morexGenes - Barley RNA-seq Database

Contig contig_51565
Source Contig contig_51565
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_51565 (8185 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_51565

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_66445	1	2225 bp	MLOC_66445.1	Available	Available	LOC_Os02g01590.1, FRAME:-2, EVALUE:0.0, 13102.m00080 protein glycosyl hydrolases, putative, expressed
CDS Structure of MLOC_66445

Contig Sequence (8185 bp)

>contig_51565 8185 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGTGTGGTTGTTACCTTGTAATGGTTTCTAAGTGAGGAGGTTTGGGG
ACTAATGCTTCATGGGGGAAAAGTAATACGAAATGAGAAGATTTGTCGTCATAGTGGGTT
GTCATAGATGCAAAATCATTTCCATCGCGGGTTTTCCCTCTGCGTGGTATTAGGAAAGAA
TCACAAGGAAATCTTAATATTTTAGAGAAAAACAACAAAACATTTCAATCCATGTCATTT
TACCGTACCAGGTAATCGACCCAAAATTATCAGTAATGCAATCCACGTGCCAAAATAATG
TTTCGAAGATGTATACCCCGCGTTGCATCTAATACCGGAAGGGTGGCGACCCACGACCCC
GTTCCTCGTTCCTCGACCCGGACGACCCAGATTCGTGGCAACTATATGGCTACAACATGG
AAATACAATTTTTGACAAACAAAAAATGAGGATGTAGATTCCATGGAATGAATAGGCCCC
ACAAATAATGCAGCAAACCGAAACCGATGGTGTTTTTGTCGGACCCTCTTGTACCACCAG
CATGGGCACCCACCTACCTTACTCTCCTATGACATTTCTTATTATCTGCATCACCAAACC
AAACCACACAAAATTGATCAGGAATGTATAGATGTGTGGCCTGGTTAAGCTAGCAATGGC
TGGTGGTGGTGGCACTGGCAGGTACCGTTTGGGTCACAGCTAGTTCGATGTGGATTTGTA
CCGGACACCCTCCTCACTTACTCATGTCCCCTTGGGCGACAATTCATGGCCTCTCGTACA
CTTTGCCACGCATGCAGACACACCGCTCGGACGCCACATGCACAGCTCGACATTAGCGGT
GGGAGCTGTACAGAGATGCATCCATCTGGACGTAACTACCGGAGCCAATCAGCAGCAGCT
AGCTATCCAGGCCAAGCAACATTTTCTTTCTAGGGTACAGTAGGTAGTAGTGGTCCTCTA
GAGTGCTTCAGCTCCACATAATCACAAGAAAACAAACATGAATGGATGGGTGGATGATCA
AATGGCCAATCCGTCATGGATAAGAGAAATTTGGAGCTATAGTACGTACCCAAGGGAGCT
GGCTACGCCAATTAAGCTTCAAGGGTCTTGCTCTCCGTGGAACCAACCGAACGAGAAACA
AGTAATTGCAGATTCGACATCATTGCCAGTACAATAATACAGGTTTACGTGTCGCTAGCC
AGCCTCAAATGTCTCATAGTATTTGTTTACAGAGTGAGTAGTAGCTAAGCTAATGCTAAT
CAAGAGATTCCCTGCAAGAAAATTACGAGATCAATCATCTAAATTTCTTTAGATAGAATC
AAACTACGCTCGTGGCAGCGGACCTCTCCAAGTTTCAGCTCGATCGATTAGTGTTCTGTT
GGCTGGTGGGTGCTACCACATCAGCAATTCCTTTTTAACTCTTACTAACCATGTGACAGG
GCAGGGTGTAACAGGTGGCAACCATTGATGGCAGCTAGCTGCTAGCTTGTCATCCATCAA
GGACTAACAACTAACAAGAAGATCAACATCACAGTCAAAAGATATTCAACAACTATGAAT
AATGGATATGGGAAGAGAGGCCGGGAGCCCACACGACACACAAAGAGGGGTGCATCCTGC
GTGTGTGTGTGTGTGTGTGTGTGTGTCTGAGGGAGTGTCATTGTCCTATGGTTTCAAGAA
GATTCATCGGCATCACGCAGGTACAATAATGCATCCAGAGGTAGGGACAATGAATCTTGA
CCAGACTCTATTTTTAGTCATGCAAATTCTCAAACCCGGCCCATCCATGAAATCCAAACT
TCTAGACGTGGCTCTCTCCACGTGTCGCTCTATAAGATCCATGCCATGTGAGATGTCATT
TCTCTTTTGGCGGTGGGCACACAAACGTTGCGTGCTCGCGCAACATAACAAGTGGCTATA
GTTGATATATCTACCAATGATTAGGAAGTCATGTGAAGAGGCTACCGGCCGTAGTTATCT
ACCAATGCGATGAAAGTTGGCCATAGAAATGAACGCACATGGGCGTTGTAACCTCGATGC
TTGGAGCTCAACGCCGACAAGGCGACGTGTGACAAATGGCAACATATTATTGCAGTCAGT
CATAATACTAGTTGACATGGCAAACTCTACTGCTTGGCAGCCAGCTTATAGTTTTTTTTA
CACCACCTATGCTCGTTTTTGTGTGATGTTGCCCACTTACCCGCCACATATCAACACGTA
TAGACGTGTGGATCAATATGTATGTAGTGTGGATAACTCAACAAGGTTAAGAATGAACCA
TGCATCCGCTTGGCATGCACACATGGGTGTGTGTGTGTGTTGTTACCTTGTTGACTCTCA
GGTTGTGTCTATTTGTCTTTGTCGATTATAACCTCTTTGGAGCAAACTTGGAAGCAACTA
ATGCATGTGCAATAATGCATTGTTCGACGTGGCAATGATTCAGTTTTGTTTGTGGACAAC
AATAGCAAGGCAGGAACCACACAAACCGGTTGTGATCATGTGTCTTTTTTTCTTTTCTTT
GCTGATTAATTGGGTTTCACGAAATACAGACTTCCGATAAACTAGCATGTAGTAGACGCT
ACAAAGGTTTGCATATGAACAACTAGCTTCATATGCAAACTTTCATGTAGTTTCATGAAG
AGAACACGGTGAAGTTGTGCAAACTACATGAAATTCTGACTAAGCCGGTTGGGGTGCTAC
TTTATTTTTCCTTTCTAAAACACCAAGCACACCAACCAACATGCATGCATAAGGCAAGAA
CAGGTATCCATGACAGCACCCATGGAGTAGGCGGATACTAGATCCACGCTGCTGGTGGCC
AATAATTCCAGCCGTCAGGTGAGTGGTGGAGAAGATCCAGAATCTTATTATCATGAGCAT
CCTTGGTAACCTCACGCTCTCACTGATTTGCAGTCCACATGCCATTGCCAGCTCAAATCT
TCCACTCCAATCTTCCTTTCTCTATCCATCTAATAAAATGCACAGATCCCTGGGATTGGG
CCTGGCATCACTGACCCTTGTCCATGAGTGTACGTAGACCGTATTACCTCCAATAATTCC
CATTTGTTTACACAATAATTCCCGTTTGTTTGTTTACCCAATCATTCCCATTTGGGTATG
CACAAGGTGTGTATGTCTGTGATAATTTCTTCACCGACCGAAACACCGATGATGCATGCA
CTATTTGAATCCCCGAGTGCAAGCTAGCTCGCAAGCAAAAGCAATCATGTACTGATTGAT
CGTCTTTTTTCTTTGGAAACGAGAGTATCGTCGCATGAAGCAACAAGATCACATGGAGCA
GCAATAATTCAGTAGGGAGCTGGAGTTGAGACAAAATAAAATCCACCAGCGGAATTCCGA
ACAGTGTTGACCACAAGCCCACACCATTGTTATTACAAGTACAGGACAAACACAACCATG
TCATAGCTTTTTTCGCAAAGGAGGTTGAACCCTGGCCTCTGCATCAATATGATGCATACA
ACCATATGACATAACTACTACCGGCAAAATATGAGCACTCAAAATTAGAATTAGTGAATG
TTTTCATTGATGTTAGAAATATAAGACAATACGCATGTGAGTCCTTGAGGTGAATCGAGA
TCAAGGTCTCTATTCTCGGTTGATAATTTTGGTAACTGACCGGTTAACAGTTTTTCCTAC
CCACCCCAAGAAAGTATGTATCTGGTATATTTCTCGGGAACCGGTGTTCCAGGTGGCCAT
TGGTTGAAAATTGATACTAGGAAATAAAAACCTTGGTGAAGATCGATTAGATAACGCAGA
AAAGTTGCAACGAGGAAACGAGAGACACCTTCCTTGGTCAAAAAAATAAGTACAAAGAGC
TATCTATCACATTTTTTTGTAAACAAAAATAAAATTTCCATTTTGTTTTTACAGTGAGGC
AGTGTAGGCCTGGTTGTAGGAGGAGTCCATCTCGTGGATGACGAGGCTCGTGGTGGTGAC
CCGGGCGCCGGTGGCGTTGTTGAAGAGGTATACCCCAGCGTTGGCGTAGATGGCCTCAGT
CGGGTACACACGTGACGTCGCGGTCAACCTCCCGCCCATTGCAAAGCTCTCAACGATTGA
ATGATCCACTAGCACCCTCACCGAAAACATCTCGCCATTGAGCACGGGAACAATATTGCC
TACGACCCTCTTAACAATATCGTTGGCATGAGATGAGCGCGTCTCGTCATGGCAGAAGTG
TGTGTGCAAGCCTCCATCGAGGCCTCTCGCGACGTAGAAGTAGACAGCGGTCCGCTCCAT
TTCACCACCGTGGTGCCTGGCATCAGCCACCACGAGGAGGCCGAAGGGACCGAGCGTGCC
CCGTCCAGTCGCGCCGCCGCTGGTGCTGCAGTTGTAGCCGACATCCGCTTCCTTGGCAGC
GGCGACGTCGAGCGGGTCAAGACGGAATGAGGCTTCGATGTCAAGTTGTGTGGCGCGGTG
AAGGCTGAGAGGGATTACGAAGCCGTGGTCGATGGTGACCCGGCCGAGGTCGGTGGAGTT
GGTCCGGAGCGTCTCCACCTCCTCCACCGGCCACTGCAGGAGGTTGCTCCCTGTCTTGTT
ATCTAGCACCACCGTCCGAGGGGTCGACTGCAACAATAACAACGAAACAATGAGCAATTT
ACACTAATTAATTACTCAACAAAGTATCTTATTGGTAGTTGGCACCAATCGTTGTGAGAG
CAAAGAAATAGTGTATTGATTAGCAGCAATCATTGCCAATATTTACATTCCTTTTTCTTG
TCTAATCCCTGTTTGGTTGGTACTAGCAGCAGAAATTGTTTATACGAATTCAGAGTTTGG
TAGCTGTACCAGATTGTTAATGTTGAACGCCACTATGCCATATGGGTCATGAGTCATGGG
CACGCAACTAACTTGAGCTGCAACGATAGCTGTTATCTATGTATGCATTGATTCATCTAA
AGTGGCTGCTGTTTTGTTCAAAAAAAAGTTGCTGCCATTATTTGCATGTATGACCATGGC
CCACACCCTGACTGTGCCATGCCGATGTGTCTGTGTGTGGAACCCGACAAAAAGTGCATG
CAACCCTACTAATGATGCAAATCACCAACGAAACAAATTGTATTAAGAATCAGTTCATGG
AGGTTACTCAATCAACTGACTTTGCCATCTTGTGCAAGAAGAAGATGATGAAAATGTCAG
GTACCTGGAGGGAGGCCCATCCCTTGGCTACGTCCGCGCGCTCCGAGTCTGTCTCGCCGA
TCCAGCCCCACAACACGCGTCGCTTCTTTGCCGGGTCATAGAACGTCTTGGATGCGTAGA
ACTTTCCCCAGTCATACCTCAGCCCAATGCCGACATCGGCGTCAGTGTCCAATGGCGTCC
ATGTGTTCTTCACCGCATCGTACCTTCCCAACGCATAGTAGTCGTGCCGGTCATCGTCCG
AGCTCTCCTTCATCACGTGCAAAACATCGCCGCCACCATTGTTGGACGCCGCAGCCACGG
CCTCCGTCATGTCGATGCCCCTCGCGCCGCCGACAGGGTACAAGTCGATGCACTCCCACA
TACCTGTCCCCGGCACGCGATGAAGCAACCCAGGGACAAGCTCATAGTCCATGAAATCCT
TGGTCTTGTAAGTCATCACCATGCCGGCATGACGGTCATCCTTGGAGCCAATGACGAGCC
TCCACATGTCGTCGGAGCCGTCAAACCACGCAGTGGTTGGGTCCCTGAAGTCCTTCTCCC
CAACTCCTGGTGGCGGATACATCACCGGGTTGTTCTCATACTTGGTCCAGTTGACGAGCA
AAGGGTCGGAGGGGTCGGTCGGAAAGGCCAGACACTGGACCTGGACCGACGCGTTTGTGG
AGCCGGTGTAGAGCATGACGATGCGGCCGTCGGGGAGGACAGTGGCAGATCCCGACCAGA
CGCCATTGATGTCGTACCATTGGTCAGGGGACATTGCGACGGGGAGGTGGCGCCACCGGA
GAAGGTCGCGGGAGGCGGCGTGGCCCCAGGCGATCTTGTTGCCCCAGATGGCACCGTCCG
GGTTGTACTGGTAAAAGAGGTGGTACCATCCCTTGTAGTACACGGGACCTGCATTTGCAT
TTCTCTATTAGCAAGGAAATTTTGCAACGAAATCGACATGGTTTCATCGTGGAATCGTCT
CAAAGAGAAGAGATCACTGCAACAACATGCCACTCGAGCATGGCGTTAACACGTACCGTT
GGGATCGTTCATCCAATTCTTCTCGGGCTGGAAGTGGAAGCCGGTGCGCTGCCACTGGAG
CATGGCGTTGCTCCACGGGAACGCGTTGCCGCCGGCGTCGGCACCAAACATGCCGCCGTG
CGCTGCGGCGCCGGACGCCTTCTCCGAGACGCCGGACTCAGGGCCCCTGCTGCTGCTTCT
CATCGTGACCGTGTCGTCCGCCGTAGTCGTGTGGCCGGACATGGCGACGCCTGTGGCTGG
CAGTGGCAGCTGGCCAGCGAACCTGACGCCGGCGAGCGCGGTGACCACGAGGAGCACGGC
TGCCGACGCCGCCAGCAGCGCGGCGCACAACGGGCCGGCACTCCGGCGGGCGTGGCGCAC
CACGGCGGCCTCGGCGTCGTCCGGCAGCGGGGAGTAGGAGCACGGCAGCAGTGCCGGGGT
CGTCGAGCTGCCGTCTCTCGTCTCCATTGACATGGAAGAAATCGATCAGAAACGTAGGGG
AGATGGATTAGAGTGGAAGTGATTTCTCGATTAGCAAGAATCTGTGCGTGTTTGCCGAGG
AGTTCCACCTGTCTTTTATAGCCTACATGCCATCCGTTAACGGCCACCTGGCGTGTCGCC
ATTGGCCGCCGTGGGCCCAGGGTGTCAGCACTAATCATCATACGTCCAAGCCATGCATGT
TATCCAGCTCGGATTATGCGTTGTCGGACTCATTCACTCAGAGCATTTTCAACAGCCACC
TAACCGTCCCGCATTTAAAAACAATTTGTAGGGTAGGAATAACATTCTTTTATGCGTCAC
AGAGCACTGGCTTCACCAGATGCTGAAAAAAAATCACACTCGTCACTCCACCAAAAGCGC
TAAGATTTATAGGGCACAATGTACATTCTACGAAAAAAAATACGTAATAAAAAAGATAAG
AATCTACTCCTTCATCGATAGTTCATCGTAGATAAAAACGTACATAATAAAAAAGATAAG
AAACTACTCCTCGTTGCCTTCCTTCGGCGCGCTGGTGTTCGACTCCTCCGTCGTGATGAA
GCCGTCAGCCCACCGTTCATCGTTCGAGTCCCAACTCGACGCTCCCTTAAGCTCCATATT
GAAGAGTGTGGGTTGCTTCCGCGTACGCCTGTCCTTACGATAGGCAGGTAGCACCGCCCT
CCTTTCTGTCCTTCTTTGCTCGAAGAATGCGCGCTCGTCGAGGACGTCCTGCAGGAACCG
TTGGCGTTATGCCGCCATGGCATGTTCGTCTATCTTAGAGATGCCGAGGCAGCGCTCCCG
CCTTCGGTTCTGGCGACGGTCCTCTTCGGTGACAACCCGTGGGGAAGGCGTCAGCCGCTG
CGTCCATTCCCGCGTCATCACCTCGGATTTTTTTTGTCCTTACGAGGCCGGTTGAGGCGC
AACGCTGTCGTGTCGTACGCGCGGGCAGCCTCATCGGAAATGTGTCGAGGCCGAGGCGCA
TGTCGCCGGAGCGGATCTCGGCGTAGAAGGTGTTGGAGGGACGCGCACGGACACCGGCAT
GAATTTGAACCAAAAGGGTTATGTTCGATTTTGATCATTCGATCCCTGCTGCACGTCACA
TGACATCCACGCCGTGCTGAGTCACCCTCGTCAGGGATACATTCTAGTCAGCAGCCAGTT
GAGCAGGCAACAAGTTCAGGAGAGACCGACCAGTTAGTAGTAGCTTCAGCTCCACATATA
AGTCATCCACAACATCATCTCATGCTAGCACAATAATACAGAGATCTGTTGAAATTAGGA
TGGAGACCTTTGCTCGTTCAAAGCTTTTCTTCCAATTTTCTCTGCTTTGAATGGAACCTA
GCTGCATGCTTCTGGCTGTGGATGACTCCACGTGTCAGCAATCAATCTGGCCCCTGTCCT
CGTCTGCGCCCAGTGGGCAACTACGTGTCCGCACCTGCACTGCTGAGATGGAACGTCTTA
ACATGCCGACTAGGAAATCATTTTGTGACCACATAACGGGAAGAAAACCAACAACATTGG
GTGGGTGATGAATTGATGATCAATA