Contig Data
morexGenes
Links



Map Locations of contig_51396 (4168 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51396

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66337 1 1399 bp AK251033.1 Available Available None





CDS Structure of MLOC_66337






Contig Sequence (4168 bp)

>contig_51396 4168 assembly3_WGSMorex_rbca.fasta
CTGCTGTTCCTTGCTGCTTTGCTGCTACTTGTTGCAAGACTTTTCTATAGCCGTTGCGAG
GGAAGAATAGTTCCCCGTCCACGTGCTTTTTACTGACGTCATTGATACAACAGTTAGGAA
TNNNNNGCCGTCAACGGATCGTTTCTGACACCCTTGCTATCATACTACTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNTAATATTTCAGGTGTGGTTGAATTTAACGAATTCAGCTGCTAA
TACTTGAGAATATTATTTCGCTTCCCTTGCATGAACCAACAAATTTGGGTTGAATACTCT
AACCTCAAAAACTATTGCGATCCCATACGCTTGTGAGCCATCATGACCCAACCCTCGTCG
AAGGCCTGGTCGGAGGGCAGCGCGACCGACACGGCGTGACAACACCGGCTCTTGCATGGG
ATTTTAATGCGGGAGCATCGATGGAAGGGACAGGTGGGGTCAATGCGATTAAGAGGTTGA
TTATCTACAAACAAACACATACATAATCACCCACGTGCCGATTCGAGAGTTTTCAACGAG
CGAGGCCGAGAGATGATTTAAAAACCGTGCAATACAGCCCATACGCATGTAAACCAGGCC
CAGAGATGTTTTAAAAACCGTGCGATACAGCCCATACACATGTAAATCAAACAATCAAAT
ATAAGAAAAATGATACTCCCTGTGTCCTAAAATAAGTGTCTCAAGCTTAGTATAATTTTG
TACTAGAGCTAGTATAAAGTTGAGACAGTTATTTTGGGAGTACATTCAACCGACTTTGTT
ACGATTTTATGGGCAACCGTCCTACTAGTAACAATTGATTCGGCCCCAAAAGAAAAAAGT
TTTACAATTTTTTCTCGGAGCACACACGATCTCCGCCAGCTCGAAGTGTGAACACCTGCC
GACGACGAGCCGTGCCCATGGCCCGTGCGCAGCCAGCACTGCCCAGCGCAGCTGTAGCAT
GCTCCCCACCCCCAACTACTTCCGCCGTACCGTCACAACCCCGCCCACGCCCACCGACGA
GCGGGCCCAGCGCTTCCGCGCCCCCACCTGTCGGTACCCGCGTCCGGAAACCAACCGAAA
ACAAACGCAGCAGTAACACCGACAGCGGGAGGCCAGCGATGCGAAATATCCCAGGGGCAG
CTCCGTCCGCTCGGCACGGTGAAATTCAAAAAGTGAAAACGACGGCCGTTCGATCCGGCC
AGCCCGTTTGAGGCGACGCGCGGCGGCCGTCCGATCTAGCCCCTGCCCGGTGGTCCCCCA
TCCTACGGCTATATATATATTTCTCCCTGCCACCGAACACCCCCTCACCCTCCTCCGCCC
ACTCCCAGCCTCGCCTCGCCGCCACACTCCCCACTCCCACTGCGCTGCTCCGTCGAGCCA
GCTCGCTGATCGTAAGTCCTAAGCCGCCGCCTCCTTGAGTTCACTTCCGCCAGTGCCTCG
TGGATCTGATGTGCTGTATGAGTCGGCGCTTTTCCGTGTTTTTTTTCGTTTTCAAATTCG
TTTGAGAACTCGAGGTCGCTTTCGGTGACGAAGTAGGAAACGAGCGTGGATCTGGGGGGT
GTATCCTGTGATTTTGGCCGTGGGATGCGTCGATCTGGTGGTTTTACCTTGTCCTCGAGT
TTGTATGGGGGCAGATTGGATCTGTTTTGCTGGGACTTCCCGTCAGATTCTGTAGTAGAT
CTGAGGCGCGCTTTTAGGGGATCTGGTGGAGGTGACGCGTGTAGATTTGGAACGGATTTA
CTGCTAGTTCGTGCCATGATTCCCCCCACATTAGAGATAGTCTGGAAGCCCGATTTTAGA
GTACATCCTCTTTAGATGTGATTTTGGAGCATTAACCTGATGCCAAGTCAGTAGGGTAGG
CAGTAGCGGGCTATTGGCTTGGTTGCACCGTTCGAACTTTGAATTTACTGTGTAACCGTA
TGTTGTCGTTGTCGTTCTAAATCGTAATCCAGTCATAGGGATTGGTCGTTCATAATGACC
CCAAATAAGTAGTAGATTATTTTATTCAGAAAGCCAGACAACTCAGATCTTGCTTTGTTT
TGAGTAAATCTGGCTGGATCAGTCGTTTCCCACGCCGTACTACTGCAGTATGCGAGTCCT
GCTTACCCGATGTGTTTTATGATTTCAGAGAGAAGATGAGGGAGATCCTCCACATTCAGG
GTGGTCAATGTGGAAACCAGATTGGTTCCAAGTTCTGGGAGGTGGTTTGTGACGAGCATG
GCATCGACCCCACTGGGCGGTATGTCGGCACCTCTGACCTGCAGCTGGAGCGTGTCAATG
TCTACTATAATGAGGCCTCATGCGGCCGCTTTGTGCCCCGGGCTGTTCTTATGGATCTGG
AGCCTGGTACTATGGACAGTGTTCGTACTGGACCATACGGGCAGATCTTCCGCCCTGACA
ACTTCGTGTTTGGGCAGTCTGGTGCTGGTAACAATTGGGCCAAGGGTCATTACACCGAGG
GTGCAGAGCTCATTGACTCTGTTCTTGACGTTGTCAGGAAGGAGGCTGAGAACTGTGACT
GCCTTCAAGGTAACTGAACTTGAATTGAATTATTTCGTATATGCAGATTTGAATTATGTT
GTCACTCGATAAGAAGTTCTAGGCTACAATATGTATTATGCCAGCAATGCTATGCGATGC
TGCTGTGGCATCTTCTGTTTGTATCCTTCTTATTTATAGCCATGATTACTTGTTTGTAAA
TAAGGGTACTGGTTGGAAACCCTACGTACTTGGATAACTTTGTGTATGATCATTCAGAGT
TAGTACTAGGTCTCTGCTTACATTGTTTTGTATTCTTGTCATGGCACTTGTTACTTCCGT
ATCTGGTGAATTATTTCATAGTGCCATCTAGCATAACTAATGATTATGTATCTATGCTGC
TTTCGTAGAATATATTTGGTAGTTTAGCATCTAAGCAGTGGTTATCTATTTATGTTCAGC
ATTACCACTATACACTTCAAATCATTGTTTAGAAGAATCTTTTTATGTTTTCAGGTTTCC
AAGTATGCCACTCTCTTGGTGGTGGTACTGGATCAGGCATGGGGACACTTTTGATATCAA
AGATCAGGGAGGAGTACCCAGACCGCATGATGTTAACATTCTCTGTTTTCCCTTCACCGA
AAGTATCTGATACTGTGGTTGAGCCTTACAATGCCACTCTTTCGGTCCATCAGTTGGTTG
AGAATGCAGATGAGTGCATGGTTCTTGACAACGAGGCCCTTTATGACATCTGTTTCAGGA
CTCTTAAGCTGACCACTCCCAGCTGTAAGTGAAATTTGCACCTTTTTATTGTTATTTTCT
ACAGATGACTTTGAGCATGATGTGTAGTCTAATTTTGAATAATTTTTACTGCATGCTATA
ATATGCTCAATAACACAAATATTCATGCTGAATTTCTATTCACAGCTGGAAAAATGAAAA
ATGACGTAGTTCATTGGCTTACCTTTTTGGATAATATTTCTCCAAGTTATTTCTTTATAG
CAGTTCTGGTTTTCTTAGACATGGTCTGAAACTCTAATTGGACTCTTGTGCTTGAGTTAT
TTGCTCAGGGCTTTCATTTATCTGCACTTCTTCACTATTACACCATTTCAAATACTACAT
TATTATCATTCAAACCTGTCTTGGTTGAGATTTTGCTTATAGGTTGGATATGTGAGAATG
ACTGTTAGTTGTCATGCTAATCTGAAAAAGTGTTTGTGACTATATGTGTTAGTTATTGTT
TCATCCTGGATGCTATTTTTTAATTATGTTGCTTGCTGTGTCTTGACGTTTTTTCCATCG
GTGCTGATTTCTGCAGTTGGAGATTTGAACCATTTGATCTCTGCCACCATGAGTGGAGTG
ACCTGCTGCCTGAGGTTCCCTGGCCAGCTGAACTCCGACCTCCGGAAGCTGGCAGTGAAC
CTGATCCCCTTCCCACGTCTCCACTTCTTCATGGTTGGGTTCGCGCCCCTGACCTCCCGC
GGCTCCCAGATGTACCGCTCCCTCACCGTCCCGGAGCTCACCCAGCAAATGTGGGACTCC
AAGAACATGATGTGCGCCGCGGACCCCCGCCACGGCCGCTACCTCACTGCCTCGGCCATG
TTCCGTGGCAAGATGAGCACCAAGGAGGTGGACGAGCAGATGATCAACGTGCAGCACAAG
AACTCATCCTACTTCGCGGCGTGGATCC