morexGenes - Barley RNA-seq Database

Contig contig_51624
Source Contig contig_51624
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_51624 (8425 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_51624

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_66485	4	4135 bp	MLOC_66485.1	Available	Available	LOC_Os04g56180.1, FRAME:+3, EVALUE:0.0, 13104.m05842 protein peroxidase precursor, putative, expressed
CDS Structure of MLOC_66485

Contig Sequence (8425 bp)

>contig_51624 8425 assembly3_WGSMorex_rbca.fasta
GGCTTTTCAGCCTCCCTTTGCTGGTTCCGAACTATCACTGATCCCAGAGATCAACCTTCA
AACCTTTTTCTTTGAATCTCAGGAAGGCTTTCTCGGGGAGAAAGCTGGTTGGGGAACTGC
TAAACGGCCTAAAAGAAAAAGAGGAGACTGATAGTTGATGGTGGACTTTTTATCCTTCAA
TATGCCGATGATTCAATACTTTTTATGGAACATGACATAAAAAAACAAGTAATCTGAAAT
TAATCTTATCAACCTTCGAGCAACTTTCGGGTCTTCAGATAAACATCCACAAAGGGTGGA
TTGTTTTGTTTTGGCGAGGCTCGGGATGAGGTCCAACAATATGCTGAACTATTCGGCTGT
GGACTAGGTCTGTTTCCGATTGGTTATCTAGGTATTCTCAAACATTACCGGAGACTTACA
AAAGTTGAATGGAAACATGTAGAGGAGAGACAGCAAAAATGATTAAGTAGTTGGAAAGAA
TCTTTTTATCTCTGGATGGTAGATTGTCACTCATAAATTTGGTACTCGCTAATACGGTAT
TGTATAAGATATCATTCTTCCTGTTGCCCAAAGGGGTCTTACAATGTTTGGATTATTTTC
TCAAAATTCTTTTGGCAAGGAGATAGTGAGAAGAAGAAATATCGGCTCGCTAAATGGAGT
CCGGTTTGTCGTCCCAAGGATATGGGTGGACTGGATATTCCTAACCTTGATGTCAAAAAT
ACCGCTCTCCTAGGTAAATGCCTTTTTAAGTTACTTACCGAAGACAGTGTATGGCAAACC
CTCCTGAAAAAAATATGTAGGTTCAAATGTGATATCCCATGTTAGTTGGAAGCCTGGGAC
TCGCACTTTTCGGTTGGTCTAATGGCTACGAAGAAACACCTCTTCTGTTTTGGATCATTT
TTCTATTGAGGATGGCTCGGAAATTTGTTTCTTGGCGGACAAGCGGCTGGGAAAATTTAC
TCTCCGGGAACAATATCCGGCTTTATACAACATAGTGCATCACAACGACGATACTATTGC
CACGGTGTTGGAATCTTTCCCACCAAACGTGACATTTAGGAGAGATTTAATCGGCCCGAT
ACTTGCATCGTGAAACGTTTTATTGCAGTGTTTGCAACAATACAATTGTCACAGGGTGCT
GACGAGTTTCATTGAAACTTACATGAGAGCGGTAAATTCTCTGTGGATTCCCTGTATAAA
GCGTTAGTCCATATGATTATGCCAGTCGATAGTAACTAGAAGATCTCGAAGATGAAAATA
CCACTCACAATAATATATTTGCATGGTATCTTTGTCGATGAGTCTTTCTTACAAAAGATT
AACCTGTTAAGAGGAATTGGCAAGAAAGTACAAGATGTTTTTTTTGTCATCGGGATGAGA
CAATTAAACATTTGTTTTTCGAATGCAAGTTCGCTCGATCTATATGGTCAGTCATCCAAA
TAGCTTCTGGTCTGTATCTTCCGCGTTGCGTTGTTAATATATTTGGCGATTGGCTATATG
AAGTAGATCACAGGTTTAGGATTCTAATTAGAACGAAAGTGCTAGCCATTATTTGGTCGT
TTTGACTATGTAGAAATGACAAGGTTTTTAATGATAAAAATTCATCTCTTATGCAGGTAA
TCTATAGATATACGTGTATTCTCTTTTTATGGTCATCTCTACATCTTTTAGAGTTGCGAC
CTATTTATCGAGATCTGTATGCGTTTGGAGGATACGACGAAGGATATTTTTATCCAACAT
GAATAACTACGTGATCTATGGATTGGGCAGCCATCTACCTAGGCGTCATATAGTTTCTTC
AAGATAATTTGTATTTTGCTTTTCTTATTGTGTTTGGACTTGTTACGGTTGTGTGCATTC
TAAAAATGTAGAGCCTGAATATAATACTTAAACCTTTTATGTAATAAAACACCCTCTATA
AAAGAAAGTAAGGCTCAAACACACAAAAGTTCATGCAATCCGTTCATGAAATCCTACATT
TGATTTCACCTCTTCTCAGATGAAGTTTGAATGGGACACGAATGCAGTGCATGTTGGTCA
CATATGATCCTGGCCTGCTACCTAGGGTAGGGTAGGTAAAGCGGCCGGATTTCTGTGCAG
CATGTCCGTGAATCTTGTTTTCTCTGGCGCCGGGACGTGCGCCTTGGGTGCCGGCCGGAC
CGGACAGAGGGGAAGGCAGGCGGCCTGGCTAGCTTACCGTCCATACCCATGCCCATGGCC
ATGGGCGCCATGGGCGGGTGCTGGCCGCGAGCTGGACGCAACGGCGCAGCGGCATGTGAG
GGTGTTTTGGATGGTAGCTGGCCACTGAATCTGCGCACAAGCAAGCGGACTATCTTCTAG
CGGAGGTCACGCCAGACCTGAGCTGAGCTGAGCCTGAGCGCCATACTGTAGACACGGTGC
ATGCAGGGCAGGCATGCAGCCACAGCCGGCCATCCCTTCTTGGCCTTTCGTTCCACGAAG
CTCCGGCACGCACGGTGATTGATAATAGTCGTTCGTGCTCAAGTGTGTTTTGTTGCTCGA
TAAAGCTCCTCTTACTCTATCACCAGCAACTCCTAGCACTACTCCTACTCTTAGCTCGGC
GTATAATCACTACTCGTGCAAGCTGGTCAAATGGATCACCCGCCGCAAAAAGGAAGAGAG
AAACCAACGAAAAACGTAAATAAATCGACCCACAAGCGCTCATCAACCAGCTCTGCGCCG
AGGGCTGATCGGGCTAAAAAAAGGTGGTTCGGTTCATCGATAATCGGAAAAGGAAAAAGA
TACTGCGTCCCGTCCATCCATCCATCCATCCGCGCCGAGATTGTAAAACCGTCTCGGTTC
CTTCCCGCCGTGGCCGGTCATGTTCATGTTCACATCGCGCAGCTCCTTTTCCCCGTCATC
TCCGCCGCGCACCAACGGAACCCACCCGGTCCTATATATCTTCGCCAATGCCCCCGCACT
TCCCTCCTCGCTCCCGCGCCCCCACGCAAGCGCACTCTCTCGCTCTCTAGCCGCGCAGCC
GATACAAATCGTGCGTGCCGGCGTCAGTCACGCCACGCACGGTGCGCGTCCACGCCGAGC
GGAGCGGAGCTGAGCAGAGCAGGGCTTTGCTCGACCGGCAATGGCGGGAGCCTGCTCGTG
CGCCGGCCTCCTGGCGCTGTTCGTGCTCGCGTGCATCGCCGACGCCGCGACCGCGCAGCT
GCGGCAGAACTACTACGCCACCAGCTGCCCCAGCGCCGAGTCCACCGTGCGCTCCGTCAT
CTCGCAGCACGTCCAGCAGAGCTTCGCCGTCGCGCCAGGCACGCTCCGCCTCTTCTTCCA
CGACTGCTTCGTCCGGGTAAGCCGCGCGTCTCTTCCCGTTCTTGCTCCGCCGTGCCTCGT
CCACGAGGTTGACTGGCATTGCTGCTCGCCGTTCCCTGACCGTGACCGTGCTGCTGCGCG
CAGGGGTGCGACGCGTCGGTGATGCTGATGGCGGCGAACGGGGACGACGAGAGCCACAGC
GGCGCGGACGCCACGCTGTCGCCCGACGCCGTGGAGGCCATCAACAAGGCCAAGGCCGCC
GTCGAGGCGCTGCCCGGGTGCGCCGGCAAGGTCTCCTGCGCCGACATCCTCGCCATGGCC
GCGCGCGACGTCGTCTCCCTGGTACGTTTCTTTTGGCCGCGCTATCCCGTGACACCGGGG
TACCCGGGCGTAGTGAGCCAGAGCGGGGCGTATGCGCCCCTGTCAGTCGCGCCAGGCTCG
CACGAACCCCAGTACTCTACTCTGAGATGCGCAAGTCCTGGTTGGCTCAGGCAGCCAGGC
TCGCCTCCCTCTCTCTCCTCCGTGACCGGTGACCCCAGCCGGGCGGGCCGCGGTCCGGCC
TTGCCGTGTGCGCGCAACCCTTTTGCTGAGCGCGGCCAGCCCCACCACGCCGGGCGGGGC
CGCAGAGACACTGCTCGACCAGCTTGCCCGTCAGTGACTTTTTAGACAGGCCACCGCGCC
ATCCTGCAGTGATGCATCTATGATCTATAGTCTAGTCTGGGGTAGCCATGGTCCAGCCAC
GCTGCCGGCCGGTGATCCGCGCCCATGGCCGTGCTTTGCATTGCAGAGTCAGAGAGATGC
GGCAGGGTGGCTCCGCTCGTCTCGATTGTTTCCGGTCTCTCGGTCCCTCCCGAAGCGCGA
AAAGGTGGTGGCTTACGGAGGACACGTGATGCGTGTCGGGCGCGTCGCGACGCACGCATG
CGCCGCGCGGCTCCGGGTGTCGTGGTGCTCGCGGCGCGGTGACCGGCCGGGTGCGCTGGG
CTGCCTTGGATACGTACAGCTAGCCTGCCTACTTCTTCAGCCCGGCCTCTCGCAGGCAGC
GACAGTGACGTGACCTGAAATGAGATGGGAAACTAGTCGGGTTCTGCGGGTACTCGCGCA
AGCAACCCCAGTTCACTGTGCGCTTGGTGTTGTCTGTGTGCTGCCCGTGACGGCGTTGCA
GCCAGAGCTTTGGCCCGAATGGATCCCCGAGGCCGAGGCCCCCGACGAGCAGGCAGACAA
AGTTTCCATTCCGTAGAGTCGTAGACCACTGACATGCATGCATGACGAGGTATACACGAG
GCGTCCAGGCGGCAGCCCCCCGCTGAAATTCCGTCACGCTAAAACGAAAGGGTTACCATG
TAATCAGACTGACATGTTTACTTACTTGTAATCGTCGTTGTTGCTGTATGTAGACCGGCG
GGCCGAGCTACGGCGTGGAGCTGGGACGGCTGGACGGCAGGTCGTTCAGCAAATCCATCG
TGAAGCACGTCCTCCCGGGCCCCGGCTTCGACCTCAACCAGCTCAACGCGCTCTTCGCCA
CCAACGGCCTCACCCAGTTCGACATGATCGCGCTCTCCGGTACGTCCTCCATCGCACACC
CATCACTTACTTGAAGATTCCTTGTTGGGGTTGCACCGTACTATTATATTCAACATTCGG
TAAGTAGTAGGAGGAGGAGTAGCAGGTTGATCGCAGCGCAAGCATCTTTCTATGCCACTC
TGCACGGATTCACGTGATACATGCAGAGGACAAAGCGGCCCAGTGTTTCATGCTCCTGCA
TCCCTCTGTTATTTTTCGATGAAAAGATCCGCTTTTGTTTTGTTTGCTTCGAAAGTAGAA
AAAGAATTCGGCAGAAAAATCTGACACGGTGAGAAAACAGAGCTCATTTTCTTCGAGGGG
AAATGGAGGCCTCTCTTGCACAGCAACACGCCCCAGAATCTACTTTCGTTTGGAAAGACA
GAGAAAGTCATGTGATGTTTCCTGACATGCTACTAACATAACATCATCAGACATAGGCAG
CAGGCCCGTTTCTGTGTTTGTTAACGCTTGTTTTTTTGTTCGATTCCGTATTGGGAGTAT
AATAAACTGCATCTCGGTTACAGTAGACGAGCACACAAGACAGTTTGTCTGAATGTTCTT
GGTTTTGTGTGAGATCCTATGCTTGCTTTGACATAACCGGAACGCTTGGATTCGGCAACA
AAGAAGGCCCACTCTATGATGACACAAAATAGAAACAAAGTACTGCTAGCAGTAACTTTG
GACCAAACGGCCAATTAGGTCCATACAAAGTAAAAAGGACTGTTCTGGGAGGACCAGCCG
AGGGGCACGCATGTTTTGCCTAAACTATTCTTCTCTCTTCAACTGACAAAGCCGCGGGCA
CTTGCTGCATTCAGCCCTGAATTTTACACTTGCGTGTGCTAAACTTGCATATTTTTCATT
AATTTGGCAAAAATTCACTTTTAATTGCTAGAAATGATTCATTCAGCACACATCCAGTTT
TTTTTGGGGGGAAGAACCTTGCTGTATTTTATTTATCAATAAAATTAAAGATCATGAAAA
TTTCGCTAAGCTATGAGCTTCATGATTGCTATTCCGTACCCTCAAAAAAGAAAAGATTGC
TATTCTGTTTCGTTTTTTAGCTTTGTCTAAATTTGTTTGACACATGTGCGTGTGTGTGTG
TTGCCATGACAGGTGCGCACACGATCGGGGTGACGCACTGCGACAAGTTCGTGCGCCGGA
TCTACACGTTCAAGCAGCGACTCAAGTACAACCCGCCGATGAACCTCGACTTCCTGCGGT
CGCTGCGCAAGGTGTGCCCCATGAACTACCCGCCCACGGCGTTCGCCATGCTGGACGTGA
CCACGCCCAAGACCTTCGACAACGCCTACTTCGACAATCTCCGCTACCAGAAGGGCCTGC
TCGCCTCCGACCAGGTGCTCTTCACCGACCGCCGCTCCCGCCCCACCGTCAACCTCTTCG
CCGCCAACTCCACCGCCTTCTTCGACGCCTTCGTCGCCGCCATGGCCAAGCTGGGACGGA
TCGGGGTCAAGACCGGCAGCGCCGGCGAGGTGCGCCGGGTCTGCACCGCCGTCAACTAGC
TTTCTATTTCGGTCGTGTGTGCGTGTGCGTGCGTGTGGGTTAGCCTGGGTCGGTAGGGTC
GTGAATTACTTGTGATGCAGCGCAGATGCAGGGTGTTTTTGCTCGCGTGTGTGCGTTAGT
GTGCTCATACGCTACGTTTTGTGGTGGGATTGTGTTAACCATTCTTTGATCGGGATGTGG
GATGGAATGGGTCTTAACGGAAAATGGGACTATTAGTCACATGGTTACGCTGAAACAAAT
GCAATCACTCTGCTTTTGTGTGGCAGTGGTAATCCTTTGGCTCCCAACAGGGACATTCAG
TTTGGCAGTGCCACACCTCCGTGCTCAGCCACTTCCCCGAAATCCTCTCCAACGATTCCC
AGGTCGTAGTTCTCTGCGATGGCGAGTAGCTCCGGATCTTGGCACTGCCATCATTGGTCT
CTGGGACCTTGGGCTCCATGGCTGTCAGCTCCTTGGCGACGAGGAGGACCAGATGCCGTC
GTTGCAGTAGCTGCTCCTTTTCTTGGAGGCCGTGGTGATGGACGAGGAGTTCGACTGTCA
GAGGGAGTTCATGACGGATTTGTCGCATCAGGAGCGTGGTCCGGCGCCACCATCGCCGCC
GCGTGCCAAGGAGGAGCCGGATTCCTCGCATTAAGCAGGAGACAACGTCGCCTCTTCGCC
GCCAACCATGTGTCATCAAGAAGTAACCGCACTCCCCGCCTCCCCGGGGCACTACCATGT
CAAAGTACTCTCCGTTTCTAAATACAAGTCTTTTTAAAAGTTTTACTAATGAATTACATA
CATATGTATATAGATATATTTTAAAGTATAGATTCATTCAACTTGCTTCGTATGTAGACC
CCTAGTAAAACGAAGGGAGTAGACCCTAGTAAAACGAAGGGAGTAGGAGTTGGCGTCGCC
TCTCTGGTCCATGAAGTATGAGCTGACATCACCGCCTCGTTGCAACTCGCGTGGTCAGGT
CATCAAGGAGGAGCTGCCACCCGCGATCAGGCGGGCACACCTTTCACTGCCTCGGTAGAG
GCGGCTTCTTTTTGTTGCGGGCCATCTTGTCCACTGAGGATAGAGTGACGCGATAGGAGT
GGCGCAACGCGTGCTGCCGTTCTACGTTTGCTAAGTCATGTTAGAATAATCCGAGGCTTT
CCATCGATCTACCGAGGACCAAGCAATCATACAAGCACGACATCGAGATTTGTTAACGAG
GTTCACCAGTATGGCTATATCCCCAGGGCATGACTACGGGCGCTCCTCCCTGTGACACCG
TCACAATACCACACGCCGGCTCCCCCACGTGCGTGTGCTATTATATTGGCATATGTTACA
TCGTGTGTCCACCCTCTCATCGTATCTCAAGTCCAACTGTAACCTACCATGTACAATAAT
ATTCGACACAACTCTAACAAACTTCACCTTGGCGAATATTCTATGCCACCTTGGATTCAT
CCATGCGTTGAACCTCCATGTACATTGGACTTGAGATACGCCATGAGCATCACTGCTACT
CCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTTGTTTTCTTCACAGCCAA
CACTCGAGCAAAATTAAGTTTCTCATTACTCTACTTTTAGCTTTCAACTTCCAAAGTATC
CGTTCAACGCCATCACACACTGATCACTGACCTGCGTGAAAGTGAACAACTCACTTATTG
AATGCCATATATAAAAGTTACCTGAACTCAACATCCTCGCTCTTTCTTGACCGTCCGTCT
GAAACTTGAAGGAATTTCACCATCGCCTTGTGTCACCCCGAGTCAAATTCGCAGTTGTCT
CATCCTTTTCTCGGGTAGTCTCTGACATGTCCCACAGCTATAGCACTCCGCCTTCTTCTG
TACTTGTCATCCGCACTTTGCCATGTGCACTGAACACCATAGAACATATGTCCATGTACT
CTCTCCGTTTATGACAATTCAGACTTTCCATCACTTTCTCAGATTCTCCATGGTCAACCC
CCGTCCATCAACCGTCACCGATTAAACAAGTCAGCAACTTGAATCCGATACTCGCTGATT
CCTCCATTTTGCATCATGCTTTCAT