morexGenes - Barley RNA-seq Database

Contig contig_51241
Source Contig contig_51241
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_51241 (7605 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_51241

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_66209	6	3019 bp	MLOC_66209.2	Available	Available	LOC_Os02g58510.1, FRAME:+3, EVALUE:2e-93, 13102.m06774 protein GHMP kinases ATP-binding protein, putative
CDS Structure of MLOC_66209

Contig Sequence (7605 bp)

>contig_51241 7605 assembly3_WGSMorex_rbca.fasta
CGCCCCCCCCACCAGCGGCGGCGGCGGCGGCGGCGTCTCCGGCCACCGCTCCGTCCTCCT
TCCCCTCCACCCGCAAGGCAGCGCTGCTCTCCGTTCGCGTCCCGAGCAAGCTCAGAGCCT
CCGCCGCGGCGGCATCGGCCGACCCGCCCCCGGCCTTCAGGTCCGTCACGACGTTCGCGC
CGGCCACGGTGGCGAACCTCGGCCCGGGCTTCGACTTCCTGGGCTGCGCCGTCTCCGACG
CCTCGCTCTCCCTCGGCGACACCGTGACCGCCACGCTCGACCCCACGCTGCCCGCCGGCA
CGGTCGCCATCTCCGGCATCACCTCCCCGTCCCGCCCGCGCCTCGCCGACCGCCTCTCCC
GCGACCCGCTCCGCAACTGCGCGGGCATCGCCGCCGTCGCCGCGCTCCGCGCTCTCGGCG
TCCGCTCGCACGGCGTCTCGCTCAGCCTCGCCAAGGGCTTGCCGCTCGGCTCCGGCCTCG
GCTCCTCGGCCGCCTCCGCAGCCGCCGCAGCCAAGGCCGTGGACGCGCTCTTCGGCTCGC
TGCTCCCCCGCGACAACCTCGTCCTCGCCGGTCTTGAGTCCGAGAAGGCCGTCAGCGGAT
TCCACGCCGACAACATCTCCCCGGCCATCCTCGGGGGCTTCGTCCTCGTGCGGAGCTATG
AGCCTTTCCGCCTTGTCCAGCTCCCCTGCCCGCCCGCACTCGACCTCTGCTTCGTCCTCG
TCACCCCTGAGTTCGAGGCGCCCACCAGCAAGATGCGAGCTGCCCTGCCCAAGAATGTCG
CCCTCGGCCACCATGTCCGCAATTCCAGCCAGGCCGCTGCGCTCGTCGCTGCCGTGCTGC
AGGGTGACGCCGCACTCATCGGTTCCGCAATGTCCTCTGACTTCATCGTCGAGCCCACCA
GGGCACCGCTGATTCCCGGCATGGCCGCGGTGAAGGCCGCCGCTCTGGAAGCCGGAGCAC
TGGGATGCACCATCAGCGGAGCGGGCCCAACCGCTGTGGCTGTAATCGAGGGAGAGGAGA
AGGGGGAGGAGATCGCCCAGAGGATGGTTGAGGCCTTCCTTTCAGCGGGGAAGCTGAAAG
CCACCGCCACCATCGCACAGCTTGATAGAGATGGCGCCAGGGTTATCTCCACCTCAAGTT
TTGAGTAGGAAGGTACATTGTCTTGTTTGTGTGTCTATTACTCTGATTGAACATTTTTGT
CCGTGATTCGGTGCGGTAGATGTTTGGAGGTTCTCCCAAATTAGTCTATTACCACTCAGT
TGTTGGTCCTAATTGTTTGTTAAAAATTCTGAATGAGTGAAAGTAAGATCTGTGAATCGA
TTTATCATTTAATGTGAAATTGTAATCATATTATCCATCCCTGACCGAGTTGCTCAACTT
GTTGGACAGCAGCCTCAAAGCAACATGGCGATGTATCATTCCCTCTGTTAACATTTTTGT
TTTGTTTCATGGATGGTTTAAACTTTTATGAATCTATAAACCTGTGCGATTTGTTGGTTC
CCCTGTGTCTACCGTAACCATTTCAACATATTTATTAGTGATATTTTAGATTTCTGTTGC
TAGCTGTGGTCAGTCCAAGGAGGCAATAACTAAGGATGCACTAGTTAGGTGATAGGTTCT
GTATGAACCATAAGGATCAGGGGGTACTGGTAAGGAAGAGGGGCAGAAGGCTGGATGTTT
TCGCTGTGCTCAACCCAGGAATGTAGTGAAAGAGTGTAAAACTGTCCTGTTTTGTCACAG
TCAGATAGGTGTAAAACTGTCCTGTTTTGTATTCACCGTGGAATTGGATTTTAAGACAAA
AAATGTTGGGACAGTAGCAGGTAACTGGAGTCAAGGAAATAAATAAACAATCTGCAAAAG
GTGCAGAATGTTGGATGGTGTGGAATGCTCAGATACTGACAGTGGAAGTAGTGCCTCATA
GTGCTAATAACCAGGGGCTCTCTCAGGATATGCAGGATGGTCCGGACAGCTTTGCAAGAG
GACTGGGGCTTAGTACACAGGTGATTGCAGAGGTAAACAGAGGACTTGATGAGGAGCAGG
AGGCTATAGGATAACAACTGGTTGGAGGTGATTTGGGGGAGGAAATTCAAATAGAGACCA
GATCTTACAAGCAAAAAAAAGTGGAGCTTGGAGGTGTATTAGAAATGTCAGCAAGGAAAA
GGATAATATAGTAGATGAGAATAGGAGGAGGACTAGCAGGAATGTGCCAGACCAGCATGT
AATGGAGAAAGCAATGGACAGGGCTAAGGTGAAGAATTTGGAAGTTCCAATTGGTGAGTC
TACTTCCTTCAATTTTCCTACAGTTTTAAATACTGCACATGAAAAACTAGTAAGTGTAGC
TGCTACTACAGGTGTTAAATTAGGTGGAAATTAAGGAATCTGTAGAAGTTTTAAAGAAAC
TAGAAGAAGCTAGGCGCAATTTGTTTGAAGCTAGTTCTGGTAAGAACAGTAAAGATTTGT
TTTGTAGTGGCTCTAAGAAAAAAAAGTCTTAATGTAGCTAGAGGTATGGGGGAGGCTGAT
AAAGTAAAGTTTTTTAAAGAAACTACTGTAGAGGATACCATTTTATCTGTAGGTGTGCAG
GAAACAAAGCCAACTAGTTATGGTGCTGATTGGTTAAATAATATTAGTGGTAGAAATAAT
TTTTCCTTGGTATGTGTTCCATCAGTAGGACTGAGTGGTGGTATTATGTTAGGAGTAGAT
AGTGATTGTTTTGAAGTAATGGAAGCTGAATCGGGTGATTTTCATGCTAGAATGACAGTT
TGAGAGGGAAGCTCTAATAACAAATGGAATTTTGCTACTGTGTATGGGGCTGCGCATTGT
AAAGACAAGGAAGCCTGTTTGATTGAGCTAGTCCATATTTTTGTAATGAGCTCCCTCTGT
TAGTTGGAGGAGACTTTAAGTTGATTAGGAAAATTAGTGATGGTAGTCGGGCTAGGAGAT
TAAATAAATGGTCCAATCTTTTGTTTTTACTATTATTGAGCATTGTGAGTTTAAGGAGGT
CGAGATTGCAGGTGGTTGTTTTACTTGGTGTAATAACCATAGCTCTCCTTTTTTAAGAAA
TACTCCCTCCGTCCCAAAATTCTTGTCTTAGTTTTGTCTAGAAATGAGTGTATCTAAATA
CTAAAGCGTGACTAGATACATTCCTATCTAAACAAATCTAAGACAAGATTTTTGGGACGG
AGGGAGTAGTAATTGCAAAGATTCAGAGGAAAAATAGAGAAGAATGCTGGAACATGGAAA
GGGAAACTGATGTGTTCTGGCGATAGATTATTACTCCCTCCGTTTCTAAATATAAGCCTT
TTTAGAGATTTTAATACGGACTACATACGGATATATATAGATGTATTTTAGTGTAGATTC
ACTTATTTTGCTCTGTATGTAGTCCGCATTGGAATCTCTAAAAGGCTTATATTTAGTAAC
AGAGGGAGGATTACTTAGATCTTGTGTTAGTAATCTGCCTTTATATATTTTATCTATGTA
TTATCAAGATGAGAATGTTAAGAAGTATCATCTAGTCAATTGGCAAGAGATTTGTCAACC
TATAAAGCAAGGGGGGCTAGGGGTGTTAGACTTATCTGTAATGAATACATATCTGCTTAG
TAGATATCTGTGGAAGCTCGAAAATGAGGAGGGTTTATGGCAGGAGTTAATTAGGAGTAA
ATACCTTAGTTTCTGCATTCACTAAAGTTCTATTCTTCCGATTTTTTCAGCCAGCTGAAT
GTTGTCGCTCTTGCTGTTTTGGTTTGTGCACCTTGATATTTCCTTGTGTACCTCTCTAAG
ACATGGTTGCTGATTTCTTATGTTAATTTCTTCTGTAGTACTTCCTCTGCCTAGGTTTTT
CATTTGAAAAATGCCGAGTCTGAGGCCTGATGATTAGCCTAAGAACGGAGATCTGAATCC
ATTTTCCTGTTGCAGCCTGCTTGGCCGCTGTGCTTGATTGATGCCTCCCCTTCCTTGGTT
TCTTGGCTGGGTTTCTCTCAGGAGTAAATTACAAAAACTCCAACATGCATTCGGGCACAG
ACACACACTCATGTACACAGAGCAGGCTAAATGGGATTCAGGAAGGGATATGTAGAAGCA
AATGCTCTGAAGGATTTGGCAGATCGAATGATTGCCCCCACAAGATTCATGTTATGCTTG
TTTAAGGAGCATTTTATTTTAGTTTGAGGCTGCCCGATTTCCTTCCATGGTTTATTGCCC
GGTGTTTTGCTGTAGAAATCATCATGGAAAGATTTGTTGAGTTCTGAACAGTCTGTCAAT
TAGAGGTGGTTGTCATCTTTGGACATTAAGGTTAGCAAATACGAGGATACCTAATAATAT
CTATGTAGTATTCGTCTATATCTGATAAGGAACATCGTGTGCTTGGCCAGCCTGATGATT
AACCTTTGCACAAATAATGGAGAACTGAATACTTTCTCAACTCCGTTGAAGCTCGCTTGG
CTTTGCCTGCTGTGGTGGATTGTACTCCCTCATGTAAATACTTTAAAACAATTTTCTCTT
AGGAATAAATGGGATCATGCATGCATTTACATCTCAGATCTTGCACCAGCCTTGCTAGGT
GGGCTCCGGTGAGAGTGTCTGAAGATATAAAAAGTATGAAGGCTTTGGCAAATGAAGAGA
ATGCCCAGTTCTGTTAAAATCCTAGTTGATGGGGTTTTGGATTATCAATTTATATCAAAT
GCACAACTTTTTGGAAATAGTTGCTATTTTCTTGTGACATGTTGAGATTTGCAGTTGATT
ATATTGGCCTTGTCATTGGAGCATTCTGATCAAGCTGCCTGATGATTTCCAATTGTGTTC
ACTAAGAACTGGAGATTTGAATGCACTTCCCTGTGGAAGTCTGCATGGCCAATCTTGTGG
AGTGGCTCTCCTATTAGCTTGCCAGTGTTTCCTTGTATACTGAGAGACTTTTGATGTTGA
GCAGCTTGACTTAACTCTTGATTGACCTGGAATTAGCAAGATCAGATAGGTGACTTGTGA
TGGTTTGGCATGGTCTAGTCAAAACAACAGTTTTCCATCAGTTCTGCTGCCTTTTTGACC
ACATCTCTCCATTGAGGTCCTGTCACTTGTTTAATCTGTTCTGGTGTGAAGTTGGATGTA
TTTTTTCAATCAGAAAGTGTCTTAATGTTGACATGTTTTAATCAGAGAAAATATCATGCC
TTGCTCATTTGACCATCAAATGATCATAAATGTGATCTTTTTTCTTTTTGTAGGAACAGT
AGCGCACAAGCAACACAAAAGCAATGGTATTTGAAACCATTTAATTATATTTGCCTAGTC
ATGGTTTTCATGTCCAAGCTGGAGTTATGTTCTTATTTTAACCTTTTCTTCTAAACCCTT
TGCGCAGAATGATATGGAATAGCAGAGATGCTGTCGTCAAGATCAGAGGCACATGGACTT
GATGTGCTTGATGGTGATGCTGTTGGGGAGAGGAGAAACTGGATCTTGCGGCGCCAGGGC
TCGTCCTCGACGAGCACCCCGTGGCGGGCCTCCTGGACGATGGACTCCTTGGACAGGGCG
AGGTCCATGTCGTCCTAGTGGAAGAGTAGGTCGTTCTTTTGTTCATTCTCCAGCTTTGAA
TGTTGAATCACGCCAAAACTACTGATATTCTATTGTACCAGAGAACTATCATTTTGTTCA
TTTTATGGCATAGAAAGTATTGTCAAATTATCATTTTGTTCTTAATTGCATGAGTGATAA
TTTTGTTACAGATGAGATGCAGCTTCTGAATTTAACTGTATGCATGCAACAGTCGATGTG
ACAATTGTGCAATTCGTACTGAGCATTTATGAACAGCAAAAGTGTTCAGTGTGTTGATAG
TATTAGAGCATATCTCTAGCAATCCCGCAACCGGCTGGCCCGCAAAAAACGTGTAAGGGT
TTCCGCAAAACTTTGTTACGGACCGTGAATGCTTCGTGCCGGAGGACTCGTGACATCGTA
AATTTTGCATAGCATCAAATAAATTAGGCATTTCAATAATATAAATTCAACTTACAAATA
TATAAATGGTCCAAAAAGCGATTCACAATACAATAATAATTTTCAATACAACAAATGTTC
AAATTCAAATAATTATTACAACACCAAATTGTCTAAATCATACACGAATGAAAATGAATA
GAAATGGGATCTGTCGCTCCCCATAGAGTTGCCACCAGTGCTCGATAAGATCATATTGGA
GTTAGTGGTGCGAATCACGGTTCTCAATCTTCCGGTAGGTCTTAGGAAAAGCATTGATTT
CATCTTTCTAGCATGCCCGACCATCCTTTTAATTCGTTCATCGCCATAAGCTCCTTTGTT
TCTTCTTCGTTTGGAGCTCGAAGGTACTCCGGGCCAAAGACCAGGATCATTGCCTTCACA
AAGATACAAACACATTTGATGGTGGCATCTTCACCAATGCAAAGAGATTCATCCGTGTAG
TCGGCCGGAACGCCATATGCAATCACTCTCATCGCCGTCGATATTTATTGATATGCACTA
AAGGCAATCAAACTGGCAACATTCTTACACTGAGTGAAGAAACGACAATTTTTCTTGCAA
GCCTCGATGACATGGACAAAAAGTGACCTACACATTTGATATCGCCTACGAAAGAGGTGA
GCCGGATATGTGAGTACCTCGGCGAAGTAGCTCTTCATGAGCACCTTGTTGCCGAGAGCT
CGGTTGCGGGGAATGCATTACCGACCGACTGTCAATCCATGCCGCTATTTCTTCGGCCCC
ACCTCAAATTCGTCGACGAGATGAAATAACACTAGGTTGTCATCATCATTGTCGAGGATC
AAATCTTCTATTTCCTAATCATCGGACGAAGATGACGAGGACGGATTCCAATCTACCTAC
AAAGCGAACACAAAACGCCATGAATTTCATCGGAACCTACTCCGGCCAAATTTAGCACGA
ACCGGTGGGTGTTGGACCTACCTCGCCCGAAGCAAAGCCGCGTCGCACCACCCCTTTCTT
CTCCCCGCCGGTCGAATCGAAGTTGTGTCGCACCGCCCCTTTCTTCTTCGGGGTGCCTGA
AGCGAAGCCAAGCAGTGCCGCCCTTTTCTTCTCCCCTCCGGTCGAAGCTGCGGTGCGTTG
CCCTCTTCCCCCAACATGCGCCGGAACCAACCGGATACGCATACTACGAGCCCGCGCGCC
GAGCTCCCAGGTCGATCCATGGCGCGGACGGCGGACACGAGCCGCAAACGTAAATGGTCA
CCACTGTTATCGAAACTAAGTGGAATGGATGTGGCGTTGGGTGGCGGAGCTTTCGGGCAG
CGCAGGGCTACCGGAGGTAGCAACAGGGGGCTGGGATGTGTGGCGGCGACGACGACGGGG
AGTGGAGGTAGGAAATGAAGCCGATGGAAGTGAGTTCGCACCAATGAAAAGGGAAACCTA
CAAAAGCGAGCGAAATCCCGAAGATACGAAGGAATTGGACTCGTGAATTCGGAATCCAAA
AAAATTATCAAAATGGCTGGATTTAGAATATGTGCTCGAATTGGGTTTACAACTGCTGGC
TATAAGCCATCTTATAGCTAGCTTGTGCAATAGTTAGCTGTAAAAGAGTACTACTTTTAT
CATATATAGCCCATCTTTCATTCTCACAAAACACCTAGGAGCACG