Contig Data
morexGenes
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Map Locations of contig_51359 (7375 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_51359

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66299 2 1515 bp AK368394 Available Available None
MLOC_66298 5 2329 bp MLOC_66298.1 Available Available LOC_Os02g50490.1, FRAME:+1, EVALUE:0.0, 13102.m05730 protein endoglucanase, putative, expressed





CDS Structure of MLOC_66299






CDS Structure of MLOC_66298






Contig Sequence (7375 bp)

>contig_51359 7375 assembly3_WGSMorex_rbca.fasta
AATCCAGCAGGGCTTCGCCAAGCTCCACTTAACTAATCTAGAGGAGAAAATGACCTAGAG
AGAGGGCATCACTTGGCGGCGGTGGCGGCTTCATGCGGGCAGTGGCTCGCGGCGCCCTGT
TGGCCGGATGTAGTCCCTTTTGGGCCCGATCCTGGTCATGGCGGGCCAGCTAGGACTACG
GCGACTGGCCTCCGGCGGGTCTGGCGAGGCTCCCCATGACGAGGATGGCGGTTACGGCAC
CGCGTTTGTTGCAGCGTGACGACGGGAGCTTCAGGGGCCCGAGCTAGGCCCGGCTGGGCA
CTTGACCTCGTCTGCTCCTGTTTGCGTCCGATCTTCTACTGTCTAAGGCGGTGGAGGATG
TTCCCGCCCATGTCGCTATGGTACTGTCGGCCCTGTCTACGGTTGCTTTCTTTTGGTCTA
GCCGGCCTCGCGGCGTTTGCCTTGATGAGATGGCCATGATGATCTCAAGACTATGCAAGC
GCATGTTGGTGGGCGGCAAGTATGATGGAGCCAACGGTTGGTCTTGAGTGTGGGTGTGTG
GGGATTGACGGAAATCGTTGTCGGTTCATGCCGGCACTAACGTGGTGATGCCGGCGGGCG
TTGCCTCCCTTCTTGAAGGGTGTCGGGTGTACCCTCTCCCCACTCCTCTCCGTGTACCGG
GAGAAATTCTAGGATCCGTTCGGACAGCAGCGTCGTCGTCACTATTCTTCATGAGGCCTT
GTTTGGCACAAGTGGTTTTCAAGCCCCCAAGAAGGTGGGGATTCCAGGGGATTTGGTGAA
TCCCCCTCTTCCACCCAATTCCCTTGAATCCCCGTTGCACAAGTTTCACTAGTACTCCCT
AGATGCTTCAAAACTCTGTGGATTGGGGGGATTTTGGTGGTTCGAAGGGGTTTGTACATC
ACAAACCCTTTGTACCAAATGAACTCATGGGGAATTTTGGGGTTTTCTGTCCCTGCGGGG
ATCATCCCTTCTGAACCCCTCCAACCCCCTTGTGTCAAACGAGGCCTGAAGGTGTTGCTT
GGTGCACGACAATTCGTAGACATAGGAGTATGGTGGAATTCTCTGGAGGGCGTCGCACTT
ACGGAAAATCATCGTTTTTGTCAATCCGACGTTGTTGGCATTTGTTTCTCCTGTTTTTCT
TTTTGTGTGTTCTTTTTTTTAGGCTTGAGTGTGTTATTTGTCCAACAATGGTATAACGGT
TGTATTGGATGATTGCTATATTAATATAGCGAAACGGAAGTCTATTTCTAAAGACGCCTT
GGTCAAAAACAGTAGTATGCCGACACAGTTTCTCAAAGACGTTCATACGAATAAGGTATA
CGCGTTTTTTTTTTTTTGAAAAAGAAACGAGTCATCCTTTTCATCAGACCGGTCGAGTGA
CCTTAGATACTTACCTGCTAAGATTTCACAGTGGAATGAAAACCTGTTACGGGCCACCGG
CCGGCCGGTGGACCGGCGACTTGGCCCGAACGAACTACTACGCCGGTCTCACGCGCGTGC
TTCGTCCATGTGTTGGTGCTCGGTGGTACGTGTCCGGCTGGCCCCAACCGATTCACGTGT
ACACGCGCGCGCGCGCTCTGAAAAAAGCACGTACATCCCCGGTCAAAATCTGCTCCGCTT
GCGTGCGTCGTCGTTAACCCAAAACCCAACCCAACCCAATCATCTCAATCTCCCCCTGCC
TCACCAAACAAATCGATACGATACAAATACAAAACCCGAACGAGTCCACCCCCCTCCAAC
TCCAAAAACGCGCCCAAAACGCAGCCGCGCTCGTTTCTTTCCTGCCTGCTCCTCTCTTCT
CTTGCTATCCACCTCCTGAGTTTTATATTCCCCCCGTCCCGGCCCCGGCCCGGCCGCCGA
ACCAGTTCAACGCGCTGCGCGTGCGTGCGCCGGACCTGGACGCCGGCCGCGAATATAAGC
GCGCCAAGCCACGCCCCTCAGGTTGGAGGACACTGCCCTGCTCGCCACACAGCCTAGCCC
ACAACGGCGGCAGAGATATATACGCAGATCATCACACACACACCAACACCTACGCTCGCA
CACAGGCTAAGCTAGCAGAGCCGGCAGAGGGCGCGCTCCGGGCGCATGCGAAGTTGCCAA
CGATCCGAGGAGCATCTTCTTGCGCCATGAGATCGGGGAGGGGCACCGCAGCCGCGGCAT
GTCTCCGGGCCGCGCTGCTGCTACCGGCGCTGCTGACGATGCTGATCGCGGCGGCGTCGT
CTTCGGCGGCGGAGGGGGGCAAGAGCGGGAGCGGCAAGGCGCACAACTACGAGGAGGCGC
TGCGGAAGAGCCTGGTCTACTTCGAGGCGCAGCGGTCGGGGCGGCTGCCGCACGGGCAGC
GCGTGCCGTGGCGCGACCACTCGGGCCTCACCGACGGCCTGGAGCAAGGGGTGGACCTGG
TGGGCGGCTACTACGACGCCGGCGACCACGTCAAGTTCGGCCTGCCCATGGCCTTCACCG
TCACCATGCTGTCCTGGAGCATGATCGAGTACGGCGCCGACGTCGCGGCGGCCGGCGAGC
TCGCGCACGCGCTCGAGGCCATCAAGTGGGGCACCGACTACTTCATCAAGGCGCACACGC
AGCCCGACGAGCTGTGGGCCGAGGTACGTACCTACATGCCGACGAACGATCTCGTGTCAC
CTCGCCTCGGCTAGCTGTGTTCTTCCGTTCAGACACGATCGATCATGACCATGACATGCA
TATGCAAATGAGACCGACCAGTTCCAAGCCAAGCTAGCTGTTGCGCACGCAAGAAAGAGA
GAGGGAGAGACCAATTCAATCATGCACACCTAGCTACCTTGTTGCACTTTGATCGATTAC
TTTTTTTTCATGAATTATGTTATAGATACCCTATATCTTTTTTCTGTAGAAAGATCGATT
ATATATTGTATATATAGGAGTATTTTCTGGTTGGGGAAGAAAAGAAAAAGGGGTTCTTTC
TGGTGAATAACAACAAGCGTGTTAGGTAGGCGGCCAGTTTGATTTGATGAACGTACGTAC
GAACGAACGAACGAACGGCAGCACTAAACTATGCGTGTTTTTTTCTTTCTTCCACACATG
GCGCGCATAGGTTTCAAAAAAGCTTTCGTCGGTCCATGCATCCGAACCGTCTGATCAGTT
TCCTTTTTTATTTTTTGAGCTGGAAATAATCTCCTTTTACTTGCAACACAACAACAACAG
GTGGGAGACGGCGACACGGATCACTACTGCTGGCAGCGGCCGGAGGACATGACGACGTCG
CGGCAGGCGTACAAGGTCGACCGCGACCACCCGGGCTCCGACGTCGCCGGCGAGACGGCC
GCCGCCATGGCCGCCGCCTCCATGGTCTTCCGCAAATCCAACCCGCACTACGCCCACCTC
CTCCTCCACCACGCCCAGCAGGTACATACATACATACATACATACATACATACTCGACAC
ACACACACACACACGTATACATTGACGTACGCGGTGCATGCAAGGTCCTATGTGGAAAAA
TGGAACGGAAAAAAATATCGGTGCAAGTTTGGAGCTTCGTGTAGCACCAGTCTGTCCGCG
TACTGGATTTTGGAACATAGCGCGCGTATTGGTAGCTTTGGTCAAGGGGGGTGCCGGTCT
TTTCATGGGCGGTGTTCTTTTCTTGTGCCGCACATGCCAAGTTGCCAACACCTCAACACG
ATCGACGTCGATCCATCGTAGGGGCTGGCTGCCGTGTGGGGCCGCCGGAACGCAACCTCT
ATCTGGTGGACGGGGGTCATGGGAAACTTTCCATTTGCTGCCTGCCTCCGGCCATGCATG
TATATATGATTAGGTGGCCAGTTCAATCAATCACATGCTTAACTGGGAACATTATTAGGA
AGCGGTCGTCGTGTCATCATCATGTGCTAATTGAACCGCTCCGTATTCACACCCACTGAC
CTGGCCACCCACCTGCTGCATGCTCTTCAAGCGTCAACTATAAAATGCGTCAATGAATGA
TACGATACGTATGCAACCTTAATTATCATTAGGGCTTTCTTAAATAATTTATGAACAAAC
CAAACTAACAGCGTTACAATCTTAGTTGTTGTTGGCTGATCATGTTTACTTTGGCTTTTT
GTGAACGTGCGTGCAGTTGTTCGAGTTCGCGGACGGGTACAGGGGCCAATACGACAGCAG
CATAGCGGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACAAGGACGAGCTGCTGTG
GGCCGCCCTGTGGCTCCACCGCGCCACCGGCAAGGCCAGCTACCTCGACTACGTCGTCGA
CAACGCCCACGACTTCGGCGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAA
GTACGCCGGCGTCCAGATCCTCGCCGCAAGGGTACGTAAGCTATCATGCATGTGAAGGAT
CGATCACTAGACGGCCGGCCGGTCACTGACGAGGAGACCAAATGATTAATTAATTGCAGC
TGCTGCTGAGGGGAGAGCACACGGCGGAGCAGAAGAGGACGCTGGAGCAGTACCAGGCCA
AGGCGGAGCACTACGTGTGCGCGTGCCTGGGCCGGAACGCGGCCGGCGGCGAGGACGCCA
ACGTGGAGCGGAGCCCGGGAGGGATGCTCTACATCCGGCAGTGGAACAACATGCAGTACG
TGACCAACGCGGCGTTCCTGCTCTCCACCTACGCCGACTACCTGGCGGGGGCCGGCGTGG
GGACGGTGGCCTGCGCCGGCGGCGAGACGGCGGGCGCCGGCGAGGTGGCCGCGCTGGCCA
GGGCGCAGGTGGACTACGTGCTGGGCAGCAACCCGAGGGGGGTGAGCTACCTCGTGGGGT
ACGGCGCCAAGTACCCCGCCAGGGTGCACCACCGCGCGGCATCCATCGTGCCCTACAAGC
ACAGCAAGCAGTTCATCGGGTGCACGCAGGGGTTCGACCACTGGTTCGGCCGCCGGAGCT
CCAACCCCAACGTGCTCGTCGGCGCCATCGTCGGCGGGCCCGACCGGAGGGACAGGTTCA
GGGACAACCGGGACAACTACATGCAGACGGAGGCGTGCACGTACAACACCGCGCCCATGG
TCGGGATGTTCGCCAAGCTCAACCGGATGGCCAGGGAGGAGAAGGTGGCGGCCGAGGTGT
AAATGGATTAGATAGGGGTTATAGGTCCAGGGGGCTGTACAATTTTCCCCATTCTTTTGT
TCATTTTTCTCTCCTTCTTTGGAGGTTTCTTGATACACAGGAAGGATGGAGATGGGTGTA
GAAATACGAGGAAAAAACAAAGGGTGGAGGCATTCACATGTGACATGCAAATGTAAATTC
GCTGCCTGTACATACGAGAAAAGGAAAATGAGAATTCAAGTTATACATCGGTGATTCTAT
CGAGTTTGCTTAATAATTGTCTACGCTTGGATATGTTATCGCTCGTCAACAGGGGATAGA
TCAACAGCAAAGCACGAAAGAAGGCCCACGGCACCACGATGTCATTTTTCTTTCTTTATC
TAGAGATCATCCTTGATTCTGATTACGCGGGGCTGTTATTTCAAACATTCTGTCACCTGC
ACCCCTTTAATAGCTTGAAGAGAGCATTATATAGTGATTACTGAGCTGCTGCAGACTAGA
GCAGACATTGTTTTTCGAAAGAGAGGACAACAAATGTGCTCATAAACTAGCTAACATTCT
CAAATCAGTGGTAGAGGGGCCATCTTTTTGGGCCAACTATCTCTGGATCTGGAATTGCTG
GTGCTATCTGATTGTAATGATGGTGATGTTTTGTTAATATAATTGCAATATTTCTCTAAA
AAAACTCAAACATGGTTATTTCAAACAAATAAAAAATGATTTTTTATTTTGTTTCGTTGT
TCACTCGAACGCATGTGATCTCAAGAGCAAAGTTGAATTTTCGTAACCAGTTTCTTTTTC
TTAGTTCCCCATACAATCATTCGAGATTCTAATTGGGGTCTGCTATCTTTAATCCCAAAA
TTTTGAATCAGGGAACTAATGCCCCTAGGACAGCAAGAGAAAAACTAGGAAATTAAAATC
CAAGGATGAAGCAGTTACAGAGGTGGCCAGAAGAACACATAAACGGTATGAACAAGAATG
CTCAAGATTTTATCGTGGCCAATCAAAGAATGATGATCCAGATCCCTTGCATACAATACC
AACCAGATCCCTTGCATACAATACCCAACATATCAGCTCGAATTAAAAACACGAATCTCG
TGAGGTCAAAAAGAATGGAAGGAATATAATACACCAATGGGTGAAAATGATACATTGCAA
GTTTGATGGAAGACTTACAAGTTACAACAACAGAGTTCAGAACCAAGATCAACTGATATG
TGGCAACAAAATCTCACAGGCCGAGAGAGCATCAGACTGATCAATATAGCAAAATGATCG
CGTAACAATCACCATACATAACCTACATATTTCTATAAACAACTGAGGTCCTCTGGATAC
ACACCATTCATGCGATCTCTCGCCAGCTCTCTATTCTTCATCCCAGTCTGTTTTCCCATC
AATATCACAAGGGAGTGAGAGCATGCCATGAAAAATATGATTCTCACATTGCCAATCAAC
ATCCTTAGTATTTCGGCGGTGCAGGTGGCAACCGATTTGGTGTGCGTCGGCTGCCTGAAT
TGGCACCATTGGCGTCCCCATTTTCATACCGCCGGCCCCGACTGTCAGCACTTCTCGATC
TTGACTCGTTCTGTGAACTGGATCGGTCGGCAGAGCCATTTGCTGCAGCACTGAAGGCAG
ACCTCCAGTCCTCACCCGACTGGCTAGGGCTCTGTGGGCCACTCTCTGCAAGTGATGTTT
CATTTCGTCAGGGTAAAGGTTTGATTTGTGCACCAGTAAAGCAGAATAAAATGAAGAAAA
TTATATCCCAGGGGTATTACTAATATCTGTAATCACGTCTTAGAATAAAAGGCGCATGTA
AATTCACCTCTCCTTTGCCTTCATTTATTTCCACCCTCTCCTACATAGCCTCCTTTATTT
TATCTCTAGTGCCCAAGACATTAATATCATGGGCAGTATGGTAGCATCCCTTTAGATGCA
TATTTTATCTTACTCAGTCGGTGATAGCTATCAATACAAAATAAAATACAATCGAGATAT
TTTAAAACCAAGGAAAGAATGTTTAGCAACTCAAAACTAGCATGCTCACGAGTGGGGACC
ACAAGGCCCTGAACCTAACGCAAGCATATTGTCCCTCCTAAGTTTTGGCCAAGGATGTGT
GCCACCACAGCCCAACCTCGATATAACAAATTTGAGCTTTGAACCAAGTACCTCACCTGG
TGTGAAACGCTCTACTGTAGTATTCCAGGTTTGTTTGCATATAAAACAGGTCTGAATTTT
TTGCAGACGCTATGTAAAACAAGCGAAAAGGTGCATCCCCCCCCCCCCCCCCCCC