Contig Data
morexGenes
Links



Map Locations of contig_51142 (4401 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51142

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66140 1 905 bp MLOC_66140.1 Available Available LOC_Os01g71760.1, FRAME:-2, EVALUE:7e-141, 13101.m07820 protein amino acid permease family protein, putative





CDS Structure of MLOC_66140






Contig Sequence (4401 bp)

>contig_51142 4401 assembly3_WGSMorex_rbca.fasta
ATTTCATTTTCGTTTTATTTCATACCTCGAGCTGTCGAGCGTGGAGCTACGTGGACATCA
CACGTTGTTTATTTTATCTTCAATAAGATGGTTGCATGCATCGATTGATGCGGAGGCCGG
GGGCTCGTTTCTTCCTTATCAAAAAAAAAATCATTTCCTTATTTCTTCAGAGACCAAACC
CTGTCAGAGACTATTCCCCGACAACATTAACAAGGTTACACTTTTCCCTAGCTTTTTCTT
TGTTTTGCTAACTCTTCTTATGTTGTGCCGTTTCTTTCTAGATTTTGTGATATTTTAGCT
ATTTTTTGACTATGTCATGTAAGCAAAGTCATCACCATGACATCACAAACACCCATTTGC
CTCATGTCAAGGACCAAATTTACCCAATTTTCAAAAGTTTGGTGCAAAATGCCATTCGAG
ACCAAGTCTAGAATTGACTAATAGTCTAAGGGCTGAACTAAAACTGGATATATAAAAGTT
GAAGATGTGGATTTCCGACATACGGAGTATATTATGCTAGTATTTTGTGGAGCAACAAAT
ACATACATCTAGACAAATAAACAAGGATCAAAGTACGAACACACATACATACCGGCGACG
TTCCAGAAGGCGCCGAGCTTGCCGAACCAGGAGAGCCAGCGGATGGGGAGGCTGTTGATG
AGGCCATGCACGACCAGGATGACGCCGTAGATGGCCAGCACGACGTACTTGGAGGCGAGA
TAGCCGCCGCCGTTGGCCCCGCCGGTGCCGAGCAGGACGATCACCTGGATGAGCTGCGCC
AGCGAGAAGTCCACGCTCGTCGTGCCGGCCCACTGCATGATCGAGACGGTCAACACAGGT
GGCTAGACCGTGTCAGCAACGTTCCCAATAGTTTACATGAAATATACCACTCCCTCCGTC
CCAAAATTTTTGTCTTAGGTTTGTCTAAAAATGCATGTATTAAAATAATAAAATGTGACT
AGATACATTCATATCTAGATAAATCTAAGACAAATTTTTTGGGACGGAGGGAGTATTAGA
GTAGTATGAGTTCACTGCATCAGCCGGCCACTGCCGCAGGGCTGCTAATTAAGAGAGTAA
GTTGACTAACACTGGAGTATTGTATGGATTCATCTAAATGAAAGATTGTTGAAGATTTTT
TTCTTTATTTTTCAAATGAAATATTGAAGAATTGGTATGGTAATTACTAATTAGTGTTAC
TCAAGCTGCAGCCAACTGGTCTAACGACACTCAAAACTTAATCCTATATGACGTTGGAGC
CGTACCTGTCCCACGATGTTGAACCTGCAAAGAACAACAAACAGTGTGTCCAAATCACTC
ATCTCCTGACGGCAAACCATGCAAGCACGATCTTACTACCAACTCCAGTTGCAACATGTC
AGTGCTCAAGCACGTACCAACCGGTGACCCATGAGGCGAGAGGCGCCCACTCCCTGCCGG
CGAGCTTGGCGCTCCAGTAGTAGAGCCCGCCGGAGGTCGGGTACGCCGAGCAGATCTCCG
CCATGGACAGCGCCACGCAGCCGTTGAACACCGTCACCACCAGCCACCCCAGCGTCATGG
ACGCCGGCCCGCCGTACCTCAGCCCCGTGTTGTACGTGGCCGTCACGCCCATGAGCACGG
AGATGATGGAGAAGGAGAAGGCGAAGTTGGACACCGCGCTCAGCCCGCGCTTCAGCTCCT
GCTTGTACCCCAGCTGGTGCAGCCGCGCTCGGTCCGCGTCCGCCGTCTCGTCCGCGCTCC
GTCGCGGCGCCATCGTCGGCCGATCTTTTCCGCTGCAAATTCCTCTAGGTAACTAAGTAG
TCGAGCTTGCTAGAGATGGTGTTTGGTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGTGAAGAGGAGGGAGTGGAGCAGGGTGGAAAGGATCCACGGTCCGCGCCTT
GCCGGCATCGGAGAAATCATGCAGGAGTTGTTAATAATTTGTTATACTGCTCGATGTCCC
CGTTGGATCCTCTGATTCGTCCTACGTGTTTGACCAAAGGGGAAAACTAGACCAATGGGC
ATGTTTGGATCCTCTAACTCGGTTAGAGGTTAGAGTTAGATTCTAACCTTGGACTAACCC
TAAACTAACTCTAACCAAAGATTGGGAGGGTTAGATTGTCAATAAATGCACATTTTCCAA
TCATTTGGCTCCTTTATCAATGATTTGGTGTGGTGAAGGTAGAGAGAAAAGTAACTTTTT
GTGGGCCCAACCCAACTCTAACCCAAATAAGTATCTCTTGGGTGGGTTAGTTTTTTTGAA
TGGGTTAGATGCATCTAACCAACTCTAACCCTCGCTGTTTGGATGTTTTGGGGTTAGATT
GGTCCAATCTAACCAACTCTAACTCTAACTCATGGATCCAAACAGGGTCAATGTTGCGTA
TGTAGAAGAAAATGGTACGTTGAATTTTGCTTCAAAGAAGGAAGATGATTCACATGTTTA
TGTTTCACATGGTAAACATCAACAACACGTAAACATCAACTAGCCATTAAACTAATTAAG
CTTACAAGGCTCATATTTCTAGTATGTATCAACGTTCATGATGGGTCCCTTGAACCAAAA
CCGAGCATGGAACACCCAGGAGCCAACGCTGAGCAACAGCACCCCGCCGACGGCAACCGG
CGTGTAGTTGAAGACGTCCTTTCCCACCGGATATGCCACCGGCAGCGAGAATAGCACGGT
GATGAAGGCCACCCACAGCACGGCGGCCCAGCCGATGATCACCCCGTACCTGCCGAGGTG
AAACGGCCCTCGGACGAATGACTTTCGGGCCGTCGTCACCCGGAAGAAGATGGGCAGCGC
GTAGGAGATGTACAACCCTAGCGTCGCAATGGACACCATCGCCTGGAATGCCACCTGGCT
CCCCAGCGACTTCGCACGCCAAATAACATGAAGCAAGGAAATGAGGTGTCAGTCGAGAAC
TCGGGGTACGACACCGAGTCTTTGAAACATGCGTACGTACCGTGAGAGCCATGGCGAAGG
CCACGAGCACGGAGAGCCAGACAACGTTCAAAGGCACCTCGTGCTTGCTCACCCGGTGCC
AGAGGTGCGAGTACGGCATAGCTCCATCCCTGGAGAAGGCATACCCCATCCTGCGCCACA
ACACAAAGCATGACCAATGAAGAGAATACATTGCGACACAACAGTTTCTCTCACTTATTG
TGTGGTGCTACTTAAATACATGTGCATCGCAACAACAAAAATTACAAAAACAAACATAAA
TACAAATTGTAGTTTGGAACCACATGTGTGAGCATGACCCTCGTATGACGTCCAAAAAGC
TATGCAAATATCGATATCTTCCCTTGTTTCCTCCTTTATGGCAACTACCAAGCCACAGTC
CAAATTTGCGAAAAAGCGTAACCAACGAAATCATAATACCAACCTATTATGGATGTAATG
GGACATGTAACGTTTGCTGAATTATCAGAAGGTATTTGATATATTTTTACTAATTACAGC
TGAGAGGCGACCGGAATGCAACACAACAGATTCAGGAGGTGGGAGCGGGAGACGTACGTA
GCGAAAAATGACGTCATAAGTTCACAATGGTAAACAATTATAATACATCCAAAGTTGATG
CTAATCTAGTGACGAACCTTGAGTTGCTGGTGATGCAGGCAACACCGCAGAGGAACATGG
CGACAGCAATGACGCCGAGGCACATGAGCCCACCAACACCACTGCCGTATCTCCGGTTGA
ATACGGTGTAGAGAGCCTGAGCAATGGCATAGCCGCCGGCGTCATTATCGGCGCTTAGTA
GGTACGGGATGTCAGTCACCACTGAAGTCAGGGTCACCAGGTAAATCCATCCAAAGATGT
TTGAGAGAGCGACCGAAGTGACAATCCCGATCGGACCGCTCCTGTCCGCATTCTTCGTTT
CTTCTGTCTGCATATACCAAAGATCATTGGTGATGGTGTAGTGCATGTTAGACAACGTAC
AACAGGCCTCATGATATATCTTATCTTGGAGATCAAGACTTTAGGTTTAAATGATAGAAT
AGATTGTTGGTCTTAAGGTTTATCTTATGTAACCACATCTATCTCTTCCTATCTTGTACT
TCAAGTATATGACTTAAACCATTGTACGCATATCTCCAGGGATCAGCTCCTGGCTATATA
ACATAAAACCGTCGCCCCAACAGGGTAAGACGTTCCCATAATTTCCACATGGTATACAGA
GCAATCCCTTCCACCACATCTAGCTTCTAGCCACCATAGCCAAACCATCATGTCTTCCTC
CTCCTCAAGCTTCTCCTCGGGCAGCCTTAATGGACAAATCACCGAGAGACTCACCCGCAC
AAACTATGTGCTCTGGCGGACACAGATCACGCCTCAGCTGCGATGTGCTGGTTTTTTCGG
CTATGCCGATGGATCAGTAAA