morexGenes - Barley RNA-seq Database

Contig contig_51382
Source Contig contig_51382
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_51382 (7653 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_51382

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_66326	1	1366 bp	MLOC_66326.1	Available	Available	LOC_Os07g36910.2, FRAME:+2, EVALUE:2e-43, 13107.m03791 protein OsFBX254 - F-box domain containing protein, expressed
MLOC_66328	1	234 bp	MLOC_66328.1	Available	Available	None
MLOC_66327	5	3247 bp	AK367852	Available	Available	None
CDS Structure of MLOC_66326

CDS Structure of MLOC_66328

CDS Structure of MLOC_66327

Contig Sequence (7653 bp)

>contig_51382 7653 assembly3_WGSMorex_rbca.fasta
CTCCTTCCTCCCCTCCCGCGAGCAGCGCTGGCGCCGCTGCGACTTCCGCGACGGCCGCGC
CCTTCTCTGCGTCCACACCGACGGCCGTGCCATGGTCAGGGACGTCGCCGTCTGTGACCC
GCTGCACCGGCGCTACCTCCTGCTACCTCCCGTCCCCCAGGACCTGTCCGATCTGGTCAA
TCACTTGGACCCTTTCCTTGCTCCTGCCGTCAGAGACGAGGGCGCAGACACTGCTGCGGA
CGCTCCCTTCAGATTCAGAGTCATGTGCTTGGCCAAATGCCAGACCAACTTGGTCCTCTA
CGTCTACTCTTCATCAGGTCCCCATGCCGGGCAATGGCGCACCGTCACATTTGATGGTTG
GACCGCTCTCCTCGCGGGAGCCAGTGACCATGCGCAATCCTCTGCTGCGTTCGGAAAGTG
CTACTACGCGCACGGGTCCTTCTGTTGGGCGATATGTGCCATCAACAAGTTGCTCTTGCT
CGACACGGCTACCATGGAGTTCTCCTCCGTCAACCTTGATCCTGACCTCATGAATCACGA
GGTGGCCTTTGTGGAAGCAAGCGAAGGGAGGCTTGGGATGTTCGCTCTCAGCCAACTTCC
CATACACTTTGTGCCTCGCCTCCGGTATTCCATTTTGGTTACCACTGGGGATGATCCAGG
GCAGTGGCAAAAGAAAGAGGTAGTCACATTGTCCCATGATTACTGCTACCAGATCGTTGG
TGTAGCTGGGGGGTACCTGCTGCTATATGTGGTTACAGACGACCCGGATTCGTTCCCTCC
GAATAAAGTGCCTGACGCGGGCTGCTTTTCACTGAATCTTCGCACTATGGATCTTGAGCG
CTTCTCTCGGGGTAGGGACATAATATCAGCGCGGAACCAACTGTATTCGGGCTTCCCGCC
GTACTTGTCTCCACCAACCATTTGAAAGGGTAAGCTTGCTCCTAGTTTTTGCCTCTATTG
TTGTTCATATGAAATATAGAGGGTCGACATTGCTATATGATGCAAGTATTAGTTAGTTTG
GTGTTACTCTGCTTTGCCATTCTGCTAATCTTAGCAAACAATCCTCACTACAGAGGGGCT
GTCCAAGTTATGTCATGTGCATTGTAATCCTCGGTTACCTATTGGCATTTAGATCATATT
CTGATGGTTAATTTATAGTAAAAGTATGCTAATAGAATTATATTATGGGACGAAGGGAGT
ACCTTTGTAGCTAGATAAGATTGTGTAAAGACTGAGTATATATCGCGGCATTAGTAGCAG
CAAGCACCATCTTTCATGATCAACAATAACACTTGGCAACCATCTATCTCTGAATGCTGT
TGTGCTTTGTTGTGCTCGCCATGTCTGATGAATGCTCATTGGGATTCTGGTAGTGTGAGA
CTCACGGTTCAGTTTTTATATAAGAAGAAAATGGTGCTCACCACCACTAATAATGATATG
ATACGTCGTGTCCTATGCATGACAGCAGTTTATGCGTTGATGGTGGATTCCTATTTTGCG
TGTCCTCGTGCATCTACTCTCTCCGTTCCTAAATATAAGTGTTTTTAGAGATTTCACTAA
AGGACTACATACGGAGCAAAATGAGTGAATCTATACTCTAAATCATGTTTATATACATCC
GTATGTAGTCTTCTAGTAAAATCTCTAAAATGACTTATATTTAGAAACTGAGGGAGTATT
TTGCATGTCCTATGCATGGTTGATTTACTGGGGTAGAGAAGTTTGAAGCACCAAACGAAT
TTTCATCAGCACAATATATGAATGTGTCCTGTTTGAGTATCTGAAATATATATTTTCGTT
GCGTCTGATTAACTAGAGTGGTTGGTTTCTGACCACACACTATTATCATCGTTGTAGGGC
TTAATCTGCTGGGTACAGGACCAATTGACTCTGTCTGGACTGTTAGTGACTTGATCCATG
TCATAGTGCCAAGCCGGCCGGTAATTGATGGAGTGCCTAGCAGCAGCAGCAATGGTGATT
AAGTTGCTTCGTTCCTCTTATTTGGTGGACTGGATGGAACCATGTATGCTTATGTATGCA
CATCGTGTTAATTCTGGTTAGCACGTGTAAGTGTCCTGTTGTTCCGTTAACTTGTATGTT
TCATTTCATCTTGACGCTCAGTAATGTACTAACAGTGTACTCATGGCCCACATCAGGGAG
AAGAGATCTTCTTTCCAATCTTTATTATCCTTTTTGCGGGAAAGGAGACCTCTTCCTTCC
CCTGCGCCTATTGCTATTGACAAGAATGCGAGGTTTATAGACTGGACCACACCTGTAACG
AGTTGGAGTAAATGTTGATTCTGAAGAAATACAAAGCTTCTTTTTTGTTATACTGGACTA
GTTGATTTCTCATCACATGCTATCATTGCATTGCATTGCACATGGGACTTTATTTTGCGT
ATGAGTGCATCGCCTGCATGGATATTGCCGATGGGATGGTCGCCGCTCTCACCCCAGCTT
GAGCTTCCATGGTGTTCAAGGACGATGAATAATGGACAAGCTCCTCCATGGCGCCAAGGC
TCTGTACAAGTTCCATGCGCAGCAGATCGTGCGATACAGGGAAGTTTGGAAGAAGACCAT
CTTCTCAACGGTTCAACCAATATTCGCAAATCCTCCTCCACCACCACCAACTTGGGAACC
CACATTCTAATAAGGCATCAACTAGATAGATGCTGCGCAGAGGCCACAGACAGCAAGGAG
ACGGCATCGGCTTACAGAGCTTCTCATTTCTGTTACTTGCATGCCTGCCTGATGAATTGA
TGATCAGTATCAAACCAAATCATCTGTCAAACACGGACTGGAACTTGCATACGACTTCAG
AAACCAATCCTGGGATCCTTGCTCATATGTAAAGCTCATGTGCAAAGGTTCTTCTCCTTC
CTGCTGATGCTAATCCCTTCAATTCTAGTTTTACAGGAGCAACCTCCTCGTCAAAGCGAA
GGATTTCTGTAACCAAACCTTGATGCATTCAGCCTGCTTCATGTTATTTCACTCATCTAT
GTCTTCAGTCCTAACACGGCGCAGGCCTAGCTAGTGGCACTCCCCAAGAAATGCCAGCTC
GTTACAGCCATCGTCCATGGTAGCTAAGCTCTTATATGCACGACGACAGCGCTCCCCGTA
CCATCTTGTTGTTGCTCTCTACATGCAGGACGTCTTGGAACAGTCTCTTTGCCTGCTCCA
GCAGCCTTTATCTTCTCCTTGTTATTCCGAGACTGCAATAGGGATCGCTGCTGCCCCATC
CGTAGAGAGCTGCAACGCCACATCACTTGCACGTGAGCGTCATACATAACAAACAACCAG
AGGTAGGAAATGAAGCATCCATGTTAAAACTTGTAGGGAAAATCAGGCTAAAAAACAGAG
CAGCATCGTACCTTCTGGGGCATAAGTGTTGCTTTTGGATAACATGGCATCAAACTTATC
GATTGCGGGCAGTGCAGCAAAACACACCCGATCAGCATCAACCGCTGCTTCCTGCTTCAT
CTTTTTTTCACGACAAGTGCAGCTGGATTACCAGGTAAGTGATCACAGCAACACACCCAA
GAAAGTGATCATGTACTAACCTCGGTCCAGTAAAACGAGAATTATCAGTAGACTGCTCCT
GCTGATCACTGAGGGCCTGCATGACGCCATATCGTTCACATTGTTCTGCCAAACAATCCG
CCTTACAACTGACTTAACCATGTCGTGGCTTATTGTCAAGATGGCACAGTAGACTATGAG
ACAAGCTTTTTTTTCTTTCTAGTATAAATAATTATTTTGCTAAAATAACTGCACATACAT
ATATGCATTGTCACTATACAACCTCGGTGATTGGAGAATCGAATTAAGATTACAAGATAC
TGTGTCAGTCACTGGTGGTATAAGGGTTCTTGCTCAGTCTCTCCATGTATTAGCGACGCC
GTTCCCACTTGTTCTTCTAGCTCTTGAGGGCAGAGTGGTGTGTGTAAGTCAGCAAAAGAG
TAACTGTTTTGCTATGAGGCCCACATGATCTCGGCTCCAACCGCCATGATGAATGTGGAC
GCATCCACCCATGTATTGTGGGCCTTGTATCATCATGTCAGATAATAATTCTTCCAAAGT
AATCAGGCGTCAAAAGGATCCATCCACTCGTCATCCTCCCTCACGGCTTTTTCCCACCGT
TCTTTGAACATCTCCAACTCAGCTGACGATTGTCTTCTAATCTGTTGATTGAAATAAGAG
GAGTGCAATTAACGTTACAAAATATGTAGGAGAAACATATTGATTTAGGTTTAGAGGGAA
GAGAACATATGTTATACTCACGTGTGTCCGCAAATCCATAGATCTTCGAGGTAACTGCAG
CAAGAAGGAAATTGATGATCAGATGATAATACTGGTAGTTATCTTGCAGGCATCGATAAA
TCAAGGCTAAAAGGATGACCATTAAAGTTAGATATCTGAACTGATACCCCATTATCATAT
TAAAAGATCCAATCTGTGTGTTGGTTAGTTGCAATTTAGATGTTGTAACCTTAGAGATGA
ATCCGGAAACAATAGTCATTTTTTCTCTCTGTAAGTTTATTTCAAATCACATTGTAAACA
TTTACGGCATTTTACAAAAAATATGACGACAAACAGACCTTGCTAGTATCTGACGGTCCT
CCTAATGATGGTATCCCTTGATGGACGACATACTCACTGTCAATTACACCGACCTTCTCA
GCTCGATCACCCTGAAATCACATACCACTACATGCATCAGTATTTTGGTTACTTATCATT
CCTACAAACTCATCCCTAATAAAGCATTAATCTTAATCTGGCAGGTGATAGTTAAAACAC
CAGAAATAATTAAGCTGCAAAGTGTCAGAAGAACACATCGCAACAAAAATAATGCAAAAC
AAGACAGAAGCCATTAGTACTATCAGCTAGAGGACTAAAAGCCATGCTGTAATTGTGAGC
CCATAAATCTAATCCTTGTGTTAGCATATGTATAGCTAAGTTTGATCCATAGGTGTCAAA
CACTGAACACAGAGTAATCTTCCTAGAGCATACTAACAAGCTACACATTTATACTAAAAA
ATAGACAGCTCATAAAATGAAGTAACATAGCACGGCACACTTGAAATGCGAAAAAAAGAA
GTGAAATAGGTTGTAAAGCTTGAATAGAGCAAAGCGTCATGGGGTTTGAACTATCTTAAG
TACCTGAGCACAATAACCAAGCTTCATGTCAAGGCCCCATCCATGAATCAAGTCATTCTG
CAAGTTAGAGACGTTAAAACTGGATGTGCTATGAAGAGTTACGATCCTCCAGTCACACTG
AGTAGATCAGACGATATGATGGATTATCGAGTAGTTTAGATTGTCAGAATTCGTACCTGT
ATTAGATGCCATACACATTTCCAGGCAGCACGAGAAAAAACTGGAGCCATGCCCTCAACC
CACCTATCAAAGAATGCGAGTTACAAGACTAGAAATCAATCAGGCTAGTTTACTAGAACA
AGATCAGCAGAATTTTCCTCAACAATCAATCAGTTGGATGATATAACTTTATTTTGCTGA
TCACACACACAAAAGAATGCTATCAAACAAAGCAGTATTCTGATTTTTGGCTCTACGATA
GCTGAATAAAAACATAAATCGGTTCAAAGAATATGACCGTAACTCTGCAAGGTAACTGTC
TTTTTCAATCACAGAATAATAAAGTATAGCAAAAATTAACACTCTTTGTCATTGGACATG
CTAAACAAGAGGTCTAGAGAACAAACTACGATGGCCAAGTATAATTTAGAATAGCCACAC
AAATTACTATGCAATGCCAAAGCTTCAATTTTTACCCTGTGCATGGAGGTCCTCTACTAT
CATCAGAACAGTTCATGCTTGAACGATTGTCATATACTCTCCTGCAGAAGAAATGAGGAA
TTAAAAATGTTAGCGAATGCTCATACAAAAATAACTGAGAAAATAATTCATATTCTGAGA
TGTGAGAATAAGAAAGACACAAGCAAGCACCTATGCACTTTTGTCAGCTTGTTGCGGATT
GTGATTCTGTGGTGAATATCTGTTGATAGATCAGGATCCAATGCAGGTTGTGTGATTTCT
AAGCCTTCGGAAACCATTATATCAATATACCTAAACCAGCAACATGAAAAAGAGAAGGTG
TCTTTCAATAGAAAATACAAAACACAGCAGGATATATATTCGCAAAAGCAACGATCACCA
AAGCAAGTCAATATCCACTCCAAATATATGTTGTCAATAAGAAATCCATACCCCGAAAAT
GTGCAGAAGAACAATTATATCTCACAAACAATAATTGTATAGCTAGAACAAAAGAAACTG
AACCATTGTCAAAATGGCTGTTTCATAACTCTCAGGCCATCACAAAAATTAGCATTTGCG
AACTAAAAAAGAAGATGATTTCAAAAAAATGAAACAAAATGGCGTGTCCCATACCTCCTC
GGATCAAAATTTTCCACTCCAAGGTCTTCGTCCCATAAAAAGATGAAATCGTAGATAGCC
ACAACACTAGGATGCAGAAAACGCTTAGCAAACCACCTGCAGCAGGAACATACATACAGT
CATTCCAAAAGTGGTGGTTACCTAATGCAGCAAAAGAGAGGGAAACTACCAGGGGTTTAC
CATTTAGTTTGGTTGGGCGCAAGTATGTGTATGGCCTTATCGCTCCACTCAAGACTACGC
CACCCGTCAACATTTCCATCGTAATGGAACAGCATGACCGTGTAGCTCTCATTGAGAAAC
TAAAAAGGAAGAAGAGAGTGGTGAGCAGCAGAACAGAACAGATTAAAACCTTCCTCTTAG
CAAACAACCACAAGCGGTTGTATGCTGGAAGGGAAGAGGCCGAGACGAGCACGGACCTTA
CGAGCCATGATGTCCACATTCTGCATCTGCGATATCCCGACCGCCATCGCCAACAGAGCT
TTGTGTTGGTCATGCTTATTCTGCACGTATGGATGAGCAGCGCACACGTTAGCAACGGGA
TGGGCCAACGAGTCGGCCGCTTGCAACTGGAATTGCGGATCCTGGAGGTTTGCAAATTAT
GATGCCAGGACGCAGGGATGTGTCCGGTAAAGCAACGGTCGGAGAACTGAACTGAACTGG
CCGCAACCCCGTATGTTAACTACAGTTAGAGCAGGGGTGAGTGGAGCTAGTATTCTGAGT
GGATACTTTGATCCATTTTTTCAGCATAGTTCACTTACAGCGAAGTAAACAAACTAACTG
GTAATGAGTCGTGGTAACTGTAAGCACGGGAGGCATGGCGTAGATTATCTGTTAGTAAGG
GGACAGTGTCATTCGTTCGTTCATGTATTCAGTGTGGTTGAGTTTCTTTCAGCTAAGAGA
GCCAAGCAATTTGATGACAGCAACCGCAAGAGTAACAGTAGCAGTTGAGAGTTGGGGGGG
ATGGGCAGAGGTGCGGGGGCGGACCTTGGCGCTGGCGTGCTTGGCGGTGGAGTCCCAGAG
CGGGCGGAGGAACATGTCGGAGCTGGTCTCGACGATCCCGCGCGGCAGGCCCTCGGCGCC
GGTCCTCCGGTTCCAGCGGGACGCCGCCGCCGCCGTCCCCCGCTTGCCGCCGGTCCCCCG
CCCCCCCCCCCCCCTCGCAGGCCGGCGCGCCGGAGTCATGGCGCGTCACCGACACGCACC
ACCCCAGCCCCGTCCGGATCCAGGCCTGCACGC