Map Locations of contig_51469 (3777 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_51469

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66366 1 1460 bp AK373774 Available Available None





CDS Structure of MLOC_66366






Contig Sequence (3777 bp)

>contig_51469 3777 assembly3_WGSMorex_rbca.fasta
AGGATCCCCGTCCCCTTCCCTCCCCCAGCCGCCGACTACACCGCCCTCATCGGCGACTGG
TACAAGGCCAACCATACCGTAAGCACGACCAGACCAGCGTTTTCTTTTCCTTTTACACAA
GAAGATTTCACTTGAGAGCCCGTTGTTGTTGCGCAGGATTTGAGGTACATGCTTGACAGT
GGCAAGGCTCTTGGCTTCCCTGATGGCCTGCTCATCAACGGTCGCGGCTGGAACGGCTAC
ACCTTCACCGTCCGGCCCGGTAAAAACCAAACATTATGTCTCAACAAAACCTGCACCAAA
AATGAGCGTCTCAACTGAAAAATATGACGTACCGTTGCATTTGCAGGTATGACGTACCGT
TTCCGGATCACCAACGTGGGGCTGGCCACGTCCCTCAACATCAGGTTCCAGGGGCACACC
ATGAAGCTGGTGGAGGTGGAGGGCTCGCACACCATGCAGACCTCATACTCCTCCCTGGAC
GTGCACCTTGGCCAGTCCTACTCGGTGCTCCTCACGGCGGACCAGCCTGCCTTGGACTAC
GCCATCGTCGTCTCCACGCGCTTCACCACCAAGATCATATCCACCACCGCCGTCCTGCAC
TACGCCAACTCCGCCGGCAAGGCTCCCGGACCTCTGCCGGGAGGCCCCACCACCCAGATC
GACTGGTCACTCAACCAGGCCCGCTCTATCAGGTCTTCTTTTCATTCCCACTACAAATAC
AAATTCTTTTTTTTTGAAGGAAAAAAAAGAATTTACTGTAACATGTGATCATGGTGGGTT
GCTGACGTGACTCGCAACCAGATGGAACCTGACGGCGAGCGGGCCGAGGCCCAACCCGCA
GGGCTCGTACCACTACGGCCAGGTGCCCACCACCAGGACCATCAGGCTGGCCAACTCCGC
AGCCACCATCAACGGGAAGCAGAGGTACGCCGTCAACGGCGTGTCGCACGTCAATGCGGA
CACGCCCCTCAAGATCGCCGACTACTACAAGATCCCCGGCGTGTTCTCGGTGGGCACCAT
CTCCGACAGCCCGACGTACGGCGGTGCCTACCTACGGACGTCCGTCATGGGGGCCGACTA
CAGAGGTTACGTCGAGATTGTGTTTGAGAACTCTGAGAACGAGGTGCAGTCGTGGCACAT
CGACGGCTATGCCTTCTGGGTTGTCGGGTATGCATGCCTGTCTCCGTGGCTTTATTTTCG
ACGATCTGAATCCGACCGGGTCTTAATTATTTTTCTTGATGCAGAATGAATGGAGGAAAA
TGGTCGCCGGCAAGCAGGCAGATCTACAACTTGAGGGATGGCGTTTCACGCTACACCGTT
CAGGTATGGATGCTCTGCTTTCTACTTTACTACTCAAAACGCTCGACACCCGGCACATTT
GTTCTCACAGTTTGCGCTCATCACTGAACCTCAAGGCATTGCTTGTGTGCGTTTCCGTCA
GGTTTACCCCAATGCATGGACTGCAATCTACATGCCCCTTGACAACGTGGGCATATGGAA
CGTGAGATCGGAGACCTGGGCAAGGCAGTACCTGGGACAGCAGTTCTACCTCCGAGTCTG
GACGCCGTCCACGTCGTGGCGCGACGAGTTCCCCATCCCCAAGAATGCCCTCCTCTGCGG
CCGAGCCGCCGGACGCCGGACAAGGCCGCTCTGATGACTTGGCCACATGGCCAACCCAAG
TTTGTCATGAGAGGATGACACCTTGGCCTGGAGCACAAATGCTAAAATTACCATGAGACA
AAAAGGCTCACGGAAATTATGACCAGAAACCAGATTCTCGTGCGCTTGCAATTCAACTTT
TAGTAACAGCTTGATTCTTTCTACAGTTGTTTTGGTGGTGGGTATAATTAGTCATGTAGT
AGCATCTTAGCTTTGTTATTCCGATGATTTTAATAAATAAACAACAGTTTTGCTAGAACT
CATCTCGCTAAGTTTTAGCTATATCTCATTCACTTCTATAACCTGATCTCTACTCCTATA
AAAATCTGAGTTGGTGATGATGGTGTGTCTTTCTGGCCGTTCGATCTGCATCTAACGCAC
GTGACACAATCTGTGGCAAATTTGTAAAAAGATGCTCGCCACTTAGTACACATTTGCAAA
TAACCCCACATCTCTCCCATTCACCCCAATCTCTTCCCTATCTCGGAGGAGGCAGAATAG
TCGCTGTCGGTGATGGAAGAGGGCTCGAAGTGGGAGTGGCTTCTTCCTCCCGCAGCCGCC
GCCGCTGCCACCATAATTGTCCTCTCCTCGAGCGCAACAGCAGAACAGGAAGGGAGTCAT
AGCGCCACGAACTTGAGCCCTCCCTTGAGCCAGGATTGGGCAGGGATGGGGGATCCGTCC
AAAGTTGGGTGGTGAAGTCATTTGCTGCACCGGATCCGGCGCGAGATGCCATCTTCTGGA
AGGTCCTCCTCCACATCGTGCAAACTACACCGAGCACCGCCGCCCCTAGATCTGTCTGTG
CCGTCTACCCTACTGTAGCTAACGATGTCATGTCATTTTTATGCTTTTGCAAGTACATAG
TACAAAAATAGCTGGCCTATTGGATTCTTAGGGCCTGTTCGGAGGCTCTTCAGCTCCCCA
CTTCACGAATTTCTGGAGGGGAGCTGAGCCGAACGAGTTTGGTCCAAGAAGCTAGAAGCG
AGAAGCTCGGCCAGCCGCAAGTATAAAAACATGGAGCACCAAAAGCCCAGCTCCACCGAT
TGGAAAAGGAGAACTTCGCCCAAATTACATTGAACTGCCACCGCCAACTGAGGGCAGATC
GAACCCGTACGCTCGGTGGACATATCGATCGATCAAATCGATACCCTATGCTCCTTCTCT
CGCTGAAAAGCCAAGTTGGGCTGCCTCCAACCGGCCCATTATGGCGCTAAGGCAGGCCAC
CCATGCGACCAGCCCATAGTGGCCATGGGAGAAGCCATCGATCGCTGCCGAACGGAGCTG
TCTCGCTGCAAGAAGTGAGAAGCTGACTTCTGAAGCTGATTTTGAGAAGTTTTGGAAGCT
TGGAGAGGATCAGAGTAGGCTCTTAGTGTTCGAGATTCTTTTGAGCAGTTATAATTTGTG
GATGCAACAGCTTAACTTCGAACTAAGCATTCATATGTTCTGTAGTGACTTCCATAATCA
GTATAAGGTTGTCGCTTTTCTGATTCTTCTGTTCCAGATTCTTCAGCAGAGATGTGGCAT
GTTAACATATTCAACAAACTTAAAATATTTGGTGTACATCCAATTTGACATACAAGATAA
GGGTCAAAACATCCACCTTATCTTCCATCTCTTACCTTCTTTCTCTGAATATGCTCACAA
ATTTTAGTGGTCGCTAATTGCTTTTGCTTAAATGTTGAAAAGTTTTCAATTAGGTTCAGA
CCCAGGTACAGAGTTTGTTCCTTTCATGCAGAATACATTATGTGATTAGTCTTGGTTCCA
ATATGGTACGATCAAAGGCCACTACTGCTGCAGATTCGATGCTCATTTTCCACGAGTCAG
ATGGTGGTGGGAGTTGCTCAGGATTTACATGGTGACTGCTAATCTTCCTTGCGGGTTACA
ATTCCAAGATGACACCATGCCGGTCTAACCAGAATGAATGGCTTGTAAGATTAGAAAGGG
GATAATTGATTTTCGTCACGTGTTCTTTTGTTTTCTTTTACTGAAAGAAGATAGAGAAGC
AGAACAATTCATTCCCTTGGATAACAAGAAAACTAATCTGTACATTGGTAGATAATTTTG
ACAGAAGCAAATGTATATTGTTAGCCCAAAGCTATGTGTTCCATAGTTATGCCAAAT