Contig Data
morexGenes
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Map Locations of contig_51475 (4557 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_51475

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66374 1 951 bp MLOC_66374.1 Available Available LOC_Os08g25080.1, FRAME:-3, EVALUE:2e-12, 13108.m02574 protein expressed protein
MLOC_66373 4 1753 bp MLOC_66373.1 Available Available LOC_Os01g64650.2, FRAME:+3, EVALUE:3e-17, 13101.m06962 protein VAMP-like protein YKT62, putative, expressed





CDS Structure of MLOC_66374






CDS Structure of MLOC_66373






Contig Sequence (4557 bp)

>contig_51475 4557 assembly3_WGSMorex_rbca.fasta
GAGGTACCACCTACCCATCAAGGCTAACATCCCCCTCCTCCTCGTGCTTAGTGGTACTCA
AAGCGCACCTCATGTACTCGATCTTAGTCCTACTAAGTCTAAAACCTTTCGATTCCAAGG
TTTGCCTTCATAACTCCAACTAAGTGTAGACTTCGTCCGACTATCATCGACTAGCACCAC
ATCGTCCGTGAAGAACATACACCATGAGATATCTCCTTGTATATCCCTTGTGACCTCATC
CATCACCAAGGAGAAAAATAAGGGCTCAAAACTGACCCCTGATGCAGTCTAATCTTAATC
AAAAAGTCATCAGGTATGCAGTCTAATCTTAATCAAAAAGTCATCAGGTATCGCCATCAC
TTGTTCAAACACTTGTCACAGCTTTTATCGTATATGTCCTTGATTCATCAGACCTATCAT
TTGCTCAATTCACAAGTGAAACAAATAAAAGGTATTTGGCAACACAATGCAGGCGTTTCA
CTATGTAGTTGTGATTCTGTTACTTGTCTCTCCACGTATACAGTATGTCAAGAAAAATAT
ATAAATGGCCCAAAAAAGGGAAACTGTAGTAAAGAATACAAGGAATAAATGAAGCCGCCA
GTTACATTCTCATCTCGAGGTCAGGGGTAACAGATTTCCTCTTCAATCTGTGTTCTGTTC
GAACCCTGTGGTGCTCAACTGTATCACCTTCATCTTCAACTGTATCACCTTCATCTTCAA
CATCGGGGTCTTTCAGACCCAGGTTCAAATTTAGGTCGGTTCCACCAACAAAATTTCCAG
AATCTCGAACCTCATCTGATGCCTGAAATAGGAAGTGTATGCTCAATTTTTAAAAAAAAA
ATCTCTCTCGATAAAGGATTTCAAATACGAAAAACAAGCATGCAAAATCATGTTTGCAGT
ACAAACTATGAAAAGAGTAGGACTGGAGAATAGAATAGTCTTTTTCCAGATGGATCGGGA
AATGGGCTCTTATCTTGTCCTACTCTTATAAAGGTCTAAGTTGATGGCAGTCCATTCACC
CTCATAAATTACATATTAAGTCGTCAATAAATTAACTATCACAATTATTCAATGTACTAA
ACATATGTGCATATCACGATCTTCGGATTGATCTATATTTTGAGATATTTTCTTATTTAC
AAAAGAATCTAAGCTGATATACACATTTAACCAACTCATACAATAAAAAAACTCCTATAC
AATGCACGAGCCTTTAACTTCTGTAGCAACACACAAGTATTTAACTAGTTACCAAGAGAA
GTATGTTGAGAAGAGCAGGACTACTACATTTACATATATTATCCGGTATCACAAAACTGA
TTAATAGACCAAAACAAAGAAATTTTCAGAAACTTCATATCAATTAAGGACAGTATAACC
GCACCAAATCCCTGCCCTCACAGCGATTTGCGTTTTCGGTCGTCCGTTTTCGTGATCTGA
ACATTTCTGGCCGTCTGATCTCATTTGTACAGCCATCTGTGCCAAGATGTTTAAGCAGTG
ACCCAGCTGTCCTGGCGGGCTGCTGCTCCAGAGGCCGAAACACAGCCCTCTCGTAAACTG
GACCTCTTCAGCCAGCCCATGGCAGCCCATAATCAGAGGGTGGTGCGCTCGTTATTTTTT
TCTGCTCATCCTATCTCGGCAACCGGCTCCGCTCCCGACTTCTAACCTAATCATGTCGCC
CCCACCCGCCACCTTCCCCGCCGCAATCACAGACGACGACCTCGAGCAGATGCGCCCTAC
AGGTCGAGAAGACGAGCAGGAGGACCAGACGACCAGATGGAGCGAAGGCCATGGTAGATG
ACCACATCGCATGCGTGGTGGCGTGGGTGCCAGTCACCGAATCCAGCAAGAGTAGGAAGG
GGGAGAAGCTTCTTTTACTTTCGCACGGCGATCTCACATGGAGTTCCATCCAACTCACCA
CCCAAGGTCGCCGCGGATCTAGCTTGGCAGAGGATAGATGAAGATTACGACGCTTGTCGT
GCTGAAGCCATCGGCCGGAGGCGCGGGGGGCTCCACTCGAGCGCCGGACAGGGCTCCTCA
GTGTTTGTGCTGGCCAACACCACAGACATCAGCCACTTCGGATTCTTCCAGCGCAGCGCT
GCTCAAGAGTTCATCGTCTTCGTCGCGCGCACCGTCGCCCAGCCCGGCCAGCACCAGTTC
GTCCAGCACGAAGATAACCACCCCTCCTCAGATCTGCCTCCTGCAACCACATCCCCGGCT
GCCTCTTTGCCTTCTCACACGTTTCCCTCCTCCCAACTCTGCAGCCGCTCCCTCATCAAG
CTACTTGAGACCGCAGTAACAGGGTGAGCAACGACCACCCCCCCCCCTTCCCCCCCACCA
CCACCACCACCCTTCCCCATCTGCAGTTTCTTTTTTTTTTTTGCCCAGATCTATCTGTTT
GGTTCTTGGTACTGATGGAAATTTATGGATGTTTGTAAATCATGCAGGGCTTCAGATGCT
ATGCCGGATATGCTTAGGTGAATGGAACATTTTGGATGTCTGCACGAATATGTACGCATT
CTCCTTTGTTTATTCGGACTAGCCGATCTGCTTTTGAGGCTGGTAGTACTAGGTTGTAGT
GCAGTGCAGGTAACGATAAAACAAGTGTTAGTACTCAAAATAAGCAATAGATTAGTTGAG
CAGTCCTACATAAACTGGAATTACTAGATCGTACGCTAAAATTACGAGATAAACTCGATA
ACCAACAACAGATTAATTAAAGAGTATCTTTCACTGAATTCAAACAAGAAAAGAGAAGCA
ATAGTCATGGCTTGTTGCTACTACAAAAACATATATATTTATGAGCTTGCCTAGGAATTG
GCTCGCTTGGGACACATCAATGTTGACAGTTCTTTTCTCTTTTACCCGAAATTGAGTGTA
ACCATTTTGCAATTTTGATTGATTGCTATGGACAAGTTGTTGATTAATTTTTTGCACTGC
AGCAGGCAATCTTTTTAGTCAATTTCTTGCCATTCTATTACTAACTTTATTGCTTCCATA
ATATCTCATCAGGACACGCAAGTTGAAATGCATAATTTTGCTCCGAAATCACTCTTTTTC
TATTATAGGTAACCTAGGTCTATCTTCCAACTCCCTATGTTCTACAAATGAATCATTTGA
CTTTCATTTTAGTCGCCTTTGTAAGATATTTGGACTACCAAGGAGATAACCATGTATGCA
TGGTTTGGTTTTACATGTCAAGGCCTCAAGCGTACTAATTACTATACATGTGTTTCTACA
AATGAATTATTTGACCTTCATTTTAGTCGCCTTTGTAAGATATTTGGACAACCAAGGAGA
TAACCATGTATGCATGGTTTGGTTTTACATGTCAAGGCCTCAAGCATACTAATTACTACA
TGTGTTTCTGATAAAAGAATCCAAACATATGCTGATTCAAGTCGTACAATAATCGACGAT
GGGATCCATGCAGTAGAGTAAGCCACCAGGAGAGGCTATGGACCGGAGCGTGGGAGACCG
CCGTTGTTGCTGCCCCTACTCGGTACATTCCTAAATTACCTGATCATAATAATAGTGTTC
TAATTTCAAGAAATATATTGCATTTATATGTTTGTTGTCGTGTCAACATTGAGATACTAT
TCCTGATCTCCAATTATACATTGACTTGTCTTCATGTTAGTCGATGAACGATTTGCTTTT
AATGAGATGTTATGTTTATACCAAAGGTACAAATGCAGACACTATCCTTGCCTATGGGAT
ATGACCTGGGAGTGTGCTTAAGAAGTTTGTCATCCTGTCATATAGTTCATATTAGGGGAT
CGTTAATTAGTATGGCAACAAAAATGATCATGATTATTCTGTCATACTGCCTCTTAAATG
GTCAACATAGATGCACACTGAGTGTACTAATTGCATTATTAAGTTCCCAGTCTTGCTTTA
GTTGCCAGATGATCCTTGGAGATGAGAAATTTTCAGCCCAATTTTGGTTCACTTGCTAGA
TGAATGAGAGATCGAAAAAATAAGCAACTTAGATGCTTTTGTCTGAACCTGCTTTACAAT
TGTATGACTATTTGATAATGTGGTTTAGCATGGTGTACGCATTCTCAAACTGAAATAGAC
CTGCTTCACAATTGAATGATTATTTAAAAATTCTCTAGCTCAAATATGGCAACTTAACTG
ATACTCCCTCAAAGAAATATAAGAGTGTTTAGATCACTAAAATAGTGATCTAGACGCTCT
TATATTTCTTTACAGAGGGAGTACAAGTTATCTAACTATATATTTATCTATAGGAAATTG
AATATTTTGTGCCATGCATATCAACAAACTGCAGGAGTTAGCTAAGGGAAGCTGCATCGA
TTTCTCCCTATAGAAAAATGCATCTATTCTTTGGCATGATGCACCACACTAGCTTATTCA
AGTGCTCGAAGATATCAGCGTATGCCTGAGCTTTGCCTCACATGAAGTCCATCACAACTG
AACACGGTTCAATTTATTTTTGTAACTTAAAACTACTACTCCCTCCGTTCCTAAATATAA
GTCTTTCTAGAGATTCAACTAATGGACTACATACGGATGTATATATAGACATATTTT