Map Locations of contig_51395 (10803 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_51395

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66336 5 1027 bp AK376548 Available Available None





CDS Structure of MLOC_66336






Contig Sequence (10803 bp)

>contig_51395 10803 assembly3_WGSMorex_rbca.fasta
ATTTTGCAATCTATCTATAGTTGTAAAATGTTGTGCGCGCGCTGCGTTGCTTTTTAACGC
GGCTGCTGGAGCCAGCGCCTATCCCCGCGCTAAACCAAACGAAGCGCGCGTGACAAACAC
ATTTTTTGGACGCGGCGCGAAGCGCGGCTGTTGGAGATGCTCTTACATAGATAAAACAAC
TCATTGTTGAAGATCTTGATGGTCTCCGTTCCCGGCGACAGCGAGACGAGCAAGTGCAAA
AGCTCATGCGATTGTGGAAGCTCCGACCACCTCCTCAGCCTTCGTGTTCAGCGAACAACT
CCTCCGCCGTCGCTTATTCTTGCCGGTTAGCCTCAATGTAGGCCTTGTCCTGTACGGACT
CAAGGATGGCGCTCTGCTCCGTCATTTCCATTGCTGGGGTGTCTTCGTACTTCGCCTCAG
CGTCAGCCATGGCGAAGCCCGCATCCTCCTTCACTTCCTTTGGCTTCGCCACCTCCTCCT
CCTTTATGGGCTCTCGCTCCGGCTCCTCATCCTCCTCCACCCGCTCTTCCTCCTCCTCCT
CCAGCTCCGACAAATTCAAAGGAAGCTTGATGACGAATCCAAAGAAAGCTTGACGGCGAA
TCGTAGAAAGCTCGACGACGAAACGACGAGGATCCAACGCCTCGACATCACAAAAGGTAG
AAGGGGGTGGAAGTGTTGGTGACGAAGAGGAGAAATGGGGCGAAATGGAATGAGCTAGGG
TTCTGTTTTCGCCTTCTCACTTAAATAACTAGCTTCCTCCCTCGGGCGGCACACTAAAGT
AGCCTCACGCAACGCACGGAGGAGGAGGCGCCCGTCAAACCATTGGTCTCTTCACGTCCC
CGCATGGGCCCCATGCGTTAGTCCGATGTGTCGGGCAAGCCCGGGCGCGTTCGAGCTTCC
TCATATCCGCCTCAGATTTGAATCAGACATAAGGAATGCTGGACAGTTTGCATGTTTGAA
CCAATTATGAGGATGCTAGTTGAATGGTGTTTTTTGTGTCCGGACACTGATCGGACAACC
TGTCTAGACGTTTTGAGCGGGCACGGGTCCGGTTTGAAGCAATCGTTTCATCATCCGTGT
TTGCTAAGGCACGTATAGATGTGCTTGAAGTATTGCACACTTAAATAATATATCATTAAT
TTTACATGAAGATTCGAACGAGTATTTGATTTTTTTTATATGTTGATTGAGTCATTTAGA
AGTGTATAAATATTTAGGACACATATAGATGTGCCTGGACAGACCCTGTCAAAACTACCT
GCCAAAACCACCGTGCGAGGGCGATGCAAAATCTCCGGACAGAGAGACGGACACAATCGA
CCCAACGAGCACGAGCAGGAGCCGCCTCGGACGCACGCAGAAACAGCAGCAGTCAACCTG
GGTGCCGCACGCGCGCCCCCACACCTGCTCCGCTATCGGTCCCACCGAGAAACGCCCCTC
GTGTCGTGTGCCGGCTCCTCCGTTTTGACCGCCCGCACCTTGACCCTCGACGCCGAGACC
CCGCCTCCACGCGCGGCGGTGGCACGGGACGAGACGGGACGCAACCTACGATGGGTCCGT
CCGAGCCGTGCGGGCGGCAGGAGAGCGACGGCGGAAGCTTCCGAGCCGAGCCGAGCCGTG
CGTGCATGTGCCGCACGTTTTCCGGGTGTTCTTCGGTGTCGTCGATGATTGGGTCTGGGT
GGGTGTTTCTTTACACGGACTTCGTTTCGTCCGTGTCATGCATCGTGACCGCCGGGGTCA
GAAGGAGCACTTGGGTATCCACGGAGGTTTGTTAGATACACACACAAGCGGACAATTATG
GTTGGCTTCATCTGCACATGTAAGCTCGTGTCGTACATATGATTAACGCCCACACAAACC
ATCCGATAGTTATAAAAAATCAATCTACATGGATTTTTTAAACGAGACGGATCGGCACCT
TTCATATCCCGCCTAAATATGAGACGGATATGGAGAAGCCCGAGCGCGTTCGGACACGCC
TGGCCCGTATCGACCCTATGTATATCCGTCTCCATTCACTCGTTACACAAAACTCTAACC
ACTTCATTTCACTCTCGTCCGTCATCCAAGCTCACCTTCGACGATCTCGGTCCTTCTCTG
ATATGGCGGGCAACGGATCCGAGTCTTCCATCTCCAGATCCGTCGACCACGAGCACGTCC
CACGCGGCCCCGAGGAGGAGATGGATGTCCGGCTTGCGCCCTGCCGTTCTCAGAAGGCGG
ACACCCTTCGGCAGCACTCCGAATCATAGGGTCGAGAATCCATTGGGTCGGCACAGCCAG
TGCCTAGATCCGACGTCATTGCCTCATCGGAGGTGGTGCAGTCTGTCTGGCCTTCGAACG
TTGTGGCGGACGCGCAACCCCTCTGTTGGCGCGTCGAGGACGCGCCTTGGGCGTCCTCGG
ACGCTAACATGATGTGGCGTGCCCGTCGTGCGAGGCAGCGGGTGCAGGAGGCGGCGAAGG
CCCTCGCGACGGTGGACGTTGGAGAGGCGGAGTCGCACTCTCCAGCGCCCCATATAATGC
ACACGTGCGGGCGGTGCAACCGCATCGTGGTCAACATCGTCTCCTCCCAGAAAGGATCCG
TCATCGACCTGACGTCCACCGGCACCGTCCGAGTCACGGGCTCCGACGAGGAAGAGTGGG
GCATGGGAGACGACGGGAGTTCGACTCCGTGAGCCGACTAGTGTCCTATGTCCTACTCTA
CCTCGTCGACGACCATACTGACACTACGAGGGGCGCAGCCGACCGCCGGATATGGGCACG
ATGTAGCTGGACGAGCTCCGCTTGTGTTAGACTTACATTGAATGTAATAATATGGATTTG
AAGTTTCTAATTTGAGGTGACCAGTTGTAGAATGCATTATTTGAGGTATGGCTAGTCTGT
GTCCGCGAACGTTTGAAGGACCGGATTTACAAGTTGCGGCTATAGATGCTCTTAAAGACA
TCGAGCTTTCGTGTCACCCCCGCTTGTGCTCCACTCTTTTAAGACATCCTTGTTTTGTCA
TCTAAACATGAATCTATTTTATTTGTGAAAATGGTTCACATGATTTTATTTTGACAAACT
GATAGCAAACTGGAGGCTTTACGCGTGTTTGGATGCAAGCATGTGATAACTTTGATCCAC
CCAAAACCCCTCGCCGATCCAAAGCAGATGCGATCACTCACTCGTGCCGACATTCGAGCG
ATGCAATGACCGAGAGCATCGACCGTTGCGCACACATTCTCTCCGCATTGAAACAACATT
CACCTATCCGTCTACCTTCACTAAACCAATGTGTGTGTGTCAATGAACCTACTTCGGCGC
CCCAACCGCCACACGACTATCACCCCCTATTAAAGTGTGGCCAGACGTCGGGCAAGAACT
ACACGACCACACCTCTACCCTCCATCTCCTCATTGCACCATACCCTCGTGGATTTCCAAA
GCCCTCTCGGAAAACCTCTCGTCCGATCAGAAGAAGAAAATCGTTGGCATTGCAGCCGGC
TTGGTGGCCCGACGAGCTAACACGATACAATCTTGTTTGCTGGCAAGCTCTTCGGATCCG
ACGTCTAAGCCTCCGTCATCGCCATACCATCCTCACCTGTCTAGGCTGGCCAACATTAAT
TGTCTCCCGACAAATCAGACCTGTGCGATAACGACAACACGTCCGACAGGCGAAGACAAG
AGCCATGTTCATGGAGGTCGACACGACGGGGCCGACGACAACGTCGCTAACTCCACGTCA
GCCACGCCCGTCACCGCCGCCAACATCGAGGAAAAGTAGACCATGAGAGACCACCTCAAC
TTGGGTCCGAGGAAGGCCACCTCTATCGCCTAGCCGACCTACACAACCGATGTCTTGCCC
GCTTGGCGGGGCGTATGCCACGGTGACCGTCTTCCTCCGTCCCTAATCTGTGCTTCACGG
AAGCAGAGGCTATTATTCCCCTTCCGTTGAAGCATGTCCCTTCAAGGCTCATGGCGGTCC
GATGAGCTTGCTAGCGTACATGAGGAAGACATATCATGGGAATGAGGCTCCGCCACGCCC
GACAATAGACTAGTTTGGAATAGCATAGCCTAATTCGCTATAGTTTAGTTGAAATATGTC
GGAAATGTAAATATTTTTGTTTGATTTATATGGAAATCATTAGGTTTGTATAAATTTTGT
TTGATTCGTTCGGATCCGCCTTGAAATGTATGCAGTTATAATTGGATGGTCGGCACCCCC
ATTTGTGTCTACGTACTGGTCCTTTCCTGTCCGTGGACGGATGCGGTGTTCGCTTTGAGA
GTCGATGTTGGAGATGCCCTTACATATGTTTCCTAATTTACAATTACAATAATATGGGCT
TCAACGGTTGAATACACTTTCAAGTGTGTGTTTACTATCCGGCTCTGCGTTTTGTGACCA
ACAAGCTTCATCTTGTGGGCTTTGACACATCTTTATGGCATTTGGACAACTTCAAAAACA
TTTGGTGGATTAATCGCTCCGGAGTGGGCACTATCCATAGAAAGGCAATGACCTTGGTGG
CGACGGAGTCAGTCATGTGTCAGATAATTCTTAGGAGCAGTAGTGATAAGTGGGAATAGT
CAGGTGTCAGATAACTCTTAGGAGCACTGGTGATAAGTGGGGGCAGGAACACTGATGGAT
TTTATTTTTGGTGGTACTCTTCGGGGTGTGGAGTCGTGACTTTCAGGATGAAAGCCTAAG
ATCCGATCTTCATTGGTTGTGTGTGGCGATTGCCTTCCTGAAAAAATTATTTTAAAAGCG
CGGACTTTTTTAAAATGAAAACCTAAGATCTTAGATCGGACAACGATGACGCTTGTATAT
TGTTTCCTTTTAAGACGTTGCTTGTAAAGGCTTTTTATGTCTTCTAGGTGTCGTATTAGG
TGATTGTATGTGTGTTGCTGTTGAGAAGAAGTCGGCCGTTGTGACCAAACCTTTCTTTTT
TATTTTCTAATTTGGTCGTGTGCATTCTGAATGTCTTTGTAACATTTTATAGGTATAAAA
TTTAAATGCAATTGGTATCTTTAAGATATTAATTTATTCTTCTTTAAAAAAATGCATATA
ATCTTGTCGTCGTCAACCCTACCGAAGAACGTGGTTGCCAGCACACTTGGATGAAGGTAC
ATGCACTCATGTGCGTACGTGCCAATCTTTGCTCTGACGGGAGAGGTAAAGAAAGAAACC
GGCCCGGCTCTGCCCAACCCTAGGACAACGAGCACAGTACCTATAAACGGGGCTCTGCCC
AACCCACAGTACGTGCATACATACATTTCCCCGTAGAAAGTTCGTCTCGGCACCATCGGG
TATCGACGGAGAGACGTCGAGAATGTCGGCATAGGCAGGAGTTCGTGTGGTCGACGATCG
ACCATCATATTCATACGGCCGAACATGCTCTGCCGATCTGCCCAACCTATAACACATTTC
CCAGTAGATGATGGTAGCTCGTCAGCATAGCGGTGTCGAAGAACACATGCTAGATATCTT
CAGCCGCGTCCTTAACAGACTCTTCCAGTGCGTATTTTATTGTCGATCCTAAAAAAATCG
TCCTAGTCATGTCCTCAGGACGTTGATTTTTGCCGGTTGGACCCCATTTTAAACCCGGCG
ATCTCAGGCCGAACCCGGCGCTAGGGGCGTTTGGAGGGCTCCGGCGGAAGGGAAAACGAT
GTGTGGGCCGTCAATGTCAGGCAAAAAACGATTTTTCACCTCCAGATTCGCCCCCCTCGC
GCACTACACCTTTCGCCGTCGTGTCGACCCCGGCGCCGTCCACCTACCTACCGCCGCTAC
AAAGGCCATCTCCTCGGCGACAAAGGGAGGGTTCGTCGCGGCTTCGCCCCCTGCTTCTTG
GCGAGTTTTTTTGGTGCTCCGGCCACGCACGTGGTTGTGCGTCTGCCACGCCAGCCAGGT
GCTCGACGATTTGCCTCGACATCGATGGACTCCGACGACGAGGAGGCGTTCGCGGCGTTA
ATGGATGAGGAAGCCGATGCCGACGCACAGAATGAACAACACCTCATGGTCCTCGCCCCT
CCACACCAACTACTTCGCCGGCGCGCCTCTGCACGACGACAGAGTATTTCAAAGCCGTTA
TCGGATGAGCCGGAAACTCTTCATCGACATTGTGAATTCCATCAGGGAGTTCGACAACTA
CTTCATGTGCAAAAAGGATTGCACCGGCACACTTGGATTCACCTCACTCCAGAAGTGCAC
GACAGCTATNNNNATGCTTGCATACGGAGCTCCCGGTGATATTTTAAAAGACTATGGTTG
CATAGCCGAGTCCACCATCATTGAGTGTTTGTACAAGTTCTGNNNNNNNNTGGTGGCAGT
GTTTGGACCTCAATACTTGCGATCATCCAATGCCGAAGACACTGCTCAGATCCTAGCACA
GAATGCAGCAAGATGATTTGCAGTGGTTACACATAACCTCTAGATTTGGCACTCCTTCTT
TGGTATGCCAAGAACTCACAATGACATCAACGTACTGCATTGCTCGAATGTCTTTGTCAA
GCTTTTTGAAGGCCATGCTCCTCCGGTTAACTACGAGGTCGGTGAGCACCACTACAACAA
GAAATACTACCTAGCAGATGGCATCTATCTGAGTTGATCCATATTTGTGAAGACTATCTC
AAATCCTGCGCGAGGAGGCAAAAACTCCTACTTTACCAAGCGTCAAGAAGCTTGTATGAA
GGATGTCGAGCGGGCATTGAGTGTGCTCCAATCTCAATTTGTTGTTTTCCGGTACCCCAC
TCAGACCTGGTCGAAAGATCAAATGTGGGAAGTCATGACTTGCTGTGTCATCTTGTACAA
CATGCCATGGTCATTGAGAGCGAGCAGAAAGAGCGAGTGTTTGACACTGAACCATATTAC
AGGCAAGGTCCTCTTGCCCAAGTTGATCACCAGCTATCGGTAACCTGGACTGCCTTCTTC
AACATGCGTCAGAAGACCCGAGATCCACATGTGCATCAACAAGTGCACGACAATTTGGTG
GAGCGTCTATGAAGGCTCAAGGGCAACGCCTAGCTCAATCTGTGATGAATTATGAGTTTT
TATTTGTTGAACTATTTTTTATTTGTATTGAGTTTTGTGATGAACTATGCGATAAAAAAG
AATAAAAGATCTGTTCAATTTGTATCGTGAGTCAAAATTAATTTTATTTTAGTCAAAAAT
GGGTTAATTTACGTTAAAAGTAGGTCAATTTGCATCGAAAATGGACCGAAATCGCCGGTT
AAGGAATGACCTTGGGGATGGCTGGGAACCCGAGTCCCCATGCCGACTTTTCCACCGATG
CGCCCGCAACGCTATTTCACGTTCATAGGAGCCCGAACGGTCGGGGATGCTCTTAATCAC
GTCGGTACGGGAGCTTCTGTGGTCGACCATCATACGGGACCATCCTACATTCCCACTGTC
GACTTGCTATGGCTATATACTATGCCTATGCCCCTATCCCTATGTCGTCTCCTTTAGACG
TGCCGGCAATAATACCAGGCAAATCTCCAAAAGCTGGCCGCGTCCTACTTGACGATTTGA
CTTGATTATCGCCGAACCAGATAGCCCATCTCATCTCATCTCCCGTGCAGTGTCCCTATG
TACGTACGTGCAGCTGGGCGCACGCACAAGTGCGTAGAAATGAGGTGGTGGAGATGGCAG
TACTAACAACACTAGCAAAGCCTCTTTTTTGGACATAAGGAAAACCGTATGAAATCAAGA
GGATTTGAATTCCTATATGCAGACGAAAAATATGACCATGGCGCCGTTTGGAAGGGGCGA
GGAAATAGCTCATCGGCAATGTTTCGAACCTCCAGTCAGTCTCTACATGATTTTTCTGCT
CTCTTCTCCACGCCTCAAATAAAATCCTTGTAATATTCAGAAGATTTTCCTTTTTGAAGA
CTTCATGTGCCTTTTACTTTCTATGGAAACATGGCAGCGAATTCCGTGCTTCCTTTTATT
ACTCCTATATACTCCCTCCGTTCCTAAATTGTTGTCTTATAGATTGTTCATAAATGCTTT
TATCCCTGAGCCGCGCAAACAAAGACAGTGCCAGTGCAGTTCTTCTATAATAGTACATCT
ATTATAGATCCACATGTGCCTTTTTTGCGAGGCCCTCAAATAAACATATTGTTTTATGAA
ATCTTACAGGTACGTAGCGACTAGTGAGAGTCGATATACGCTTGTGCAAACTCTTTTTCT
AACAGGACTGAGCAAGATTTCATGTTTCATGGAGTACTTCAAATTGCTGCATTACATATT
TACATGTGCTCATTTACAGCTAACAAACAGACATTCTTACTCTCTTTTTGTAACAGAATC
TAATCTCTCATTTGGTACTGTACATCAACGTACAACCGTGTACTGATCTTCACTTCTTTG
GACGTTCAAATCTTCACACGATGCCGCAATCTTCTCCTAGTTACCTGCCTCGGCATAATG
TTTCAATTGATAGACCCAATCCGGGGACATAAGCTAAGGCACACCTATGGAGGAATTCTC
TGATTGAGGAATGTCATGTATTTTCTCCCTGGTTGATTGACGTCTGAGCTTTGTGCGGTT
CTTCTGCAGTTCCATGTTGGACACCCTCTCGGCCTCAAGCGCTCGCTCAAGCTGTCAAGT
ACACACGTGAACGAGGTGATGATAGCGAAATGCTTCTGTAAAACCAACATCAGGTTCTAT
CATATTCATTCATGATTACCTTTGCTGCTCGAGTGCTCCATTCACCAAGGATAGCTCGTA
GTCTCTCGTTTTCTTCGACATACTGCATTTTAACATGTTCACCATCAACAAATAATGCTT
TGCTTCCTCTTACAATGAATCATAAACATTTTGCCAGAACTGACTCAGAACTATTACACG
ACTACCAGAAAATTTGCAGACAGACACACAAAACAGAACAGTAACATACTTGATTGTTGT
TCCCACGAATGTGCTGGATCTCTGAGTCCTTCTCAGCAATCAAACCACGAGCAAGACGAA
GCTCTGAATGCACTTGATTCATCTAAATGATAGATGAGCAAAATATTAGTCCATGATGGA
GTATTTAACAGAAAAGTATGATCTACATATCCTTAAGCTAACGAAGAATAGCTCGAGTAT
TCTTGTTCGCCCAGCACTGTACTTATCCAAGTCGAAGTCTGGGTAACATTTAGAGTATGA
ACAGAGGCAGAAAGAGCAAATTATCCACCAAGTATATCCTACAGATTGGTCTGACACAAG
TGGTCGAACACACTGACACTCAACAACCAGCCTCACCATTTACTTAGTTCAGAAATAACT
GCTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTTCACCACAGACTACATACG
GATGTATATAGGCATACTTTAGAGAGTGGATTCGCTCATTTTGCTCCGTATGTAGTCCGT
AGTAAAATCTCTAAAAAGACCATTTAGGAACGGAGGGGGCACTTCACAGTTACGAAAATA
AAGTGATGTAGAAAAGGTACTTCAAACACACCAAATATTTTTAGGTGTTGATGCCACTTC
TGCCGTATGCGTAGTGAGCAATATCTGGTTGACCGAGAGTAATTACCTCAGCAGATAGTG
CACGAAGTTCTTGATCACGAGATGCCAAAAGATGAGTAAGATCAACCTGGCGAAATATGA
TGAGAAAGATAAAAACTAAATCATGGTGCACTGATTCATCCAACATTAAGCAGGTTGATT
TACAAATAATTAACATTACACAGTTTTTAGTCTGCTTAAGCATTAAGATGGGAGGGAAAG
GTTTGGCGGTAGATTTAATATGAACCTGAGGAGTGCTTGCAGCAACACTTCTATGGTACT
TACTTAAGCTTTCCTGCAACCTAAGCACCTGACGTAGAAAAAAAAACATTAATCAATCAG
CGCAACACCACTATTCTAATACTAGCATAAATTAGAATTTGTTCGTTGTGTGTAATGCAT
TGACTATTCTACTTTGTAATGACACCACGTACAAAATGTCAAAACTTATTACGACACATG
CCATTAACCACTTTCTGCAACGGTGTGCTGTGCCCAGCCAGTATCTAGAAAGAAAAAAGG
GGTGATCAATGATGCCAAATGAGTAACAGTCTTAATGACAACACATGTATATTGTAAGGA
CAACAGTTGAAAATCTTTGTCTTTAATGATATTATCGTATCTACTACAGTACTATTATGT
GATAATAACATAATCAAGGAAAATAAACATGGCCAGTAAATGCAGTTGCTAATCAAGTAC
ATGAAAAAAAACAGAATTATTCCAAGTACCTCTTCACTCAGATAATGAATATTCTCCCTC
TGGTACTGGAGCAGTGCCATTTGTTGATCAGACAGACGAGAATCATAGTACCTGCAAATA
TATTATTATATCAACCCAAAAAGCTCAAATGACAGGAATGTTAAATGATTTCATGAAGAA
AGTTCACTGATGGCTACACGCTTTCAAAATGGCATTGGTTTCTAATTTTTTATATTCAAA
ACATTACCACAAAGCTCCTCTTCTCTACGAGACTATACCCTACATTATCATAAAAGCAAA
CACACAATAATTGGGTCTGGTGGTACTCAGTGAAAGAACAGACAGTTGTACATGCAAAGA
TAGGAGTATACTTGTATGAAGCAATTTTTAGATATTAAAACATATATGTTTTTACTAAAA
AGGAAAAGCATTTGCATACGCAGTTAGTATTTGCCAGCATAATTAGGTAAACCATATCAA
GTCCATGTGATAGTATATTGTACTCCCTCCGTTCCTAAATATAAGACCTTTTAGATATTG
TACTATAAACTACATACGGNNNNNNNNNNACATATTTTAGAGTGTACATTCACTTATTTT
GTT