAGTAACTAGCAAAAGAGCCCGTGCGTTGCAACGGAAGAAAAAACAA
CACGCATTTTTAATTCAATAACCACAACTCAAGATCTTAATAGGCCTACATCTTTTAATT
CCAAATGGCATCATATTTATGTCACCGACAGTGGCCTGAGTGCTCACACAACAAAAACAC
ATTTGAATATGGTCAGTCCTAAGGTCTCTCTTTGTCTCTCTCTCTCCGAGAAATTTTTAG
TACGTTCAGTATGCTTAGTTACAGAGGGAGTATACACCAACTCGATGCATATTTAATGAA
CAAATCAAGAAATAAAAGCCTGAAAGAATATTGAGTACATGTATTCCAAATAATTAAAAT
TTATGTCTTGTGAACTTATATTATTAATGAACATATAATAAGTAAATATGGATATGATCT
TACTTGATGTTTCAAGTTGCATGGTCTCTCCCCTTCTCGATGATGTCCACAAATATTTGC
ATTATGATGAAAATAGCAAAGTATGTTTTATTAATTAATGATAGCATATGCGTTAGAGTA
CTATTTTTGTCTTGCTGATATATTTGTTTGTATTTGTAATCCAAATGAAATCATAATTAG
GTAGTAATAACAACTAACTAACCCTTGAAAACTCTATATAAGGCTTCGTAATCAGTAGTT
ATCATCCCATCAAGTGACACAACCAACATAGTTCAAACACAAGCACACGTACCAAAAAGC
CACTAGAGAGAATGGCAAACACTACCCGCCGCAAGAAACTGGTGGAGGACATCGGGGGTT
GGATCAAGGTCTACGACGACGGCACCGTCGAGCGGTCTCCACCTCCCCCGGAGGCAAGCC
AGCTAGCAACCGCCATTGCGCCGTACGACGTGCCGCGCGACGGCGTGACGGTGCACGACA
TCCCGTCCAACCCGCCGCTCCGTCTCTACCTCCCGGAGGCAGCTCGTCCGGCCGGTCGCC
GTCTTCCGGTCCTCCTCCACTTCCACGCCGGCGTGTTCTGCCTGAGCGACCCTACCTGGT
CGCTCTACCATGGCTTCTACGCCCGTCTCGCCGCCTCCATCCCCATCGCCGGCATCGTGT
CCATCACCCTCCCGCTTGCTCCGGAGCACCCGCTCCCGGCGGCCATAGACGCCGGCTTTG
CCGCCATTGACTGGCTGAACTCGCTCGCTCAGCCCGGGCTGCTACCTGAGCCGGCGGGCA
GGCTCAAGGCCGTGGCCGACCTGTCGCGCGTGTTCCTAATAGGTGACAGCAATGGAGCCA
ACCTGGTGCACCATGTCGCCGCCGGGTTCACCTCGGCGGAGCGGGGCCAGGTCCGGCTCG
CCGGAGCCATCCTGCTCAACCCGGGCTTCTCCCGGTCCACTCCGAGCCGGTCCGAGTCGG
CCGAGGTGCAGGTGGACCCGTACATGGACTACAAGATGGTGGACAGGTTCCTGGCGCTGG
CGCTCCCCAAGGGCGCCACCCGAGACCACCCCTACATCTGGCCCGTGGGGGACGACGCGG
CGGCGGCGGCGCTGGCCGTGCCGCCGCTCCTGGTGAGCGTCGCGACCTTGGACACGATGC
GTGACCGGCAGGTGGAGTACTGCAACGTGATGCGGCGCGGCGGGAAGGACGTGGAGGTGG
CGCAGAGCCCCGGCGTCGGCCACATGTTCTACCTGAACCAGGGTGCGCCCGGGCCAGCCG
ACGGGGAGGCGGCGGCGCGCGTCGCCGAGCTCATAGAGGCCATCGGGGGCTTCGTCGGCA
GGCGCCACGGGTGTGTCGCTCGGATGTAAGTGCAAGTGCAAGTGTGTGTTGTGTCATCGG
TGTGCGTTGCTGTTCTTAATCATATGCATCTTGTGTGCGTCTCTCATGGCAATGGATTTC
GTGAGTTGCGAGTGGTTTTTTCATTGTTTTGTTTGAAGGGAATGTAATGATTCATTTTTT
CTTTTCAAAGTATTTTCTTTTCAAAGCTGAAATTAAGGTTTTATTTAACCAGAATGAAAT
GATTGTTGGGCTATGTGGTGTCATGGCCACCTATTTCTCTTTTCTTCTTGTCTTTTTTGT
TTTTGTTTTTTTTTTTCTTAAACACAATACAAACACAGACGGAAAAACAGAGTCATCATC
TGGAAGTGACCATGGTTATATGTCATAAAAAATATATTATTGATTTTTTAAAATGTACAT
CCAGTGACATGCTTCCTCCATCCGAAAATACTTATCATATAAATTAATAAATGTATCTAA
GATTGAAATACATCTAGATATATCCATTTTTATGATAAGTATTTTTAAACGAAGGGAGTA
CTTTTTATGACATATGACTCATATTTTATTGATAAAATTAGAAGCCAAAGTTAGACAAAA
ATATGAAGTATCCTTGTATTAGTACTACTCCCGCTGTCCTCATTCCTCAAATACATGGCA
TATAAACTGAGTGAAGAAGTCCATATTTTTTAAGTTTAACCAAGCATATATATATACTAA
AATATAAAGATAAACAATACCAAATCGATGTCAATATAGATATATTTTATAATGTATTTA
TTAAATATTATAGTTGTTAACAGTTTTATTTATATATTTAGTCAAACTTAGAAATAATTA
ACTTTTCGAGGGAAATGTCCTTCTACACCCGAGCTCAAATGAGCTTGGATGAACAGTAAA
TTCATTTATTTTTTTCAAAATGTTGAGAAAAGCTTGATTTTATTATGGTAAACTTTGACA
AATGTATTAAGAGCTCGCAAAATTTCAGTACAAAATCATATTTGTGAAAGTCGTGACAAA
AATAAAATAAAATTAGTGCTTCAAAATGCTTACGAAAGTATAATTTTCAGAGTTTTGATT
TTTTTTATCATGAATTCCTTTTTTAGGGACGAAATTAGAAGAAATTAGCATTTTCAGAGT
TTTGATCATTTTAGAAGAAATTAGAACGAGTACAAAAAGTGATACAACACATGACACGGA
CGCCAAGGCGTGAACATGGTGCACGGAGCAGAAAGGCATATGATGCTCGACCCAAAAAGG
AAAAAAACACAGCTAAGCTCGCTATACTGGGAAGTAGCGTGGACCACGACGACCAACATC
TCCACATTCAGAACCGAGGACGCCTCAAGCAACCAAGGCAACACCTTCACGAAGGAGAAT
GACGCCGAGACGCAATCGCCGTTCGATCCAGATAACTGGACCTAGGGTTTTCCCTGATGC
TCGAAGAGGGGCACAAAACATCGGTCGTGAAAGCGCCTCCAAGAAGGGGACGACACCCTC
GGGTGTCACTGCTGCCAGCAAAAGATGAAGGGATTTCGCCCTAGCCAGAGTCCGAGCAAT
CCCAAACCATCAGAGCAGGAATCAACGAAGAAGAAGTCGGGCTAAGGCGTGAACCACAAC
CACAAGAGTGGGAGCAATGCGGGCGCGCGAGCAAAGAAGCGTAGGAGGGACCGACGAGGC
ACGGAGGCAGCCGATGGGTGACTAGGCGGAATGAGAAGCGGTGGCGGATGACGATGGCCG
GTGGCCCGAGCGAACCACGATCCTGAGGGTAGCGCAGATCCAGGTCATCGGGACCGAAGC
AACAAGGACGCCGACGAGACCAGGGAGCCGAAATGGGGTGCAGCTCCCGGAGAATGCTAG
AGTTGAAGACGCATCGGGATGGGCGGCCAATCAAAGTGCCGACAGGGTGGGGGTCCAGAG
ACGCCGACGAGCCGACGAGCCAAGGGAGCCGGAAGGAACGCAACTTCTGGGGCGCGTCGG
GCCCAGAGCCGACCCGACCAACCATGGACGCTGGAGGAACCGCAGGTCGCCCCTACCGGG
GTGGTGGTGGTGGTGGGCACGCGTAAAGCCGAATCCTGGCCGCGCCTCCGAGGCCGCTGC
CCGAGGGGGGCCTGTCCGAAGCTCGTGAGGGAGGGGTGTGGGGAGAGGATCCGCAGCACG
GACAGGGCGCCCGTCCGCCGGAGGAGACACAGAGAGCTGGGGACGTCGCTGTCGGTCGAA
GGCGAAGCTCCAGATCCCGTCGGGGGAGGGCGGACGCAATTGCTTGAGGACACGAGGAGG
AGGCCTGCAGGAGGTGCCAGACCAGCCATCAGCCACGGGAGGGGGGTGGGGCTGCACGCA
GACGCCATGGGAGGGGCTCCGGGGTGCTCGCGTGGTGTGCGAGATCCACCATGAGGGGGG
TGGGTGGGTGGTGTGTTCCGGGGAGGCGCAACACATCAGATCCCCCCCCCCCCCGTATAA
CTTCGTTTAATGTTTGCTATACGAAGTTTTTACGCACGGCCCCCTATTTCTCTTTTTTTT
TTTTCTTTTTTTTTTTT
