Contig Data
morexGenes
Links



Map Locations of contig_51197 (5240 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_51197

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66182 3 2415 bp AK250437.1 Available Available None





CDS Structure of MLOC_66182






Contig Sequence (5240 bp)

>contig_51197 5240 assembly3_WGSMorex_rbca.fasta
AAATAACTGTCTTGACTTTGTACTAGCTCTAATACAAAGTTGTANNNNNNNNNNNNNNNN
NATTTTGGGACGGAGGGAGTATTATTCATGAATACAAATAAATTCTGAACACTAGAGATA
AACAAGAACACAGCAGTGCAAAGCTAGCATATACAATTGACTCACAGGACCATTAAGTGG
TTTCTTCTTTCTCTAGACTACAAGCCTACACCATCCATCTCCATATTACATATCAGTTTT
GTTTATTGCACCATATTTACGTTCACCTTATCTATACTTCCACCCATAAAAGGAAATCAA
CAAATGTACATGTGATAAGTAAATGGAATAGTCATACTGCTGTCCGAATGGAGCCATACT
CATCAGGTTGGAAACACCAGAGAATCCACCTGTCAAAGCTTCAAGTGGCATACACACAAA
GGCTCAAAAAAATTGTTAATGGGAAGGAAGCATTAAGTATTAGGGGTCTGAATACTAACC
TGGTTGAGTCTGAGGTTGGAATGAGAACGAGTTTGTAGGTTGAATAGGGGTAGATTGTTG
AAATGATGGCTTAAAAATGAGCAAAGATCAACTCGTTATTTGCAAAGCAAAAGATATACA
AAACAAATATCAAGGAGCACATGATAGGAATAATAATATGATAAAAGTGCAATGATTTAT
GAAGAATAATTATCTAACCAAAATATGGTAATTGTAAGGGAATAGGATGCTTACTGTCTG
AAAAGGTGAAGATGTGTTGCCAAACATCCCTCCAGTGCTTCCGATGTTAGATGTATTGAA
CATACTGGTGGAGAAAGCTGGAGTACTTGATTGCTGGTTAAATGAGTGGCTAAATGGCTG
CTGCCCCATTAGAGGAGAAGACGTAAACAGCCCAGATGATTGAGTGCTATTACTAATGGA
TGACCCAGCATTGAAGGGATTTGGGTTGTTGAATAGTGAAGTAGTGGTATTATTTCCAAA
TAGAGAAGATGAAGTGTTTGCTGGGAATGTAGACCCACTTGTTTGTCCAAACGAGGAGGT
AGTAGTTGCAGACGATGAAAACGGGTTCGGAGTAGTACCAAAAGCACTCGAAAAAGGTGA
GGCCGAAGGGTTAGTAAATGGATTCGCAGGTGCTGGTTGATTTGATTGAAAATTCGGCTG
TTGAGATAAGAAGTTGTTCACTGCTGCTGGAGTTGCAGAAGAGTTTGGTCCACCTGAGGG
TTCAAAGTTCAAACGTTAAATTTTTCACAAGTTACAAAATCTAATGATACAAGCAACAAA
ATAATGGGACATTTGAAATAGAAGTAATATGAGTTCAGTTTAATTGCAATTAAGGGGAGT
AAGGACTACAACTAAGCTATACCGGAAGCCAGACATAATATATATCCCAGTTAATAGAAA
ATAATAACCAATTAGCGCAGATGTCTAGAAATGAGGTTAATTACGAAGCAATAGCATACT
ACTCGATTCCAGACAATTCCTTTACCTTTGTCCCCACGCTGGTAATCTTCCCACCTCAAT
TCTTCATGACTCTTCTCTTTGTATGCAGGCATGGCTGATATGGAATCAAGTTTTGCAGCA
GGCTGAGAACCACTTGCAGCAGTGTCAGCATCAGGTGTTTGTACATAAGGCTGTATTCTG
GTTCCTCCAGATTGACTTCCAAACGTAGTTTGCCCGAATGCTGGTGCAGCTGTTTGCGAG
CCTGAAACTCAAAAAAGAAACTGATAAGAACCACAATTACACAACTGCTACAACACATGG
AATGGAAGACAGTAATGTGATGCACTCAACACCAAGCCAAAATTATACAAACATAACCAA
GTAAGGTGAATATCCAGTGGGGGAACCTACCGAACGGAGAAGTTTGTGCTCCAAAGGGTG
AATTTGTTCCAAAGAGGGTGCTACCAGTTGCTGCTGCTGATTGTCCAAAAGACGGTGAAG
AACCAAAATTAAAAGCACTTGCTGGTGTGGTTGAAGTTCCAAAAGCTGGAGCACTATTCA
CACCAAATGCTCCAGTACCTGAAGATCCAAAACCAGGAGTTGTGTTCGAACCAAAGGGCG
TCGAACCAAATGCTGGGGTGCTGGAGGCACCACCAAATAAGGATGTTGTTGTGGAGCCAA
ATGCTGGAGCTGTTGTGGAGCCAAATGCTGCCGTCGTTGTGGAACCAAAGGCCGGCGTAG
TTGTGGTGCCAAAAGTGCTGTTGCCAAATGTTGGCTGTGTTTGCTGAAATGTGCTACCAA
ATGGACTAGACTGGCTAGGAGATGATCCAAAACCCCCAAAGCTTGGCTTTTGTCCGAATA
AAGATCCTGAAAATGTTGCAGGTAGAGAGTATTAAATCGCAAGCCACAAAACTGCCGGTC
TAAAAAGGAAACAAGAACAAAACAAAAATAGTACTCCGTCCCATAATATAGGATGTTATT
GCAACCGAGATATGAGTATATCTGTTGTAATAACATCTTATATCATGGATCCCGCAAAAA
AAAACATCTTATATTATGGGACGGAGGTAGTAGCATCTATTACCTTCGGAAACCTACCCT
TTATTTCTATGCAGTAGCAAAGGGACAGCATGGACTAACGAGTTTATAGGGTGACAGTAA
TTCAAGTCCTAGTCCTACACTCCTACTGATGAAGGAAATAGTCATACCGATCATAAACTT
CAACTACTAGCAGCAGCTACTATTTTTAATACTTGACAGAGATATTTCAAAGTAAAGCTT
TAAATTGTTGTGCTAGATAACACAACCTAAATGGTTGCTGTAGCATAGCTTTGGTCTGCC
TATAATAGTGAGTTGCAAGATTCATTGTTAGATTCTTCTTTTATATTTCAAGGTTGGCAA
TTAAACACATAGCAGGTGCAAGACAGGTAAAGATCCAGTAAATGCTGCATAACAAATGTG
TTCCAAGTTGCAGAAGAATAGAAATTAAATGCTGAGATTGTGAGAATGGTACAAACCACC
ACCAAAGTTAGAGGATGTGGCGCCAAACGCCGGGGCTGGCGATGAACCAAAAGCTGGCGT
GGAGCTCCCAAACGGAGAGGACGACGGGGTGCCAAATGCAGGCGTGGATGGCTGGCCAAA
GGCACCGGTAGATGTAGCGCCAAACGCCGGGGTGGGTTGCTGGCCAAAGGCACCAGTGGA
TGTAGAGCCAAACGCAGGGGTGGATTGCTGGCCGAAGGCGCCAGTGGACGTAGCGCCAAA
GGCCGGGGTGGACTGCTGGCCAAAGGCGCCAGTTGATGTGGCGCCAAAGGCCGGAGCGGA
TGGCTGGCCAAAGGTGGAGGTAGCGCCAAAAGGCGAGGTGGTCCCTGTCGGCGCCCCAAA
TGCAGGGGTCGGGCTGCCGAAGGGTTTGGGTGCGAAGGGATTGTTGTTGGTGGTGCTGGG
CTGGCCAAAGCCCTGTTGGGTCCCGAAGGGGTTGGTTGACGTCTGCCCAAAAGGGCTGGC
AGATGACTGCCCGAATGCTGCAAAAAAGGATGATCAAACAGCAGGTTAGCAACCATGGCG
GCAATAACTAAACTGTCATAGGCAAAACTGGAAGAGTTTAAGCAAACAATGGTAACTGAA
ATCCGCAACCGCAAGCAAAACAATAGAAGAATCATATGCCCAGGCAGAAAAACTTGATGG
ATGGTTTATCAGCACTGTAGCGGGAAAGCATTATTATTAAGTAAAGTATTAGTAACGCAA
TCATCAAATGTTATTATTATTAGTAACGCAATCATCAAATGGGGGATCTCGGCTGCGAAA
CCTAGCCGCCGATATCAGCGGACCATGAGATAGTGGCTGCTATATACTATAGTAATAGCG
AGAGCAATCGAGGGAAGGCTAAGCGCCCGGGAAACCCTACCTAGGTCAGAGGATGGCGTG
CGGAGGGAGAGAGAGAAGGAGAGGAGGAGGGTGCTTACGATTGTTAGCGCCGAACATGGC
TGGTTGATGGTGGTGGCGGCTGCGGCGGACGGAGGAGGAGATGGTGGGTCACCTGGCCGT
CGGCGGCTGCGGCGGCGGCGGCCGGGGTGGGGGTTGCTTCTCCTTCCTCGCTGTCGATCG
ATGTGGTGTTGATGTTGGTTCAGGAGGAGACGAAAAGATAATCGAAAGGTGGAGGAGGGG
GATCTAGATCTGAGGCTGGAGGGTGGGGCCGCGACGTCTGTGTCTTTGTCCCCTGGGGAC
CGTGCCGCGGCTCTATATAGCGGGGGAGGATAGCTTAGGAACAACGCCACAGGACAGACA
CCAGCGGCCAACTGACGCTATTCTCTACCGCGCCTCGACGCGTAGCTTGGTTTCGACGCC
AACAAAGACGACCAAAGGGTTTGCTGGGCCCTCCGGGCTTCAGGCCCATGTGCACGTGAA
TGCATGCCATGGATGATGATGGAGCTGGGCTCCTGAAAGCATGGGTGGACACAGTTATGA
ACATAGTTCAGTCAGCTTCATGTTGCTAAAAAGAAAAAGGTCAGTCAGTTTCATTGTCTA
AAAAAAATAGTTCAATCAGTTTCATTTTACCTCAAAAAAAGTGGTTTCATTTCCACTTCT
TTTTAATGGTGAAAAAGCTTGAACAATTTAAATTCACTCGTCGGTATTCGGCATGAAAAT
CGGATCTCCCCTTACCTTTTCTTCATTTCACGAGAGGGCCTTTCATGCCTTTTAAAATTC
GGTTGTCAGTATCGGTGCTCGAAGAAATTATGGTGGCACCCGTTGCTCCGGCCATTAAGC
GCCTTTTAAACGCATGTTGCTTTTTAAGTGAAGTGTGGAGGGGCGAATGCAGTGACAAGC
CTACTAGATACATATTCCAAGGCTTTTGGCCAAGAGGATTAATCATGAAAACTCATCGAT
CTTTTTCCAACAAGGGATGTCTACAGTTAGTGCGAGAAGAGGTCAAACACTCCCTAAATA
TTTAGAACGAATCATCGAGTGACAAATACTTGGGGTATGCCTACTGATGTGGGCCAGTCA
AGAATGGGCACATTTAAATACTTATGTGTGGGAGAAGGTTCAAGGATGAATGGAGAAACT
TCTATCTCCAGCTCGGAAGGAGGTCTTAATTAGAGTTGTGGCGTTGGGCTATACTGATTT
AATTGTATGACATGTTTCAAGTTGCGAGGGGGTTTATGTGAAAACTGTTGGAAATATGAG
CAATTTTACCATGGGATTTTATTAAAAGAAAAGTTAGGGAAAACATGACTATCATAAAAA
AGATGAAACAAGACATGGAATATAAAGATGAGACGACGAAAGACATGTGCACATATGATC
TAGAAGAGAACATATGTAGA