Contig Data
morexGenes
Links



Map Locations of contig_51642 (8120 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51642

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66494 2 911 bp AK370601 Not available Available None
MLOC_66493 1 150 bp MLOC_66493.1 Available Available LOC_Os07g08070.1, FRAME:+1, EVALUE:5e-20, 13107.m00796 protein transmembrane BAX inhibitor motif-containing protein, putative, expressed





CDS Structure of MLOC_66494






CDS Structure of MLOC_66493






Contig Sequence (8120 bp)

>contig_51642 8120 assembly3_WGSMorex_rbca.fasta
ATCTATAGTAGACCACTGCAACATCGTATATGTTTCAGAAACATAGTCTTTGTTGCAGAA
CCGCATAGTCACTTGGACGCGTGTCTTACGGGGGAGGTGGCTGATGCGGTCATTATAATC
CGCCGGCTGATGGTTAGCTTTTCCCATAAACAATAAACTAAGAAACACACTGTCATATAC
TTACTTTGGCAAATCCGATTTCCCAGGATGCAACACTGTAGAATATTTTCTGCCGTCTTT
GCGGGAAATGAAGGCCTAAAACAAAATGTATTCAGATATCATGTCAAATTTCCAATATAA
ATATGTTTGTTTATTTATTTTCTAACTCATAGGAACTAGCATAACAGGGTAGTCATATAT
CTCACTTGGCAACTAATGCATGGCTGCAACATGCGGGTAAGAGTTGGAGAGCGTTTAAAT
AGACCATTTACTTATGAGACTATTGTTCTGTTCATTTCAAGTAAAATCTTACTGATCCAA
ACATATGAATGTTATAATCAAGTATGACACCCCCAAAGAATGGTATAAAGGTTTCACTAT
CATACTCATTATAACATTTTGTAGTCCCTTCAAAGAATGGTGTCTTCATATTTTTACCAC
TTGTGAGGATTTTGTCTGTTCTTCCTCTATTTTGTTCTCAAAGGGTTAGGTTTAGCCCGT
AAGAAAACATTGTTAGGAGTTTAGTCCGTAATGTTTAAACTTCTATCAGACAGCAGGGAG
GCAGAAAAAGAAAATTATATAATCTTTGGGCCACAATACAAGCTGCATTGGTAGCCCACT
TAACTTAATGTGACCCCTGCTTAACCAGTGATTTATATATAATTTTATGAATATATTGTT
GCAGTAGACCAAACCGCTACCTTGATAGCAGCTTCTATCATGGTCATGTCGATTACAACA
GCAATGATATAAACAAAAAGAGCACATATATGTGCCAAAGTGGAATGGAAAAGAAGAATA
TTTAGGACTTACAGAAAATTGATTTGCCATTACTGGCTTATCTTCACAAGCTCCTGGGAA
CAATTGCCAGCGTTGAAACTCACCTTTGCAGCTTCTTCCAATACTTCCTGCACTACAATC
TTCCAACAATTAGAGGATAGTGTACTGAAAGCTCCATTAAACAAAAGAAGAGTTTTGAAG
CATGCACTATTAAAAAATTCTTGGAGAAAATAAACATAAATTCTACGAGGGGATACAATA
ATTTTATTCATCAGTAGTGAAAAAGTACAAATGCAGAACACACTCGTCCATATTTCAGTA
TGATACTTGCCTCCAATTCCAATTTTTATCCCTAGTTAGCACAATAAATTACATGCAGGC
GACTGCAAGTGCAAACATGATTTATCAGCATACTGATCAATAAATAGGCTTTAAGTATAT
ATCGTTTTCCCCAAGGAGTTCAGATCATTGAGAATGGATGAATAAATAGAATCAACAGAA
GCCTCGGAAATAAGTAGAGTGAACAAATATATCAAACCCATTTGCTCATCGAACTTATTG
GAACATGTTACATAAAAGCAAAAAAGTAAAGCAGGAACATGATAAGACAAGCACTGGATG
GAAAGGCATTCAAAGTCCGCTAAGCTCACTTGTATGGCACACAGTTCAACAACTTAAAAG
TAGTAAAATAAGTTTTCTATGATAACATAAAAACTATGATGGATTCCACACTCAACATCA
ATAAGGAATGCATGTTCACTGAGAGAAGTCAAGAAGGTATACCCAATTCCTCCAAGTGGA
ACACCCTGACCAGATCTTGCAGTGCGCTTCTTCATGGGATCAATAATAGCAGTCTGTACA
AAACTAACAACGATCAGAAAGAGCATCTGTAAACGGGGAAAACTCCACAGAACAATGAGT
AGTACAAGCAAACATGTGAAAGCGTACTCGTCCTTTTGAAGTTTCTTCAAGGATGTGTTG
ACCAAGACGTAAACCAAGACCAGCCTGCAACAATGAAATGAATCTAAGGCAAGGAGAAAA
TATAACAAGAAATGTGAAGAACAAAGCAAGAACAGCCAACAACAATCCTAGTAAGAACCC
AAAAAACGTCAGAAAAAAAGCAGAACATAAGAATTCTAGTTAAGGTTGCCAATAATCATC
ATTATTCTTATAAAAAACAGCTGGACCATTAAAACAATTATTCTCAGATAAATTTCAGCA
GACCATAAGATTAGGAGTTCCATAAAGGAGAAGACATACCATCTGCCGTATCTCCCTCCA
TGTAAGTCCGAATGCCGGCAAATCATATCTAACATGGCTTAGCTTGTGTTCCCATGTCAA
CTCTGGAATCTGTCCAGGATTAACCTTTTCCTGACAAGTCAAGGCACCATTTGAATCTCA
AATCTGACGGAGGCACTAAATAAGCAAAAAAAGGGTGAATGGCAGTCGTACTATTTTCCC
TTTTTTTCCTTTTCTTTTGAACTTGATCCACGTGTTCAAATTGGTGGTTAAAAGAGTTAA
GAATGGATGACGTGCACAATGATCATCTGTCTTTATGTACACTATTAAGTATTTTTGGGC
CGCATGTTACAAGGATTTGCTTGAGAACGGAGAGCAAGCAACTGTTATTGATAGTGAAGA
TGAATAACAGTAGTTTTTTTCCTTCTAATACACCGAGACACAAAACCTTTTGCATATTCT
CAGAACAGAAGGTATCAAACATTTCAATTGTCAGTAAAGTGTCATGGTAAGGAACATATC
TGGTGGCATCTTACAAATGAATCTTGGAAGAAATAACTCACTGAATTGACAATGCTTTGC
GAATGTGAACTGTTCAGAGACACGCCGTTTGGTGGCTCATGGACATCCTTCACCATTTTT
TCCTCCTTCGAGCTGGGCCTGTAAACAGATTGAAATCCGAATATGTAACAGGTGTACTGC
TTTGGATTTCCTAACTATTTGAATATGTTCATTAGAAAAAGCATATAGGGATGGAACAAA
TACTGTCAGATCAACTCGAGATAGGGACGCTGTCAGCCATTTCCTGTATCCGGTACACGC
AGATACTGAGTATCTAGCATCGGACTATCAATGGAGTTGCATGTGTAAAATAAATCGAGC
ATGTGAACTGAAGCTGACGACACTGTTGTGCTGGCTCATCAAACTTCAATAAAACTACCA
ATAAAAAAGATTCCTTGCTTTTACTTAATTGCAGAGACAGACAAACAACAGAGCACGGCA
TCTCATACACATACAGGGAGAAATGGATTTTTTTTCAGAACTGAACAACAGACGACGCCA
AATTCTCAACGCACGCATTGATTATCACTAGATGAAAACAAACAGTGTTATCGTTCTCTA
TCCAGCTGCATGATGCAAACACGGCCCCTCGAAAATCGCAGAGAAAATACAACACGGGCA
ATCCTACCGGGGGAGGGAGGAAAATGGCGAGGACGGTCCCCGCAAGAACCAAGAACACCC
GCGAGAAGCAACGGCCGGGGCGCCAAAAGGACCCCCTCCTCCTAGAAATCGGGAGAGAAA
GCCCTGAATCGATCCGAGCGACAATGGGTGGGGAGGAAGAATCTGACCTTTCCCGATCTG
AAATCCGCCCGCCGGGGATCTGAGCTCCGCCCGCCCCAGAAGGACTAGTCGGAAGGATTA
GGAACCCGGGAGCGCGTGGGATGTTGGAGGAGGAGGAGACGAGACGATGCCTGCCCGGGA
GCAATCGTATCTTAACCACCACGCACCGACGTGGCTTCTTCACCTGTGGCTTTTAGTTTA
CTCGAGGCTGGAGAAAAACCCCACGTATTTGCGGAGCCGTTCTGCCGTGGGGCCAGATCG
GAAAGCGACATCGCATCACACAAATCTGATGGTCTGCAACGTACGTACATAAACATTCCG
AGACAGCTGCTAAATTAAATTGAATCGAATTGAATTCAACAAATTTCAGATGCCTAGCTG
ACTTTTCTCCGTTCGACTTCAGACTTGTGCACAATTGGCCGTGCTTGAGCTCGTAGTCGT
TTTCCAACCACAGGCCGATTGATGGTAAGCCCGCAAAAGAATAAAGAATATCTAGTTGAG
TTTGAAAAACGCCCAAAATCTAACTATTGTAGTATGAGTTATACACATCACACAGGGACA
GAAGGTCTGGCACGTTGATGTGACCATATGGCATCACCTTTCGTTTCCCTCCGCAGGTCG
GCGTGCCGCGTGTGGTGAAGGTAGTCGGCCAGTGGGTCTATGGATGTGAACAAGGAAAAT
ATTTTTCCGGAAAATGAGAACCATTTCGGACGGTAAGAATGAAATTTTTGTGCTCATGAA
AGTAAGTTTCCACTATGGACGGAAATTAAGAAGCATGTCTGCATGCACATATGTACACAT
AATACTAGTTCTCAAAAGGCAAACAAATTTGAGGACAGTTCCAAGGAACACCGACCTCAT
GATTTAAGGTGTGGTCGGCATGAATTATAATGGAAGGCTCGAACAACTGCAGCGCCATAC
TGTCGTTGCAGCTCCTGTCATGTTCAAATATGATATGTGCATATTGCAGCTGAGCGTACC
GATACGAACATGATGGCGGTGTCTCAACTCTGTCGAAACCAAGTTAGCTCCTCGAGTAGT
TTAATTAGGGTTAGTACGCTTTGACCCAATTTGCTTGCTGGGTAGATGTCGTGAGAAATA
AAGTATGGTTATCTCTTTGAGCCTGAAGATAATCGATGGCCATATCAAAACGTGCAATAT
TGCACTACAGGAATAAGATAATTTGTCGTTTGCCTCATCTTTGTCGTCTACCGGCAGATG
GCAATAAAACTCTTTGCCATCAGCTTCCAAAAAACAGACGTCAAAGAACCCACTCATGAC
GAAGATACTATTTGCCATCAGTGCGTTCTTTGCCGTTTGTCGGCTGACGGCAAAGATGCG
CCAGGCAGACGACAAAGAAAGTTGCCGCCAGCTCCATCTTTACCACCAGCCGCCACCTCT
TTGCCATCTGCCTCTCCCTCTTTGTTGTCTGCTAGCAGATGGCAAGCACACGGCAAAGGG
GATGATCGCGTAACGGTAGCGCCCGATCCCCTCCCACCCCATCCCCCCACCTCTCTTTCT
CCCCCACTCCCCACCTCTATCTCTCTCCCTCACTCCCCACCTCTCTCTCTCTCCCCCATC
TCCCCACCTCTGTGTCTCTCCCACGCCGCCCGCACCACCACCACCGCGCCGCCCCTCCTC
CTGCGGGCTCTCCCGCTGCATCACCCCCTCGGTAACCGCATCTGACCCCTCACCCCTTCC
CCGCTAGGGTTTCGCCAGCTGGCGCTTCCTTCCTTCCTTCCTTCTCATGGAGGACGTGTG
CACATGTTCCCTCGCAGAGTCGGCGACGAACGCGTTCCTACAGGGGCTGGACCGGCACCG
AAGGGGGCGCTGCACCCGGGGGGGAGGGAGAGCCCGGAGCTGCGATGGGCGCTCATGCGG
AAGGTCTACGTCGTCCTCTGCGTGCATCTTCTCCTAATCGTTGTCGTCACGGTCGTCGTT
GTCAAGGTCCGCGCCATCCCCCGCTTCTTTTTCTCCTCGTACGCCGGCCTCGGGCTCTAT
GTCTTCCTCCTCATCCTCCCCTTCGTCGGTGAGGCCTCAGACCATTTCTCCTCCATATTT
TCCCTTAGAATTTCTGATCCAATCGATTGCGGGGAGGGTTTTCTCTTTTTTGGTGTAAGA
AACTTTGTGAATTCTCGTCCCCAGAAAAGCTTTGTGAATTCTTTATTTTTGCAGGAATGT
CCCATGCACTCTTAATTTTGCTTTACTATTGTAGAATGGGACGTGGTTGCTTTGTGAATT
GCAGCTCGAGCATAATGTGTTACTAAAATGCTTCTTAATATTTTGCATGCAGTGTTGTGC
TCATTGTCCATCTACCGCTAGAAGCACCCACTCAACCTGGTGCTGCTTGGTGTCTTCACA
GTGGCCATCAGCTTCTCTGTGGGCTTGACATGTGCCTTTAATAGCGGTAATTGTCTTCCC
ACCATCAGATTATGTAAATTAGCTCCTGCTGCCAGCTCCTAGCTTGTTCTTGAGTCACTC
TGCTGCTCCTGCACCATCAGATTCTTGAGTCACATCTGCAAGCTCCTAGCTTGTCCACCA
TCTGCCTTTAATGCCCCTCATTGTGTTAATTCACTACATATAAACGGGTAGTAGATATTT
TCGTACTATTAGTTGGCTTGTTAGTTCCTATTAGCTCCTAGCCTGTTCACCATGTGCGGC
AATTGATAGTTTCCTACTACTATTGTGAAGCATTTTGTTTGTTTGTGGACGGGGTTCAGA
AATAGATGTGTTGTCAATTTGCCATGGCTATGAAAATGGTAGACACGGCCAAGCAGCCCA
TGTGACTGTAGTTGATGCATTTTCCTAGTCTGTGTTGAGGGTTAAATTGTAGCTGTTCGT
CACCATTTATGATTGATATGCTTGCCTGAGTTAGAAGTATTTGTAGTACTGCCAGCTAGC
AGGATTACTTTTTTAGAAGACCTTGCTTTTCTATTTTCAGCTGAGTAACCTTCGCTTTTT
TATGAATAAAAGGGGTCACCCTGCTCCATTTTATTGATGAAGCATAAGACGACCGAGTTT
ACATCCATCAAACTAACAAAGACCATCACAGAAAGAAAACATCTCAGACGAAATTTTAGC
CAAAGTCACAACCGCTAAACAGAATAAAAACTATTTAACAGCAACACAAGAAACTTCAGA
ATCAGCTCCTCCAGGCAATGCGCAGAAGTTCCCCTCTGAATTTGTCAAGTTTAGAGATGA
ATTGCCGCAGTACCACCTCCTGTGTGGCGTCATAGAGAACAAAAAATTGCCGGAGAAAAC
TTCGAAGCTTCACAAGAACGCAGTACAGACTTTTCCATGTTCGACCCTGGAAACAAAATT
CATTTCTTAGTCTCCAAATACTTCATAAGGAGGTAGCCACAATCATGTTATGAACTGGCT
CTTTCTCATGACCCAGCCACAAGGCACAAATGTCTTTGAAACATGACATAATTGGCATTT
GAAAGGAATCCGCAAGAAGTTTCCAGATGCATTTAGCCACTACACAATCAAAGAATAGAT
GTTGTACAAATTCCAGTTCAGAACAGAATAAGCAAGAAGGATCCTCAACATTTTTCCTCT
TAGCCAAATTATCTCTGGTTAGAACTTTATTATACACACTTAGCCAAAGGAAAACATGGA
TATTTTGTGGACAGAGAATTTTCCATAATTTGTCACCAATGGTAGAAGCCACCCCACCAA
AGTTAACAACATTATAAAATGACTTAACAGAATATAGCCCTTTTGATTCCAACATCCATA
TTGGAACATCAGGGGACTCAGATAGAGGAATCTTTCAAATAATATCAAGTAATTGGTTCC
ATTTATCCACCCCTCTAATATCAACACATCTTCTAAAGGAAAGTTTAAGTTCTACACCAT
CCCAAACCCGAGAGACATTGCAGTCAGATTGGTTGCAAATGTAAAATAACTCCCAAAATT
GAACCTTCAGGGAACAATCCCCAACCCATACATCATGCCAGAACTTAATACTCCTACCAT
TACCAATTTTCCACCTATAGAATGTCTTGGAGGCATTAAGAGCCATGTTACACTCTTCCA
GAAAGAAGATCGATTATCAGATTCAGACCAAAGAATATTGGGGGATTCAGTGTTATACTT
TAAAGAGATGATATCTTTCCAGTCTTTTTTGTTGTTGTCAAAGAATCTCTTCCCCCAGGA
GGCCAATAAAAGCCATATTAAACTCTTTAAGGTTAGGTAACCCTAAACCCCCAAAGGATT
TCTTCCTAGCAATCAATCCCCGATTAGCAAGGTGATATTTGTGTTGGTCCCCTACATGCC
CCTAGAAAAATGTGCCATTTGAGAGTTAATGGCCTCAATGGCCCACTTTGGAAACTTAAT
CACTGTCGTAAGCTAAGCAGGAATACTGACAATGCAAGCACAAAGAAGAATCAGTCTCCC
TTTGTAGGTAAGATGTTTGCCTAACCACCCAGAAATACATCTAATGATCCTATCAATGAT
TGGTTGGGGATCTTCCCTGTGTATTTTTTCCTAGTGCAAAGGCACACCCAAGTACTTAAT
AGGGAAAGACTGTAACGACTAAGATGCGGCCCTTTCCTATTTTGGGGGCGATGCTCCAAA
AGGGAAAGAGGCGCATCTAA