Contig Data
morexGenes
Links



Map Locations of contig_51148 (4775 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_51148

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66145 1 929 bp MLOC_66145.1 Available Available LOC_Os01g57690.1, FRAME:+2, EVALUE:5e-46, 13101.m06122 protein early nodulin 20 precursor, putative, expressed





CDS Structure of MLOC_66145






Contig Sequence (4775 bp)

>contig_51148 4775 assembly3_WGSMorex_rbca.fasta
GCGAGCTGCAGGAGCTCGTGCTGGTGTTGGTGTTGTAGCCTGTAGCAGTCGAGCTAGTCG
ACCACGTGGTCGTCGGCATAGAGCAGCTCCTTGACTTTTGTTTGCAAAAATTCCTGAAAC
ATGACCTTTGTTGCAAAAAATTCTTCCGTAAAAGTACCTATGTTGCACAAAGGCGAAGAA
AAAATAATTCTGCAACAAGCAAATTGTTTCTNNNNNNNGACCGTTGTTTCAGGAATTAAC
GGGTTCATAGTTTATTCTTGCAACAAAGCGAAAATTTCTGCACCTCATCCATCGTTTCAG
GAATTATGGGGTGCCTGGCCGGAGCGGATCGAACGGCTACGCGTAGATCGGACGGCTCCC
CAAATGGCGGATGTTTATTAAACATCCACCGGTGGATGCGTAGCAGGCCCACGCCTCATG
TGGGGCTGGAGATGCTTTTGGCATCTGGGCGCTCAGCTCCATCGTGATCGCTTGCTCCGG
TGCAGTTCAATCGTGTATGGGCGCAGGACACGAGAGGGCAGTACATGGGCTTCAAGCTCC
CCTGCTAAAGGAAGAAGAAGAAACCCTCACGCCGTTGAATTCCCTACGCTGTAAAATCAG
GCGTAATTTTTTTTCTGAATTCTGAAGTTCAGAACCCAGTAACAAGCCTGAAGAAACTCT
GACATGACCAGGCGACCCTTGCCGCGCATCCACCGCACCAGTCCTCCGCCTTGGGCGCAC
GCTCTGGGATGTATCGGTTGGCGCCATCTCCGTGGTGCTCGATCCATCGGCAAGCCGCTG
CGGCTGCGGCCCGATCGCACATGCTCTGGACCGCGCCGTGCTCTCGAGTGTTCCATCCAC
TCCCCACGCTCTTGGCCGGATCCTGCGCCAGCGTAGATTCCAGCGTGAACTCTAGGTTGC
CCGTTCACGAGGGGAATGTCCTGCGTGACCACCATACACGCAGCGGTGAAAAGGCGACGT
GCGGCCGGCGCACGCGCGACCCGCGGCTCGGTTGAACATTCTTTTCCTGTTACTTTACAC
CGCCAGGAACATGCCGCTGCCGCGCGCCGGTGCCAGTGGGCAGGCCACTGCGGCCGGAAA
CGCTTGTCAGCCAGCGGCCGAACGCGTTGCGGCAGCCTCTACGTGCTCAAGAGCTGCATG
ATCGGCCGGACCGGATGCAGGAAACGGACGTATGCACAGGGCGCCGATGCATGCTCCAAA
ACGTGGATCTGTTCTACTGGTTGTTCTGGTCTGTGACGCGTACCAAACCCCTTGGCCTTG
CCTCTTCTGGTCTGCCGACACACGAAGCTCTAGCTGTCCCTTGCACGCTGGTTGTGGTTG
CCCTATATATAGGGCTCGGAGTGCACCTTCGGCTACCTCAGACACCAGAACATGCCTTCT
GCTACGAAGATGGCGGCGACGAAGACGGCGGTTTGCATCGCCGCGCTGGTATCGCTGGTG
CACGTGGTCGCCGCTGCCGACTACATCGTCGGCGACCCAACCGGCGGCTGGCAGGGAAAG
ACGGACTACAAGTCCTGGGCTTCGGCCCGCACCTTTGTTCCCGGAGACACCCTGAGTGAG
TATCATCAACACGCACGACGTAAACTGGTTGTGATTGTGCATTGCAGTTCCTGCTAGTAA
CGTTCTTCTGCGGCAAAACTATGCAGCGTTCAAGTACAGCTCGAACCACAACGTCCTTGA
AGTGACCGGCGACGACTACGAGGCGTGCTCCACGGCCAACCCTGTGATCATCGACAACAG
CGGCACCACCACCATCGCGCTCACGGCGCCGGGGAAGCGCTACTTCATCTGCGGCGGGCC
GGGCCACTGCCAGAACGGAATGAAGCTGGAGGTGGACGTCGCCGACCGCCCTGCACCCAC
GGCACCCAGCTCGCCGCCGCAGCTGCCACCGGCACCTACGCCACCGTCACCAGTTCCGGG
GACATGGCCACCGGCTCCGGCACCCGCGGCTGAACCGCCAAGACATGCAGGGCACAAGAG
GCACAAGAAGAGGCACGCCCCACCTACAGCTGCGCCCACGGTGGAGCCCGCGGAAGCGTA
CTTCCCGCTCGCGACGCTGGCGCCCATGTCCTCTCCAGCTGCATCTCTGCCGATGTCGTC
GGACACTGCTGCCGTGTGGCATGGACAATGGGGCTCTGCAGCACTTGGGCTGGTAGCTCT
ATGGTTCGCCGTTCTGGCTCTATGAGTTTGCGAGGTTGTAGATCATACCATCAGATGTGT
TACATCCATTGTATTGTGTGTTAAGGTTGTGAGGTGAGAATTGTTGAGAGACCTGATAAT
AATTGCTCGTTATGGTGAGCTATATGCAGTCTCTGGGACGAGATTACTGGCACCGTCAGC
TAGTCCTCCTCTGTCCAAAAAATGTATTGTCATGTTTCCTTGTTTTACTAGAGTTCCTCA
TACTCCCTCCATTTCAGTTTATAAGTCCGGCACGTGTATCTAGATCGCTAATTTGACCAA
CTTAATAAGAGGCATATATTACAAAAAATATATNNTTAGAAACTTTAGATGTTCTATTTT
CTAATGATATAATTTTTATGTTAAAATATTATATTTTATATAATTCAAATTAACGATCTA
GGTACACGTGCATGCCTTATAAACTGTGATGAAGGAAGTAACTAGAGTAAGTTTTAAAAA
AAAATTGTGCTGCTTTAAAAAATGGAAAATGATCTAAATCAATTGGCTGATCCCGCGTGC
TGCATCCGCCACGTGACCAACCATCTGATTCGCTTTGATCGGACCGACCACATGAAGGGC
AAACAATATCTTCTTGTTTGACCTGCGCAAGGCACGCCATCGTTGGAGCCTTGTCCGCCG
TCTCCGTCGTTCAATGTCGCAACCTTCGATGGTGCCGCCGTCTTCGTACATTTTCTGCAA
CATTATCTTTGTTGTAAAAATTTACTATAACAAGACCCGTGTTATAAAAAAATTACATAC
GTTTCTACAACATGATTTCTACTGTCAAAAAATATACAAACATTTCTACAACATGATTTC
TACTGTAAAAATATTTTATAACAAACTTTGTTACAAAATAAAATTCTATAGATATTTCAG
TAACACGAACTTTGTTGCAGAAAATATTCTATAACAAACTCTGTTGTAAATAAAATTATA
TAGATGTTTCCGCAGCATGATCTTTATTATAGAAAATATTTTATAACAAACTCTGATGTA
AATAAAATTATATAGATATTCCCACAACATGACCTTTGTTGCAGAAAATATTCTATAATA
AACTCTATTACAAAAGAATGTACAAACGTTTCTACAACATGTTTTGTGTTGCAGAAAATT
TTGCAACACAATCTATACCGCAAAAGTTAAAATGGCCGCCAGTTGGTGGCTAGAAGCCCC
CTAAAAAAGTAGGAAAAAACTTACCATCATCCGGCGGATCGGAGCGGACACGTCCGCGAC
CTCCCTTGCATGACAAGCGTCTAAGCAAAGATCGACATACCGTTCATCATCGAATGCGCT
TCTACAACATGGACTATATTTCTAAAACATATACGATATTGCAATAGTCTACAACGGGTC
TATGTTTTGCAACAAAACCTCTATTACCGAAATTTTCTATAACAAGACCCATGTTGAAAA
AGAATAAATGTTTGTAACAAAACAGTTATCGTAAAAAAGTTATGCAACAAGGCATATGTT
ATAAGAATAATTCTGTACCAAGACCTATGTTGCAAAAATAATTCTGCAACAAGATCTATA
TTACAGTTGTAAGGCACACTCTACTAGCTCAAAGCGGGAAATTTGACAGCTTGCGGCCCA
GCTGATCTTTCAAAAAGGTCAGCAGATGGACGATAGCAGGCCCTTAAAAACATGTTTGCT
CAACTTAAAAAAAAGTTGATACCATTTAACAAAATTGTTTAGCCGTGTATATATATACAC
ATACGATTTTTTTTAAATTAATAAAAAAAACAAAAGTTTCAGATGTATACGTAAAATGTA
CAAGGTGTATGAAAAACATTATACTAATACATGAAAACATGTAATTGAAAATATATATCA
TTGTATTTGAAAAATATTAAGCATGCATGAAAATATTTCTTCTGTATACAAAAAAGTGTC
AATGTATATAGAAAAGGTAGACATCAAAAACATGTAATTGAATACAAGTTAATCATGTAT
ATGAATAAATATTAAACATGCATACGAAATGTATCATATGTATACGAAAAATGTACAACG
TGTATGAAAAAAGTAGACACAGAAAACCTCTACTTTTAAAAGAAAGTAATCACGTTTAAA
AAAATAAACATGTATTAAAATGTTTTTGATGTATACAGGAAATATATACATCAAAATCAT
AATTTTTAAATGTAAATAAGGTATTTAAAAAATATTAAACATGTATAAAAAGGGTCTTGA
TGTATACAAACAATATAAATTTTGGGTATAAAAAAGTAGACATGCACTGAACAAAAAAAG
GAGAGGTTAAAATAGAAGTAAACAATGCAACAAAGTGAAGACTGAAGAATAGATTAAAAA
ATCACTGAAAAACCACCAGATGAAAAAGAAGAAGAAAAATTGAAATGTTCCAAAACTAAA
ATAAAACTGATGAAAAAACAGAACAAAAATAGAAATCTGAAGAAAACCATGAAAACCGGT
AAAGAAAAACACGCAAAAAAAAATCCAATGAAACCGGACCAGTCCAGCCGTTAGATAGCA
AGAAAAAAAAACATGTTCTCGTTGTGCATTCATACTGCTGCTAGCCAGTACGTCATGGCC
GAGTTCGCGTTACATATACTAGTACAAATGCCCGT