morexGenes - Barley RNA-seq Database

Contig contig_51352
Source Contig contig_51352
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_51352 (7701 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_51352

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_66290	2	1151 bp	MLOC_66290.1	Available	Available	LOC_Os02g38820.1, FRAME:+3, EVALUE:6e-103, 13102.m04277 protein expressed protein
MLOC_66289	3	3896 bp	MLOC_66289.2	Available	Available	LOC_Os02g38810.1, FRAME:+2, EVALUE:0.0, 13102.m04276 protein 26S proteasome non-ATPase regulatory subunit 6, putative, expressed
CDS Structure of MLOC_66290

CDS Structure of MLOC_66289

Contig Sequence (7701 bp)

>contig_51352 7701 assembly3_WGSMorex_rbca.fasta
TAAATATAAGTCTTTTTAAAGATTCTATTAAAGGACTACATACGAAGTAAAATGAACGAA
TCTATACTCTAATGTATGTCTATATACATCTGTATGTACTTTTTTAATAAAAATTCTTAA
AAGACTTATATTTAAAAACGAAGGGAGTAGGCTGTACTAGGCCTGAACATGCAGCACACG
GTTCGATATGACACAACCCACTTACTAACCGTATCCCAATGGGCCGTCCCGTGCCATGCA
TGATTAGCATGGGCCGGGCCAGCCTGTTTGGCCAGCTCTGGCCCCTAACTTCCAACTCGA
ACCTACCCACGGCCTGTCAGAACTCCCGACGCCGTGCGATCCAAGCGAACCAACCGGAGG
GAAGTGCCCTCAACCCAAACGAGCGGCGACGAGATGGACGGAGGCGGTGGCGGCGGAAGC
ACCAGCGGCGAGGATGGGAAGCAGGAGAAGCACCTGTTGCTTGCCCACAAGCTCTTCCTG
CTCTCCCACCCCGACGTTGACGACCTCTCCAAGGTCGACATCCGCTCCGACGTGCTCTCC
GCCGTCAAATCCGATGGTACCGCACCGTCCCGCCCCCCTCGCCGCTTATCCAGTGTGCCA
GCTAAACTGATCTGTTTTTTCTTTCGTGGGGTTGATTGCCAGACATGGCGCCGCTGTTCG
AGTCGCTGGCCGCCACGGGCGTGCTGGAGCCGGACGCCGCACTGCTCGCCGAGATGCGCG
CCCGGATCGACGAGGAGATCCGCAAGCTCGATGAGAAGTGAGTGGGTTTGCCCTCTCGTT
CTGCTTAATTCTTTTGTAGAGCTCGGTCTAGTGCTAATTCGGGTTCTAGACGTGGTCAAA
AGTAGACGATAGATCTTGTCAGTAAATTGCTTTGCGCTGGATAGGTATGAATTAGCACTT
CGTGTTTTGGACGCAGGAAGTGAGTCTTATACCAAACTGCTCATAATGTTTACCGTCCTC
CAAAGACTGCGAAGTAAATTGGAATGTTCCCCAATTTTGTGTGAGAACTGTGCCTGTTTG
TGTTCTATATTTCTGTCAGAACTGAGTCCGTTATTAGTATTAGGAAACTATAGCTCTTTC
GGAATTTACAACCAGGCATTGAGAAGAGTAATTAGAGTATATTAAGGAAGGGTAGAACCT
TTTGATTTTTGGCGAACACGCACAGAATTTGCAGAGTTTTGTCGCCCATGGTGACTCGTA
CAACGGCAGGGGGCTGGCTATCTAGGGCTGCCAGCAAGACAACGCCACTAGGATTAGTAC
AAGGCTATATCCGTATGCTAAGGAACCCTTCCGCTCCTGCTTTGATCCAGAGCTCACCGT
CGGTTTGGTCTTACAACTCAGCTGGGATGCCGAGCTAGGCGAACCGCGTTGTCGAATCCT
TTGCAGGGAAGCTTGGGAAGACCGCGTCGTGCATCTGGCCACCAGTCAGGCAGGGCAATT
TAGGTTGAATAGTCAATGTTAAGGAGCAAGTGGAGTTTCTTTGAGATACGATGTTCTGGA
TGAGATGAATGAAAGAAATTATTAGTTATTAGTAATCTTGAATTGTAGACAGGGTATTCC
TGAAGGCTGAATTATTAAAAACACGTTGGTTCAATGATTATGGAATTAGGCTTGTTTCTT
ATTATCCATGATGCTCTTCCCAGTTATTTTGTATCTAATATTTCCACTGCTGTAAATTTT
GATGAGTACCAATTTGGTTCCTCTAAACTAAACTTTTGTTTTGTATATGAAGAATTGCTG
ATGCTGAAGAGAACTTGGGCGAGAGTGAAGTGCGTGAAGCCCATCTTGCCAAGTCCTTGT
ACTTTGTAAAGGTTGGCGAGAAGGTATGAACTTGTTTACTTGTAAAATAATTATCTGATG
CCTGGTTAATAAAGTACAAGTTCTAAATATACCTGTTTCTATTGTCTGAAATCAACTTTA
TAGGAAAAAGCACTGGAACAACTTAAAGTTACTGAAGGAAAAACTGTAGCCATTGGCCAG
AAGATGGATCTTGTGTTCTACACTTTGCAAATTGGCCTTTTCTACATGGACTTCGATCTC
ATCTCAAAATCAATTGATAAGGCAAAGAAGTAAGCCTTTGTTCCATCTGTAGAGTTCCAT
TCTGCCATTTGGAACACCAGTGTGATGGTATTTGGCCACTTATTCTACTGCTTTTAGGTT
GTTTGAGGAGGGAGGTGACTGGGAGAGAAAGAACAGATTGAAAGTGTACGAAGGCCTATA
CTGCATGGCAACTAGAAACTTCAAGAAAGCTACCAGCCTGTTTTTGGACTCCATCTCAAC
TTTCACAACCTATGAGCTGTTTCCATACGACACTTTCATCTTCTATACAGTCCTCACGAG
TATAATCTCATTGGATCGTGTATCTCTAAAGCAAAAGGTATTTCAACTTGGCTCCGTCTG
TTATATTTTCTTGCCGTAGTTATCTCTAACAAAACAAATTTTTCAGGTGGTGGATGCACC
AGAAATCCTTGCAGTGATAGGCAAAGTACCACACCTCTCAGAGTTTCTTAACTCCCTGTA
CAATTGCCAGTACAAGTCATTTTTTGTTGCATTCTGTAAGTCTTGTGATTATTCATTTTT
TATTGCATTCTGTAAGTCTTGTGATTATTGTTTTTGAATTGCATCGTATTTGTATGTGCT
TGTATTAATACCTGGTCAAATATATTTTTTCAGCTGGCTTGATGGAACAGATCAAGTTAG
ACCGTTATCTTCAACCTCATTTCCGCTACTACATGAGGGAAGTGCGCACTGTCGTCTACT
CACAGTTTTTGGAGTCATACAAGAGTGTGACGATGGAAGCTATGGCTTCTGCATTTGGTG
TGACTGTTGATTTCATAGACCAGTAAGTGATGTGAAACAATTGCCTAATTTCATATGTCC
ATTCCTATGCACCATACATATATATCGTTTTTGTTTCTGCTGTCGTATTCATATGCTTTG
TCTTTCATTTGTTGTAGGGAACTTTCTCGTTTTATTGCAGCTGGCAAGCTTCACTGCAAG
ATTGACAAGGTCGCTGGTGTTTTGGAGACAAACCGGCCTGATGAGAGGAATGCTTTCTAC
CAGTCGACCATCAAGCAAGGGGACTTCTTGCTGAACCGCATCCAGAAGCTATCCCGAGTC
ATTGATCTGTAAAAGTTGCTGTTCTTGTTGGAGCTCTGACCCAGCAAAGGTTGTGCCCGG
TTGTTGGATCTATTTCAGCTAGCCTCCTAGAGGATATGGCCAGTGCCTGGCTTTGTTGAG
CGTGCGAGGAAGAAGTCTTGTATGAATTACTATGAACTCATATCCCAGAAGATCAGGCTG
AAGGATGTTTCTTCTGTGATGAACCTGTTTATTCATTCTAAGCCTTATCATCTGTGCTTT
AGTTCTCGTGAAGTTATTTGTTTGGCATATTTGACATATACTCCGTATATAGCAATGATT
TCCATGATTTGTCACGTAATACATTTCCAACTGAATTCAGACACCTCATATGGCGATACA
CATCCGTGCAAGCTTTACAACCACTGTCAACTCTTGCAAATAATTACTTCAAAAAGAAAA
AACTCTTGCAAAGAATTGAAATTCAATATAAAGCTGTGGTTGTCGCTGTTCTGCAAGTAC
ATCAATTGGCTTCATTTCTAAGATTTCGCGGGGCTGCCTAACATCATATACTCTGTGAGA
AGTGAACAAAGTTTGTTGTTGCCCACAGGGAGGTTACACTGCAAAACTCAAAAAGCCTCT
GGTGTGCTACAGAGCAGCTCGGGGGAAACTACAGCCGGGCGGTCCACTCGATCCCACTCT
TCCGATCAGCTCTCGGGCTCTGCAGGGATGAAAGAAATTTTGCGTGTGATGATTTGATTA
TAAAGCGGGGGACAAGTCGGGTGAGTTTTTTTTTTTTTTTACTTACTGAACCCTTGCTTG
GGCTTCTGCTGCTTCCCTTTCCTCTTGCTTCCTCGTCTCTTGGAGCGGGGCCTCTCGTCT
TCTGCTTTTCCTTCTGCTTCGGCCTCTGCTGCGCTGGCAGATCCTGTTATCTGTGCAAAG
GATTCTTTGGCGCCCGAGGTTACCTCACCGAAGAAGTCCCTCACCTTGTCAACTACACTT
TTGAGCTCTTCTTTCTTTGGGAGCTGAGATGACAAGGAAAAAAAGAAGGTCTTGCTGTTA
GTGCACAACACATTCATTTCCTACCATCCTGATGTGGATGTCACTTCTGCAACAGAGATT
TTTGGTACTCATTTATATTTTGAGATTCACTATGTACTCATAGTTCATGATAGTTTAGAT
AGTAAGGGGGAGAAATAGAGTTTTTTTGTTTTTGTTTTTGTAAAACATGGCGAGTGTTGG
CTTACGACAAAGTTTCCAAGGTAGTGGGGTTCTATATGTGGTACGGAGTATTTCGTTCAT
ATCACATATGTATACCCTACCAATGGATGATCATGACCAAAAAAATGCCGCATCACAGTT
AATGTGCAAAATGAGGGCGTTCTAGCTTTTTGGTTTGCTCATGTTCTGCCCACACGCATG
CCATCTGGAAAATTGATGTACTAGCAGAATTTGCCAAAAAAAATTTACAAATGGGTTGCA
AAATCAAAGTACAAAATGCAAGGGCTTGCCCATTTTGTGCGATGAGTATAAGCGCATTAG
AGAGAGAGAGAGAGAGACGTACCTCGAGCACGTTGCTTGTCGCCAGTGCAGACCTGAGGT
TCCCCTTCTCCTGCTCAGCCAAACGACAAGTATATGAACTGCAACCTCCATTTTGATTTT
TGAATGAAAGGCTAGTACAACCAGTAGAAGATATGATTATCGAAACGACGCGCCCTCCCT
CCTGTCCTGCAGCCAAGGATGAGAGAATTACCACGATCTTGTAGCCGTACCGGAACTCGG
TTTCTCCCTTGAGCACGCGGAACTGCTCTTTCGCCAGGTCAATTATGTCATCCTCGTCCT
GCACACACCACGCACACAAACAAAACTCTCAGCTTGTACACGACACCGGCGACTAGATTC
ATAGTGCGTACGAACGTATGAAGGATGGTTTACTTTGTAAATGACGGTGGCGAGGTTCCG
GGCGAGCGTGTCCTTGTAGATGTACTTGCCGAGGAAGTTGTCCTTGGCAGCGAGCATGAT
CTTGGCGGTGGTGCCGCCGGTGACGATGTTGAGCGGGTACCAAAAGTACACCTGCGGGGG
TTGCCGCCGTCCTTGACTCGATCACCAACAAGGAATATACATATATACCTAGGCTAGATA
TACAATGACAGGGAATCAAGTCAAGGAATATACATTGGCGGTGCGGATGAAGATGACGAA
GCGGGGGTTGCCGTCGTCCTCGATCTTGGGGAGCTGCGGCATGCGCCGCTGCTGCTGGGA
CTGCCGGTCCGACCAGCCCCTGCCCCCGCGGGCCTCCACCACCAGCGCGCGCCTCGCTGG
CCTCGCGGCGGTCCGTGCCAGCTGCAGCCTCCGCGGCAGGAAGGAGCCCGCGCTGGCCTC
CCCGGGCGTCAGGTGCCGGAGCCGCGCCGGCCTCAGCGACACCCCTCCCACCACCTCCAT
GGATGCCTGTGTTTAGTTTTCTGTGATTGTCCGTCCTCCGTCCAGGGGGGAGAAGCAGTG
GAGGGGGACGACGGAAAGATGGCCAGCTTATCTGGTCGTGGAAGCCGGACGCCGGACAAC
TGGATACTGACAGTGGGCCGCTCCGGTCTACAGTGTCAGTGACACCTTGTGCGGCTGCTT
TTCTTCTACGAGGCTTCTGCTCACAGCTTACATTACAATATCGCTGTGACCAGCTGGTGT
TGATGTCCCTGGGCTATCCAAAAAGATGCAGTATCTCATTCTTACCCAATGTGGTGGCGT
GGCTTCATGTGTGGATGCCACGTTATGCTAGCACGGCCTTTCATTTTTCTTGTTCTAAAA
TACGTATAAGCATGCGTAGCATATATTCATAGAAAAGGGGTAAAAACACACATCCACACA
ATGTTTTACAAACACGACTACTGATGATCTACCTGTCCAAGCAGCCTACGGAAAATCAGA
GTCATATCGATCTTAAACTTACAAGCCCTCTGTTACACAGCTCCTTCGTCTAGATATTCC
TAATGACATTTTGCACCGAAAGATTTGCGTTGTCAAAAACTACATTGTTGTGATGCTTTC
ACGGTTGCCACAAGGATAGAGGTGTGCGAGTCCTTCCTTACTTGTGTCTCAGGGTTTAGC
AAAGTGCACCACCATCACTGCAGTAGTTGGTCGGACGTTAAAAGTGTCCAGTCGGTACAT
CCCCATATCGTCGCCACTTCATACCACATCGACCTCGCGAATGGGCAAGCGATCAACAAG
TGGTCTATACTCTCCGGTGCTTGGTCGCATTCATACAAACGCTTTGACGTGACAAGTCTT
TCCTGGCCAACTGATTAGATGACCATCGTCGATTGTGCAGGGCAAGCAAAGAGGGAAAAG
CTTGCACTTCATGGGTGCCCTAGATTCCTAGCTGAAAGTGACTTCCAAGTCATACATGTG
GGCAACGAACCAGCTTGTGTATGTCGAACACACATAATAGATGTCGTCCGGCTCCCAAAC
CCATCTGACTATGTCGCCCACTCCATAGCGCAGCTCCATCGTAGTCGTGGTTTTCTAAAG
GGCAAGATACTGGACCAATTCACTTGTCATCAAATCCGGCCATAGATCACGTGCTCATGC
ACCATTCATAGCGTCCAATTTGTACATTGACGTGTGTGCCTCCCTTATTGTATGAACAAA
TTGATTCCTTGCTAAAGCAAGATGAACCAATATCTCTGTACACCGTCATCTCCTTTAAAT
ATTTCTTAAAGGCAATCTCAAATTTCTTTAACGGTACTAAAGAGAACAGTGGAATCAGAA
TACTCATCATTGAAGGCAAAAGTCTCGGACCACCACATGGCGTGTGGAGGGCTTGCCTTT
TGACTGAAAAAGGGTTTCCCCCCGCTTTGTATTCCAAAGCAACCAATATAGATCACAGAG
CAAATGCTGGGGTGAGCAGCACATCAAGCCCAAAAAAGAAGAAGAAGAAACAATGCCAGC
ACCGGCAGCTCGACAAAGCATGGTTGATCCTCTACCATTGCGCTCTCCGGAATCGACCCA
CCACGATCCAAGGCTCCGATCCTTCGTGTACCAAGCAGCACTCCAAGAAGGAATGCGATG
TTGCTGCTGGCCGGACGTGTCCTAGGGTTTCCCCTGGCACGTAGAGGGGAGTGTGGGATG
GAGACCACAGACACCCTTCAGGAAGGACTCGTGGCACCCTCACTCCTCACCGCATCGGAG
CTGGAAGAACCGGCAAGGATTTCTCCCGCACTCCAAACCCCACCGCCCAACCAGACCGGA
GCCAACCAGCCAACTCGCCGCCCGCCAGCATGCGCCATCGTGGTCACGATGCACCCATGC
CACCTCACTGAGATCACCATAACGAGGCCAGAGGACTAAGAGAGGAGCGTTGGGCGATGG
GAGAAGCAGCACCGTAGCAGCACAGGAGGGAACCACCTCCACCGCCATCGTACGGGAGGC
CCGTGCCTCCAGCACCATCGCGGCCGCCATCCGGACACAGCAGTAGGGCTTACCAGGCCA
CCCTTGGCCCGGGCAGGCCCGAATTGGGCCCACTAAGCCCCGTCGGCCATGCTACAGCAC
GGCAGCGTTAGCGCCGCCAACACCCCACTGCCCATCGCCACTCTCCCGTCTCCCATAAGT
CACACCGCCGCCCCGCCCCGC