Contig Data
morexGenes
Links



Map Locations of contig_51306 (6372 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51306

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66260 5 1140 bp MLOC_66260.1 Available Available LOC_Os12g42610.1, FRAME:-2, EVALUE:4e-86, 13112.m04479 protein YABBY domain containing protein, putative, expressed





CDS Structure of MLOC_66260






Contig Sequence (6372 bp)

>contig_51306 6372 assembly3_WGSMorex_rbca.fasta
TATAATCTATCTTATCTATCTTCATAAATCCAGATTATTATAATCTATTGTGGTTCCAAA
CAGGGACTTATACCCGTTCGGTCAGAAAATCATTTAATCAAACGTAGCTAGTTTAACTTT
ACTTTAATATGTCAAAAAAAAACAACTCTATATCTGACTAGTATACTAGATACTGTAACT
CAGCGCATCATATTTCAGCAACAAAAAATACAATAAGAGAAAATGGACAAAATTGTGAAC
TTGAGAAAACTCTAGCTAATGAACTCAGCCCATAGTGTGGTGAACTCTAGTGAATTAATC
TTGCATGCACACTAGTAGATATATATAGCAAACCTTGAGATGCCAGTACAAAAAATGTAC
CCATGCATGCGTACGTGCGAGCAAAAATAAATAAATAAGAACAGCTACTCAATTGACGAA
AGTTATTTGCATCAATCACTAGTTTTATTTATCCAGTCTTGTTTGTATCTGACTCCGATC
ACTCCATTGCCGTAGTTAATAAACAAGGTAAAAGGTACGTAGCGACTTCTTCTTTTTTCT
GTTGCTTCTTTAGTTACTCACATGCAGTACGTACGTATACATATACATATATATGCGATA
CACTAATACTATATATAGATACATTTTTTCTTGTTTGGAACCCCGACCCCGTCGTGTCTA
TGAACAGAAACCTTGGATCTTCTTGGCAGCCGGCGCGGCATCGTCGACGGCGAGCCTCTT
GCCACCGTCGCTCCCGGGGTTTAGCCCGAAGTGGATGTTTGGGTAATGTGCCCACTGCCA
CAGAAAAATGTATGCGCGAAGTTGATGTTTGGGTAATTTGCTTGAGGAAATGGAGAAGAA
GATACTCATTAACATGTTAGTTAGAATGAATGCATGCATGGATGCTACGACGTACGTTCT
TTGCGGCGGTGCTGAAGGCTTCCCTGTGGCTAATGTCGGGGTTGTTTGCTTTGATCCTTC
GTATCTCTTCCCTGATCATCGATCAGATTAATTGTTTTTTAGCATAGATCTATCGTAGTT
AATCAAGTAGCTAGTGCACAACTAGTCTCGCAGTTATGTTTTCAGCTAAATTGCTTCAGG
AGGAGAAAAGCAGTAGTACCACAATATTATTAGAAAAGTAGAAATATATAGTGAAGACAC
TCACTTGATGAATCTGTTGTACGCAGAAGGAACACGCTGCCTCTTCTCCGGAGCTGTTGA
AAATCGCATCAATTGAAGAGAGGATTAGTTCAAATATTGGAGGAAACCAAGTCAAAACCC
GTCCCATTCCATCAGTAATGCAATTTCGTAGCTAGCTAGATCATAACCTTATTTTGGAAT
TATGATCTCCATGAAAATTTACTCCCTCTGTACCGTAATTTTTATAGTTTAGAGGAACTA
AACTAGTTTTCCTCGACTACAATGATTATGGTACAGAGGAAGCAGGAAACATGCATGCAT
GTATTTTATGAATAACTAGTTAAGAGCATCTACACATACATATAAACCAACTAACCAAAA
AATCTACTGTCATTGTCCGGGGTTATAAGCCCCCTCATACTTTGCTCAAATTTTGACCAT
AAATTACTTAACAACTTATCTCTTCCTAAAACTATCCCGTTGGAGTCTTCTTTCGAATAT
GAATTTAAAGGTAGTATATTTTTACAATACATAAATCACATTTGACTAGTTAATTAAACT
CATGGCCAAAGTTTAACCCAAATCATGAGAGGGACTTCTATACCTGGATGGATGAAGTGA
AATGAAAGAGCAATTGCGCGCGCGATGACACTTACGGCGTGCGTGTAGCGTCTGTTCATG
CAGCAGATCATTTTGCGAGGAGAACATCATCGTGGGCAGCTGGAATTTGGAGGACGACGT
GGAAGAGGAACCAAACTCCGGGTGATTGTAGACGCTGTGATCACGAATGAAGCCGTTGAT
GCCACTGGGCTTGCCCAGGCTGCTCTCCTACATGTCATAGATCGATCGAAAACCAGCTAA
TTAGTGTCCATATGCATGTGCATGCTGGTACGAGCATGTTGCACTCCTACACGTCATTGG
AGTACTGTAGTATCATCAAGTTAAGAAGACATGGATGTGACTTGTGCATGCACTACCGTG
TAGCCTTTTTTCCTGCTACAGAAAAGTTATCAAGAGCCGGCCGGCGTGACATGTCACAAT
ATACATGTTTGTCCTGTTTTGCTGATCAGTCGTTACACCTGATGAGATGTGTACTAGCTA
GCTGGAGCAGCTAGCATAGCATCGATAGATGACAACATATGTATGCATGAATCATGGTCA
CATTGTACTACCTACTATTCCCCCTGTACGTCATAGTTGAAGAAAACTAATCTAGTTTTT
TTCAAATACAATTATTTTGATGAGGGAGTACTAGAATCTTGCTCGTCTATGCATGTTACA
TCATCGAACCTGCAATGCATGATTCATCTTCATAATTTGATGGGCATGCATGCATTCATG
CACCGCAATTAATTAATTACCACATGCACTTTTGCATGCGCACAAGCATGCACGCACGAG
CTGGTAGGGGTACATCACCGGTCAACGAACCTGGGCCTGTGCAGCAGCAGGGAGCGGCGA
GTGCACCTGCCCTCTCAGGCTCACCGAAAGCAGGTTCGTGCAGTGCCCACACCGGACCGT
CACGACGTTGAACATGCTGTTCCCAGGGACACTCACCTGCACAAAAACCAACCAATACCC
CAAGAATTAACCAACGGCTATGGCCAACCACACGTTAATCCCAAGCAAAAAAGACAGGCG
CATGCATGGGGGAGAGGAAACCAAAGATCAAGGCAGATCGGAGAAAGGCCTGCCATCAGA
TCTCAGACCAGGTGTGCGTGAAGCCCTTGTTGCTTTCCTCTCGCTTTGTTTTGCACGTCC
CTACTTTACCCATCTGCATGCATGCATGCATGCATGCTGCTCCAACCCGTGGCTTTTATC
AGGGCCTCTGCCTGGACAATGCATTGGAGACGCCCCCTTTTTCTTTCACCCGGGATATGG
AGAATCATGGCTTATCTCTTTCGTGCTTTTTTTCATCTCAATCTTGGGCACTCCCTCCCG
TAAGAAATCGTTGATAAACCAGCCCATGCATGCATGACCCCTACCAATCATTGTGTTTGT
GTATGTAGGTATTTTGGCCCATGCACAACATACACATACACATACACATACACATACACA
CTCACACTCACACATATACACACATACTACATGTACATATGGTACACAAGACGGATTAAT
TGCATGCTGTGGCAGATTAACTAGCTCTGCCACACGCATGTGTGAGTGTGAGCGTGAGTG
TGACTGTGTGCGCTTGTACGTTTGTGAGTGGGTGGCATGGTAAACAGTGCATGTGTGCAG
TGGATGGACAATCCCATTGTTTGCCCCGGCTAAATTGTTTTTGGGGGATAAAACTGGTAG
TAGTAGTGGTACAAAGGCAATCGAGATGTGTGGGTGTCCACCAAGGAAAAAATGCAGCGG
ACAGTGACACTTCATGCAGAGGCCACTTCACACACACTCACATGCACGCACAAGATCCAG
CATATATACTACCACGGACTCCCACAGATATATAGGAGGTCAGCTACAGGGGTGCCCCCC
GACTTCATCTCCGGTTTTATCTCACAAGTTGTTTTGAATGTAGCTTAGCTTAATCATAAG
CACAGTGGGTACGGCTTGATTACTGGGAATTTTCTTGAAAGTTTTTCACGTGGTAACCAT
GCTTACAACACATAAAGAGATGTAGCTAAACTCGCACAATGATAGTACTTCATAAGATTG
TCTGAAAAAAATAAATGAAGTGACCGACGAGTTCATCTTTTCTTCATTATATAGTACTCA
GGCTCAGTAGGGCAGATCCATAAGGGGATCTAAAAATGTTAATGATCGATGCAAAGAAAT
CATTGTTAATAACTTTCTGAGCATAGTTTGGAGTACAAATTAAAACCTGACGCTCTAATT
AGCAACATGATTATTTAGCAACCTTACCAACTGATTGTGTACTAGCTAGTTAGTGAATGA
TTAATTGCCCGTGACCATTCATGAAATCACACAAGTGCCAAAAACGCGTAGCCATTAAAT
TTGCCCATGTGAAGCTTAAATAAATGAACCGGCCAAATGAAAAGGAGCTGCAGGCCATGC
TTGACATTGATTATCATTGTGCCTGGATGCATGATCAAGCTAAAAGCTGAACATAACCGC
CTAGTAGTACTTCCCAACAAATAATGAAAAACTATGATGATTAATTAACATTATTAATTG
GGATCTTCATGGAAATTTTGATCAAGCTGCAGTATTTTCCAACAAATTAAGCACAGCACG
ACGCGGAGGTTTGGGCACATATATAGTACAAATTTAGTTGACAATTGTTCATCTATATTT
GCTTCGAGTTCATGGTTATTACCAAAATATCTTTAAACACAAGGACAAAAGTAATTGAGT
CCAAACTTTCCTTTTTCCCTAACTGAATAGCTTAACATGAAAGAATAAAAAAATCAAGAT
AATTGAACATCACAAGGATGAAGAAGAGGGAGAGCTGACATGCATGCACTCAAATAAAAC
CAATACTAGTACTTTCGTTCTGATGAAACATTATGAATTCCGAAGAAGAGGGGGCTATTG
TGATTGATAAGTGATAATTATTTCCGATGAACAACATAAAGTATGTGTAGTTTAACTGTT
TTGTACTAATCTTCATATGATCATTCATTTTCGTAAAGGCCCCATGTGATTCTTTTTCAT
GTATCAGAATAAGAAAGCAAAAACGAATTAGGCAGGAGAACTAGGAAGATATGTTCTAAG
TAATTGTATGAGAGAGGCTCCCAAACAATAAAATGATTTTATTATCCCATGCCCAAACTG
AAATGATTGTGTGTAAAAAGGCTACACACTATTTGATTATGACGAAATTAATCATGTGTA
CACGGTCACTTAGCTTGAACATGGCACACTGGCACCTATTGATTTCATACATATGTATTG
AAAACAAATAAATCCAATACGTACTTCCTTATCCGATTGAGATCTTTGACCACGTTAGTA
TATAAACGTGTTGACATTCATGCATATTACATTATTACTTATCACGCCCAAAGAGAAACC
AGAAATAAATAAGAGAACATTTCAGATATAATTGTTGGAATAACAAGGGATCAATCAAAA
GAACTTACTTACTTTAAGGTTGCAACTCATGTATTAATTTAGAGTATCTTATAAAGAACG
TGCATATATAGTTTTGAAGTAGCATTAATTTTGGCACATGCATGGTGTACAATACTGCTA
TGGTTGTATTTGCTATTATCTTTATGTTGAGACACTGTTCTCTATTATTTCAAGTGTATT
CAAATCCAGTGATTCACATGATGAAACAAAAGGAGAATGCATGAGGTTTTTATGCTCCGT
GCAAATATTATGTGTTGAAGAATGGTGATAACAAAAATCAAATTGGAAAACAGCTCCATA
AATTGTTGGGGAGGTACACCGACGGTCCTAAACAAATGTTCTTTTAACTGAAACTGAAAT
TCCAAGAACAATTAGAGAACGTAATTAAGGAAGGGGGGAAATGCTTCTTGTTTCCTTTCG
ATATATAGGATTGTTGTTCTTTTGGGTTTGCGAAGACAATTCTCCAACAAACTGGCAACA
ACACAAAAAGTAAGAACCTACTATATATAATCAGGTACAGAATCTAGGAGACCATTGGAT
TTTGCAGACTAAAAAACACTATATACAAAGACTTGTAATAGCTCTACATCATTAGACTGA
CCCAAAATTGGTCAACCGATCGATCACCCGAGGAATCTCTCTTTTCTAGGCAGATCTATC
AGAGAGTGAGAGAGAAAGAGAGAAAGAAAGAANNNNNNNNNNNNNNNNAGAGAGAGAGAG
AGAGAGAGAGTATCCAGGCAACATATGGATCTTACCGCGAGTACGGTGTTGCAGAAGTTG
CAGTGGACGTAGCAGACTTGTTCTGCCGGTGCGATCTGGCCCGACGACGACATTCCTTCT
GATTATCCCCTGGCGCCGCCGCCTCGCTGCCCCCCTCCCTGGCCGTTCAGACTACGGCGA
GGTTCGCCAGGCGGCAGCCAAGAAGAAGAAGAAGAAGCGTTGGCTTGGAGAACTCCAGGC
TAGGTTACATGTACGACTGCTGCTTCTCTAACTTTCTCTGTGTGTATGTAGGTCAGATCG
ATGGAGAGAGAGATATGTATGGGCGGAGAGGAAGGAGAAATTGAGCTGTCTAGCTTTCCT
CTTTCCAGGTTTTATTGATGCTATGGCTTTCTAGAGAGAGAGAGAGAGAGAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGAGGGGGGGGGGGGGATGCAGGGGG
AGGGGGGGGGGG