Contig Data
morexGenes
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Map Locations of contig_51365 (6104 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_51365

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66305 3 3253 bp MLOC_66305.3 Available Available LOC_Os08g02640.1, FRAME:-2, EVALUE:0.0, 13108.m00204 protein succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed
MLOC_66304 1 654 bp MLOC_66304.1 Available Available None





CDS Structure of MLOC_66305






CDS Structure of MLOC_66304






Contig Sequence (6104 bp)

>contig_51365 6104 assembly3_WGSMorex_rbca.fasta
CGGCGCGGGCTGGGGGGTGTGGTAGCGCCCCCCCCCGGGCGCGGGCGCCCCCCGGAAGAG
CGGGAGTAGGCCCCGGTTGCCGCCCGCGGGCGCCGCCGCCGCCACGTCCGCGATCCGCTG
CGACGCCATCGCCGCGTCCGACGAGGCCAGCGAGGTGAAGAAGGCGCTCGCCATGGCAGC
GGCCGCCGGCGACACGGCCAGGGCTCCCTTCTTGGCCGCGTTCTTCTGCAGGCTGCGCAG
CGAGATGCTCGGCGACGCCACCTTGGCGCTGGACGACGTCGACGACGAAGGCGCCGACCT
CGCCGTGATCTTGGCGGGCTTGAGCATGGTCATCGTGGCTATGGTCGCCATTGACGCCTA
GCTCCCTGGTTGCTCGCTGCCTTCTCTCCCTCGCAAGAAGCTCTCACGCTGGCAAAAAGG
TGGATGGAGGGGTGCTGTGGGGTGCGCGGGTGTGTAATGCGATGCCCTTCCCTTCCCCTG
CGTTTCTAGAACGGACGATGTGGCGTGGCTAGCTTATCTTGTGCGGCGAGTGTGCGATGG
AGGTTTGAAAGCTTATCTCGCGGCCTGCAACTTGCAATGCCATTGGCTGTGGGAGCAACT
AGGCGGGGACCACACGATTTACATGGAGACTTTGGTGAGAGGAAGTGGAGTCGTGAAATG
AATCGGAAATTCAGATATCTCACAGTAGTAGGAATATAAGCGTGCCCTAGAATGTCCTAT
GGTACCAAACGACAAGATCGTATTCGTCTCAAGAAAAGACAAGATCGGAGATCGTCTGGA
TTGAAACGTCTAGGTATTTTCGGTGAATTTCAGTTAAAAATACACGAAATGACGTTCATC
TTCGTGCTCCACAATGTCTTTCCTCTTCGTTTACGCTGATCATTGCAGAACTATTCTGTA
ACACAGACGAAGGAAGTAGACAACACCATCCAAACGTTGATAATAATTAATAAGTTTATG
AATTACTTCATGCATGAGCATCAAAATATGATGAACCACCAAACTAGATACAGCACGGAA
AGAACAAAATCTGGTAGCAATTATTCACTCCCTACACGGAATCGCCAGGCGTTTCCATCC
ATTATTCGTCAGGGTAGAAACCATGGAGCAAAAACAAACCAAATGGCAGGCTGATTACAA
CTTTCCGACATCTCCACGGGGGAAGACCCTGCTCTGCTCACACTCAGGCTCCGAGCTGCA
GCTTCTTTATTGTGTCGATCTGCTTTGCAGGGTTCAGCCCCTTGGGGCAGGCATGCGTGC
AGTTCTTGATGGTGTGGCAGCGGTACAGCTTGAACTCGTCGTTGATGGAGTCAAGGCGCT
CCTTTGTGAACTCATCACGGCTGTCTTGGATCCACCTGGGAAGAACCAATGTGTTTATGG
CACACGCCAAAGAAGCATGTTATATCTCTCAGACACTGCAGTCGTAAGCCCAATCCAAAG
AACCAATGTGTTTATGGCTCAAGGCATTTGAAACACTTGCAGATATGTGAAAATGATACT
TAAACAAGTTATAAATGACTAAGATGTTTCCCGGTTCTTCTGACTAAGGGCACTTGCAAT
TATTAGTCAAAAGATATTGTTCAAATTTTTGTGTGCCTTATATCAGATCATGTTTTAGAT
TAGAAGTTAAAAGGGCAAATTGTGACAAACAATATGATAAATCAGAGGATCAGATATACT
AAATCTCAGTGCACTCATCAAATAAAACCAGATGAGATAAATATTGAATCAAACAGCCAG
CTTATAGAAACCTTGAACAATAGAATCTTTAGCTTCATAAATGCTGAATAGCATGAAAAA
CAGTACATTACACTGCCTCAACTAAATAAAGAGAAAACCATGCCGTTTGCTGGCAGTAAA
AAAACTTGACAGATAGTTTCAGGAATCAAACACTGAAAGAGGGCAACCTTATTTTGCTGG
CCTACTGAAGAGCTAGTTCTTTCTTCTACCCATCTGTTAACATCTACCAAGATGCTTTCT
TAACACCCATCAGTTCACCCTTATTTGCCAAGGTACGGAACACGATACGAGACATGCGGA
ATTTTTGGTAGACACCACGAGAGCGGCCCGTGAAAATACAGCGGTTTCTAAGACGTGTCA
TGTTACTATTTCTTGGCAGCTTGGACAACTTATAGCGAAACTTATCCCGCATATCTGATG
GAAGATCAGGGTCCCTACAGACAGACTTATAAAGCTTTCCTCTCAGCTCATATTTTGCTG
CAAGCAATCTACGTTTGTGATCACGCATGTTTCTCTTCTCTGAGACCCCATGATATCCTC
GAGCTTGGACGTGCATGAACATGCTGGGTTTTGGTTTCATTAGCGTCCCCCACAGCGGAA
GCCTAAAAAGGGTGAACGGGTGAACGTGTCATGGACTTAACAACATCCTAAAGCTTACAA
CAAAAGGCATTAAATATATTAGACAATTAGCATTTTAATTCTGGTAGAACATAACCATAA
TTTGCGGGTAAAGGGGGAAACTAGCATGCTCTATACTGAAAGAGAGGTTACCACAAATAA
AAGTAACTTCCAAATCAAGGCCACCTCAAGAATTAGGCTACTAGTGGGGGGATAGGGGGG
CTAGGACTTCCGATGTCATCCACAATCCTAATAAGGAAGAAGACTCGCGAAGTCATGAAG
AAGCAGACTGCTGAAATGACAAACTCATGATTATTTCCAACAGTGGCGCATCAACTTCCA
AAACAATCAGCCAAAGACCAGATAAAAAAGAATAAAAACAGTCCCTAGATAAGGCATTCT
TCAACCAAACGGACATTTCACAGTACCCACCAAATGATCATCTACACTGCTTCGCCGGGG
AGCTAGCAAAGAAGTAACAGATGATCATTGCATAAATGGACCTAATAATATATATACAAA
CAGTCACTGATGCCCAAAATGTATAGGCATTCTTCAACCAAACGGGCATTTCACACTATC
CGCCAAACAATCATGTACACCGCTTTGCCAGGGAGCTAGCAAAAAAGTAACAGATGATCA
TTGCATAAATGTACCAAATAATTCACCACCACATACCAGTGAACAATTCTCCTAGATAAA
ACGCACATAGTTGCATGCCTAGAACTACCTAGGCGAGATGAAACCACCCTACGTATCATC
CCACAACCATTTCACAGCATGACACACCAACCGATCAATCACATGTCACTCGGTAATCGA
GTAGATCCAGCACACAGAAGCAACATACTCAGCATATCATCACAATTCACGATATCAAGA
GAATACGAGCGAGGCGCAGGTATACCTGTTGGCATGGAGCAGCGCTGCGGGGCCGAGATA
CTCTTCTGGGTTCCACCAGTAGGACGGGCAGGATGTGGAGCAGCAGGCGCAGAGGATGCA
CTCGTACATGCCATCGAGCTTGGCGCGGTCGGCCTTGGACTGGTAGATCTCCTTCCCTCC
GGCCGACGCCGGGTCCTTGCGCTTGAGCCACGGCTCGACGCTCTTGTACTGGTTGTAGAA
GTTGGTCATGTCGACGACGAGGTCCTTGACGACGAACATGTGCGGGAGCGGCGAGATCGT
GGAGGCACCGGCCGCCTCCGAGGAGATCTTGGTGAGGCAGGCCAGCCCGTTGTCGCCGTC
GATGTTCATGGCGCAGCTGCCGCAGATGCCCTCGCGGCAGCTCCGGCGGAAGGTGAGGGA
CGGGTCCTGCTCGTTCTTGATCTTGAGGAGCGCGTCGAGCACCATGGGGCCGCAGTCGGA
GAGGTCCACCTTGTAGTCCTTGAGGTGGGGCTTCGTCGACGGGGAATCCGGGTCCCAGCG
GTAGATCGAGAAGGTCTTGGTGCTAGCAGGCTTCGATGAGGGCGGCGGCGGCGCGGGGGA
AGAGGAATGGGGCTTGGAGGCGACGAGGCGGGAGGAGAGGGCCGGCGAAAGGAGGGCGCG
CGCCGCCGGCGAGCGGCGGAGGAGGGCGGCGGCGGCCATCGATTTGGGGTTTCGCGTTTC
TCTCTCTCTCTCTCTCTCTCTCCTTTTTCTCCTTTATTTTTGGGAGGTAGGAGAGGGGAA
GGTGGCGCGTGGTGGGCTTAGGCCCAGCTGGGTATATATATGTCGTGGTGCTGATGGGTG
GATGACATGTGGGGTCAAGATGGAGGTAACGGAATGGCGGTTCTAGGGTTGTGGTGGGTT
ACTGACAGGTGGGGCTTCTGAAAGCTTGGGTTGGGCCTTCTTGTGGATGGGAGGGTGGAG
ATGTGGACAAGCTCTGGGCCGTTTGCAAGATGACAATGGAAAGTTGGCTAGGGAAAATGA
CTTCATCGTAGCGTCAAGTTTTATTGGATTTGTGTAGCTTTTTCCTCCTCTCCTTTTTCA
GGTCTTCTATTTCGGTTTTGACTCTGCTGTCATACCGGTCTTCATATATGTGGGGCATGT
GAGAATTCAAGAATGGTGTACTGTGGAAACTGAAACTTATCTTCAAGCTATCATAAATAC
AAGATGTCCTAATGTTTTAATGTGTTTGTTCAATCATTCCATTTTGTATGTAGTCTATAT
TAAAATATATAATATTTATAAACTGAAAAAAATACTGTGCATGTAAAATATAATGAATAA
ATTAAGTCGTTGGCACACAACACATGATCGTTGAGCCATCAATAAAAAGGATACTCCCCC
ATGTACATTTTACTCCGCATATAAGATTTGTTTAAAGACAGTCTTTGAAAATTTTGGTCG
ACTTCATTAGGAAAAAAAATCAACAATCGCAATGCAAAATCAATAGCATTAAATGTATCA
TGAATTTAATTTTCATATTGTATACCTTTAGCATTGTAGATGTTGATAATTTTACATAAA
TATGATTAAATTTTATGAAGTTTGACATAAAAAAAAAATCTTGTATACAGAGCATAAAAG
ACCGGAGGTAATACTGCATGAACCCTTTTATTTCAACAACAAAACCAGTGCTAGCATAAG
GAAAGCAATATCATGAGAGCTGCGTAGGCTTGCTCACGCAAATCCCCAAATCCTACCGTA
GACTTTAGCTGCGAGAGCTATATCTCGCTCCAAAACCTTTCCCTCATGTGCAGCCATTGG
ACCAAACCAGTTTCGTCTGGTTGTTTCTGGTTTGATCTGGTTTTGATCGAGACACTCTTG
TTCGCATTAGTTTCTTTGAAAAAAAAAATATTCTTACCATGATTTTCTTTTGGTTCTACA
ACGGGTTTTTTTTTCGTTTTTATTTGTTTTAGCCGGTTTCTTCATTTATTTATCGGTATG
AATGGTTTCCCTCTTTTTTCCTTAGTTTTTTTTTCTTTTCTCGAGTTTTTTGAGATTTTT
TCTTTTCTTTCTTGCATCAGTTTTCTTCTGTTTCTTATTATTTTTATTTTTCTTTCTCAT
TCCTTTTGTATTTTTATTTGATTTTTTGTTTCTTCCCTGCTTCCTATGATTTTCAGTGTT
TTTTGTGTGTTTCTATATTTGTTTTTTTACTGTGTCCCATTCTTTTTGCAATTGTTTCTT
CGGTTTTGTTTTTCTTTGGTTTCTTTTATTTCTTTTGTCAGTTTTCATTTGTTTCTCATT
TTTCTTTGAATCTTTCAATATTCATCATACATTTTACTTGTATGACAAGAATATTTTTCT
AACACAAGTTTAACATTCTTAGATACAGGTTTCATTTTTTTAATACACGGTCAGTATTTA
TTCTATCCATGTTTTTTAAGATCTTGCAATGGCTTGATTATCATTTTCAAATACAAGATT
ACCATTTTAGATACATGGTCAACATTTTTCTATACACATTAAAAATCAAATGCTTAACTA
ACATTTTTCAAATACGCATGTAAACTTTTTAAATGTTTCATTAGCATTTTCTAAGTACAT
GATCAATTTTACGGAGTGCAATTTAAGTTGTCGCAAGTTAAATAAATATTGCATGAAGAT
AGTGTTAGAGGTAATAACATTGTGGAAGTCCACTAGGAGAGTGACCATTTCTGCTACGTG
TTGGGTCCTAGAGATGGAATGTCATCTCGACGACAAACCAAGGGTCGTTGTCAATTGCCA
CAAGTTGCATGTCATGTTGGAAATATGTCCTAGAGTCAATAATAAAATGGTTATNNNTAT
ATTTCCTAGTTCATGATAATTTGTCTATTGTTCATGCTATAATT