Map Locations of contig_51348 (6695 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51348

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66287 3 2212 bp AK365327 Available Available None





CDS Structure of MLOC_66287






Contig Sequence (6695 bp)

>contig_51348 6695 assembly3_WGSMorex_rbca.fasta
CCCGCCGTCGCCATTCTGGTTGCAGCTCCTCCCGTCTGCGGTTGAAGCTCCCGTGTAGTC
GGATGTAACTTTTCCGTCCACCATGGATCTGACGGGAACGAAGAACAGATGTGACAGAGA
CGAGAGGAAGAATAGGTCGCTGGAGAACGTGCCCGCCACCGCCGCTGCGGGCCCTGTCAC
CGGATCCGCCGGTCCTGTCACCGGAGCAGCCACCAGCCCTGTCGCCCTCCCAGTCGCCCC
TGTCGTTCGACGAAAATGGTGGTGTGTGGATGATGAGGAGATGCAAATGACCGGTTGAAG
CAAATCGGTGGTAGGTGAAAAAAAAAACAGTCCACATGAAGCTGCGGGCGTGTTTCGGTC
GCTGTAGATCAAACGGACCTAGCGAGTCTGGTGGGACGTGCCGGCTGAAAACGTTTACAT
AAAGAAATAGTACGCTTTAACTGTCGAAGAAAAAGGAGGTGTGGCAAATAGCACGTTTGT
TTCTGGTATAAGTGGCCAAAAGGGAATTGTGTAGACAGTTGAGGGGCCGAAAAACATATT
TTTCTCATTTCATTGTCATTAGCTCATTAGAAAAAACGATAATGTGTCAATATGTTATGA
TATTATTGTTAGTATATCTTCCAGAAAACAGCTTAGTTCAGATTGAGCTATCAAAAATAC
TAGGAGATAAGAACGAATAGCTTATTGATGGTACCGTCCAAACAAAGTGTCGGATGAAGC
TACCGAAACATTCAGAACACAGGTACAGGTTGATTCTACTAGCCACCTCTAAGAGGTGAA
TTATACACCATAGCCCATAGGTGCCGACACATCATCTCTCAACGCCGGGAGAAGGCGGTT
CCTCTCCTGGAAAGTACTTTGGCAGAACGGAATGCACAAAAACTGGACACCACTAGATGG
AAACTGATGAACAATGCGCAAGGTTTTTTGGTGGTAGTGCTAGGGTTAATGAGGTACATA
GATGACGGGTCATCGCACTAGGATCAAACGCGCATTCTCTTTACATCATTCTCGGGCACA
CTCGCATCCGCACCATTGCCACGCGCGGTGGCATCACCTGGTTTTGCAACCTACAGATCA
ACATGGAGCAATCTTCAGAGACAGTCCTACGGTATGTAAAAGAACTTTATGTTCTCGCAA
GGAGAAAGAGGTTGCATGTCTACTAGGCATGAGCTCACCTTCTCATCAGGAACAAGAGCA
TATCTTTCAGAGGGTGACACCCAAATTTTAGCTGAAAACATCACGAAGCACCATCAGTTG
TCTGTCTGAAAACACGCACCTGCTAGTATCTGCGGCTAGAGCGCATTTGGTACCAACCAA
CCTGCAAATGGAATAGCTGCTGAAGACTCCAGCTTCTTGCAACCAGGACCGTCTGGGCTT
AGGGCATCAATAATCACAGGTGTGTTCCTTCAGGATTGGGCAAAGATGATATTTTGTTAG
TTCACGCTATGACAGGTGATCTAGGGCTAGTTCAAATGAGTGCTTCACTTAAGATGGGGA
ATAAAAACATTAAACAGGAACCACCTGTCAACTATTTCCCCATGACCGAGTTGTCCACTA
GTACCCCTTCCCCATGCAAACACATTTTTCTTTTCTGTGAAAGCAAGAGTGTGCCTCCAT
CCACAAGCAACTTGGGCAACTTTCTGCAGCACCACCACAAGGTATGGAAGTTTGAAATTA
TTATTCACGTGAATCAATGAGAGGATTTGAGCATAAATATGCTGGTTATGACTTCTATGA
ATCATTTAGCACTCCCAAACACATGCCATACCTGTTCCTCAGGAAAATTAACCTGGGCTG
GGGAACAGTGATCAGCATTATCGCCAGCTCCAACTTGCCCAAACTGCAGATAAAAATATG
AGACGATTAGTGCAGATAAAGATAAACCACCTGGACAAGTGAAAGATGAAACACCGGAAA
AATAATATGTCGAAACATAATATGCCAGTACGACCGGTTTTCAGAAAAGTAGTCGGAATT
CAAGCCAAGCTCAGCATACAGGCACCGTTTATAACAATAGTAAAATAAATTGAATGAGAT
TACAAAAAACCAGTCCACCACTAGCTGTAGCATTGTGAAAAAACTTATCAAATGACGACT
GGGATAATGAAAGGGCTCAAATCTAGGGATCTGCCAGAACTCCATTCATTCTGACTGGTC
ATTACTCATTAGTAAACACTAAGTATTGTATAGCCCAATCGATGAGTTATGACTCAACAT
ACTTCCAAAGCCAAGCATCTGTAAAGACTTTCTATCCTATATAAAGTGGTTGAACTTTAG
CAAACAATGGTGATTCTCCTAGTAGAAATTATAATAAATGATTGCATTCTGAAACCCGGT
TGATCCTGTTTAAATTAATATGAGTCTTATCTTGTTTTCTCTGTGTGGAGGAATCTTTTG
ATTGTCATGAAATGGTGATGCCGTAGCAACAAATGCATATAAAAAGTTGATTAAGGCTTG
GGTACCACATTAGAGATTCATTTCGAGTATTTGGTCTTTTGAAATCGTGAACAAAACCAC
GCAATAGAAGACTTCCTTGTGTAGTTTTACACAGATACCAACCATACGACGGATAAAGAA
AAGTAGATGGACATTGATGATGACCTTGTTCCATCCCCATCCATAAAGTTTTCCATCTGA
TGTAAGTGCCATTGTGTGCCTCCATCCACCTGAAATCTAAATCAGATAGAGCATATGTAT
ATATTATTAACCTTCTTCACAGACCTCAATCACCAATCAATCAGCACATATGTAGTATGT
AACAAAAGAAAACTTGATAGCTCCAAGACTTTAGTCTGGCCCGAGGAATTCTGCAGGCTG
AATAGCATATGATAGGTTCTGAGTTGCTTGGAGGACTACAAAAGTAACACCACACTGCCT
CTAGATAGCCCTATGAGCTTGCATGAAGATGTAATCATACAGATTGCATCACACAGAATG
TAGTTGGTATTAGCTAGTACCTGGGATGTAGAGCTATCCTTTAAGGCTTCTACTTTATGT
GGAACTAGATGATCTTCAAAATCGCCATGACCAAGCTGACCATATTTACTCCAACCGTAA
GTGTACAAACTACCGGAGGAGGAAACAGTAATGGTATGGCGCCATCCGCATGCAACAAGC
ACCATCTTGTCTCCCTACAAAAGTGCAAGTAACAAGAATAAAGATAAACCTGGAAGCATA
AGAATAAACAGGGCAAGTAAGAAGAAGAGACAAAAAACAAAAAACTAACGCCTTCCATAG
TCGGAACTGTAGAAGACAGCATTGCATGTAATTTCAATGAATAAAATCACCTATGGATGA
CTGGACAGGGATGGCTAGATGGGCATATATAAGCTTCTACTAGTCATCTCAGAGAACAAT
ATGTATTCTAGATGTTTCCATTTAGGCAAGAGATTCTTCTGCAGTGTTAGCTATTTAACT
ATGAAGCATGAAAATACATGGGTAGTACTGCACCAGACAGGAAGCCAGTCCTTATCTTTG
AATACTAGTCCTTCATATTCATCATTAATTAGTTCTATGATGACACTAACAGGGATATGT
TGGGTGCTTGATAATACCACTCCAGAACACAGATATAGATGGTTCTCCAAAAAACAAAAC
AGATATAGATTGAATTTTTTTTTAGAAAAGGAGGCAAAGCCCCGGCCTCTGCATCGAGAG
ATGCACGCAGCCATAGATTATTCCATTTTTATGTATTAAGTAATGAAGGCATTAGTAGGA
GTGCATCTGTGGGTGTAAATGTTAAGCAAGTCATGCCAATTTAGATCATTACCTCCACCG
AAGATACTTTTTCAGGAACAAATCGGTCATTCCGATCACCAAGACCCAAGTTTCCATATC
GACCCCAGCCCCATCCATAGATATCGCCATCTTCAGTTACTGCAGCAGTATGTTCGGCAC
CAGCAGCAATCATCTTCACAGAAATACCCTATACATTTTGGACCATTAGCTCTTAATAAC
CTTGCACATCATATTCATTAGAAGGTCAGCATGTGTACATTCTCACACAAGCTTTATTAT
ATTTGTTGATAAATTTTGAGAAGATAGAAGTATACTTAAAGGTTATTTGTTTAATCATTA
ACGCGGTGCTATTCACTGATGTCTATATCAGAGTGGTACCTATGTATAAATGACGGAATG
CCCATCCCAATAACCTGACAGGATCCCACCTACACTACATGTCATGTTGGTCTGTATAGG
AGTGTTGCAAACCATAACAATGATTTTCACATGACATGCTTCCCCGGTAGGGAATCCCTA
CCGTAACAAAATGCGATCAAAAGATTGTTGTCATGGACAAATATCAAAGAAGATGACACT
AGATTATTATTTTTCTTGTACCATATATTTGCATCTGCTATCTAAAAATAGCACATAAGA
AGAATATTGCACCTCAAAAGCTTGAATCGTTTGTGGGAGCAGCGAATCTTCAGTAGTTCC
AAGACCAAGCTGGCCATTTTGGTTACGCCCCCAACTAAAACAAGCATGTATCAGAAGTTC
AGACTAAGTAACAGTCACTCGAAGATCAGCAAGAGCAATGCAGTGCAGGTATCTTATCAA
TTGCCGAAAAGTCCTCTCAGCAACACATAGTATCTTTTCCATGTTTTGAAAGGCGGCTGG
TACATACTGTTGCTAGCCGTCTTACCTGAGCACTTCACCGGCCATGGTGACGGCCAGGCA
GTGGCTATCCCCACAGGCTAGCTGCTTGATCTTGATCCCCTGCAGCGCCTTGACCGGCTG
GGGCGTGAAGACGTCGGTGGAGTTGCCGTGGCCGAGCCTCCCGAAATCCCCCCACCCCCA
GCTGTAGACCTGGTGCTCGTCCTCGGAGTAGGCGGTGGTGTGGTCCGCCCCGCAGATGAC
GGACGTGATCCCCGGCGCGTCGAAGCCGCTGATCACCGTCGGCACGAGCCGGTCCTCCGC
GTCCCCGTGGCCGAGCTGCCCGTCCTCTCCCCTGCCCCACGTGCACAGCACATTGCCCGC
TGCAAAGCACAAGCCGCCGCCGCCGCCGCCACGGCACGGACCCGTCAGCACCACGATCCA
CACTAACACCTGGACCTGGAAAGAATCCCCGCCCTGTGCGCGCCGAGACGACGCTCGACG
AAATGCTCCCCATGCCCGGAAAGAAAGAAAGAAAGAAAGAAAGAAAACGGTCCGTTCGAC
TTACCGAGGAGGGCGACGGAGTGGCTGGCACCGGCGGAGACGAGGACGACAGCGGGCGGC
GCTTCGTCGGCGACGGCGGATAGGGCCGCGTCCATCTGCCGATCGCCGATCTGGGCTCTC
GCGGCCACCCGAGAGGGGTGAACTCAAGTGAGCGGATGAAAATATCTGGGAGGCCGCCAA
TAATTATCGGTAATGATTATGCTAAGCGACACCAAGAATGGCGATGGCTAGGGAGGGAGG
GAGCCAGGGAGGCCAGGGGCGGGTTTAAAGCGGGCCGGGACCCGGAGGCGAAGGCGAGAA
GGGACGGCGGCCGCGGTGGGACGGGATGGGATGGGATGGGCGACCTGCCGACTGCCGTAA
TAAATGTGCTAGCTAGCGTACGTACAAGCCCATCCCATGTGACGCTTCACAGCGCGCTCC
GGTGACTGTAGTAGTAGAAGCTCGGCGAGATGGATTACCGCGCGTCATTAAGGGCGGCAA
AGGTGGACGACGACCGCCTCCCTTTGCTTCTTGGCCGGAGAGCGGGCGGGTGTTTCGCTG
ACGCGTGGCCTCGTGACCGGTGGTGGTCCAGGCCTGCAGCGGGTGGGTCTGCTCTGCGAG
AGGTTGGGGGTTTGGGGAATGGAGACGGAGGCGGAGGTGGAGGTGGAGGAGGACCACTCG
TTCGGCCCCGGCGAGTGAAGAGACGAGAGCGCGCGACGTCGCCTTCCCCGGCTTATCTGA
ATTTTAAACTCGCTGCGCACCAACCCCTGCCTTTTTCTCTCGGCTTCCAAATCAGATGGA
TACGGTTGCGTCTGGATCATCGCCGTACGGGTACGTTGTATGTATCGTGCGTGCCAGGTT
TGCCTTTTTTTCTTTTCTTTTTTAAAAAACTAGTACAAATACCCGTGCGTTGCAACGGGC
AAAAAATATCATAAAACCTATTTCATGTGTTAGTATGCGTCATTTATTATATATAGTTTT
AATAACCATCATTAATAATTTTAGAACTGAGACATGTTGTGAAAATAACATTTTTTGGAA
CACATGTTTTTCTGAAATAGAATTTTTGAAACATTGTGATTAATTTAAATGGTCTTTTAA
AAAAGTTAGAACGTTTTTTCAGAAAATTTGAATTTTTTTAATAAAAGCATGAACATATTT
AAAAGCATAATTTTTTTAGTGCAAGAAGAGTTTACAACACTCCTTATCTTAAAAAGCACA
CATGCTCGGTGCTAGCACGTATAACAACATCTAGTAGCTTTTGGTCGGTGCAGCCAATTA
AAAAAGCATTCCACACTAAGCTATCTCCCACCGCATGGACCTTATCCGCATCACCATTCT
TCCAGGCCCTGCTCTCCTTTCTCTTCTTCGTGCTCCAGCCACACACACACCCACGGGAGC
GTGAGGTGCTCTAGTCCACTTGGAAATTGGATTGTCCAAATGGTGCACTCCAGAAGAAAG
CGGGTGCACATGGGGGCGACTTCTCTGCCACATCGCTGAAGGAATTAGATGGATGGCTAA
TGAGATTGGTCGGGCCTGCACATGTGGCGGCTGGG