| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_51140
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_66134 |
4 |
2686 bp |
MLOC_66134.2 |
Available |
Available |
LOC_Os05g25770.1, FRAME:+1, EVALUE:2e-66, 13105.m02640 protein OsWRKY45 - Superfamily of TFs having WRKY and zinc finger domains, expressed |
CDS Structure of MLOC_66134
Contig Sequence (3618 bp)
>contig_51140 3618 assembly3_WGSMorex_rbca.fasta
CAAGACTTGAGGTGCAAGGAAAGTAAANNNNNNNNNNNNNNGACTCCTAGACTAATACTA
ATAGACTATTAAGGACTCCTAGACTAATACTAATACTTCCTAACACTGATCACTCTTATG
TGTCTTTGAAACGGAATCACCATCTTCTTTGGTTTGAGGGACGAAATGAGCTGGTGCAGC
ACTAACTGTGATGTTAAATGAAGGTGGGGAACAACTTACCAACTTATCTAGGACCAGTGC
ATTCCTTGAATCGAACATGCCCTTGTAATCCGATGACCAAGGGTGCGTCTGATTCCTGCC
CAAGCCAACACTAGCAAAATTTGGGTGAAGTTGCATTTGCAGTAGGCAAAGGGGCATGTG
CACAGTTGTTTTTGGCCATTATAAAATGTACATGAGCTAAAAAAATGGGCACAAATCCAC
AAACAAAGCATAATACCCCAAATAGTAACCCATCTTGCCTCTCTTAATTTTCCTTGATTC
AAATGCTAGTGCAATTACTTGTCCATTGTCTTCTGCAAATGACATGATATAAGCATATTA
AAATGTGCATCGATAATATTGAACCTAATCTTTTACCCAAGGAGCCAGAATTTCTGTGTC
TGATACCTTAGTGTATCCAGATAAGCTGAGGTCTTGGGCAATATATTTGCTGGTAGTGCC
AGGCGCTGTGACCATTTTGATCGTTTCAAATGGTGGCATATGCTTAAGGTTTGCCTGACT
CAAATATACTTAGATTGAATTTTGTGCAAGTACAAAGCATCCTTGATTTATCCTCGGAAT
CCATAGCAAAAGTAAAATGTTTAGTCAGAGACAGAGAGGCAATTGTTAAAGACATTTTTT
TTTCAGGTTATTTCATTAAGGATGCAGAGCAGTGACCAAGGCCAATGAAGAAACCACGGC
GTGAAGTGTTGACGTTGTTCATATTCTTGCTAATGCTAAACTGGGGCCACGCTTAGGAAC
CTTATGTAGTAAACTAACTGTGCGTACCAACAGCATATGGTTATCAGATGTGTATATATC
ATGATGTCTGGTTGCAACTGCTGTTCCGGGCACGGGATCAAAGATGATTGAATAATCAAA
AACTAATCTAGTTAGTCGTATTATCAGTAATTTCCTTTGGCTATGTTGATTGATAATTCC
ATGTGGTTTGTTTACCTGAAACAATCAACGTCAGCACTTCAAGACGAGTGTTCCATCACG
TGCAACGAGCCAACAACATGCTAATGAAATAGCCTCGAGTCTGGATGAATTCAGCACGAC
GGCCTGGAACGGGAAGTCCAAATCTAATCTGATCTTCGACCAATAAGCGATGTATGCTAC
TCCGTAGGAGTATTTGTTATCCCAAACCAGATGGGCAGCGGCGAAATGGAGGTAAAAATA
TTCCAGCAATGACGCGGCACGCACTCCCCCACCCGCATCACGCCGCCATCGTCATGCGGC
GACGACGCTCAGTCGTCAGTCACGCGTCGCTCCTTCCAGGATGCTTCCCCCTTGGACAAT
CCCTCCACACCAAGGAAGCTCATTTTTGTTAGTGCACGCTTGGGAACCTACGATGACTGA
ACCCGGTGCACGATGCTCAATCCCACCTGTGTCTGCGGTACCCACCGATCAGTGTAACAA
CCCGTACGAGCACCACTACACCCCACCCACCTAGGCAGGGCAAGCGGCATCACACGATAC
CAGCACAGGTGCTCGCCAACCATGGTATATAGCACGAACCTTCCTCCCTCCCATCGCTGC
TCCACATCAGTGTCTGGCTACTCCGGTAGCGTTGTGCTAGAGCAGGAGAGTGTTCCAGTG
TAGTCCTACGTGCTTCTGCTTGGAACTCGTAGGTGTGCATGGAGACCCCGTTCGCGCAGG
TGACGGATGATCTGATCAAGGGGCGGGAGTTGGCAACGCAGCTGCAGGGCCTCCTCCGGG
ACTCCCCCAAGTCCGGCCTCATAATGGACCGGATCCTCCACGCCTTCTCCCGTTCCATCC
ATGCCGCCAAGGCCGCGGTCGCCACCAGCGAGAGGGCGTCGTCCGACGTGCAGAGCGAGG
TCATCGACGGCGTGAGCGGCGGCGGGAAGAGGAAGCCCGCCTCCGCCGCCGCTGGAGGAA
ACCGCAGGGCCTGCCGGAGAAGGTGAGAAGAGGGAAAACAAATTTTAGAGCATGCGCACG
GGTCCCTTTTATCTAGCCACCATTTTCTACTTACAAGTATTTCTCTTTTTTATTTATCTC
ACATAATATATATTTTTAAATTTAAACTTTACGGCCCAGCATAGATTTCTAACTAGAATG
TGAGATAAAACATATTTTATATAAGACAAATAAAAAGGAATTTTTTTTCATATACTCAGT
TAATTGTGTAGCATAGATCTCAAAACAACATTTGAAGTGTCAGAATAGTGAGGACCGGGT
GAAGTAGTTCAATAAAATCTGCGTCCGTGAGAAGAGGCTCCAACTCATGATTCTTGATAT
ATATACCTCCCTCACTAATTTTACTGCATATTTGCTTAGCCACGTGAGTGACTAATGGAT
GTTTGCAAAATTTGCTCCTCCTTTTTGGCGTTGCAGCAGGACCCAGCAATCGTCCGTCGT
CTTCACGAAAAGCATCAAGAGCTTGGACGACGGGCATGCATGGCGCAAGTACGGGCAGAA
GGAGATACACAACTCCAAGCACTCGAGGTACGTACGTACGTACGTTTCTGCCCTCCAATG
AACTGCTAAAAAAACACCAAGTGGGGTGACCATGGTGCTCCTACACCTACGTGTGAACTC
GATCGGCAACGACCAACCCTGCCTGCAGCTTATCCCTTGATGCCGACGGGTCTCCGTCAA
CTGACAAGCGCCGTGAACGTGTTTCTTCCGCAGGGCCTACTTCCGGTGCACGCACAAGTA
CGACCAGCTGTGCGCGGCGCAGCGGCAGGTCCAGCGCTGCGACGACGACGAGGGCATGTT
CAGGGTCACCTACATCGGCGTGCACCCCTGCCGGGACCCTGCCGCCGCCGTGGCGCCGCA
CGTCCTCCACCTGACCGGCACCGCCGAAGGCATGCACGCCGGCTGCCGCCTCATCAGCTT
CGCGCCTGGCGGCGCCGCCGCCACTACCCATGATGCCACCGCCAGCACGACCACGAACGC
CAACTTGGTCGACAAGGACGCCGCGACGGGGTCCGGCCGGCAGGGCATGAAGCCTGAGAG
CGGCGACCAGGAGGAGGTGCTGAGCAGCCGCACACCGGGTAACTCTGCCCCGCGCAGCAC
CGCCCCGGCGGCGACGGCGCCTGCTTGGCCCGACCAGGGAGACGTGACGTCCACACGGCA
ATACGGTGGTGCCGTTAGCTTTGGAGAGTACCTTGATGATTATACGTCCCTTGGGGACCT
AGCGTCGTACGTACTCGATCATTGATCCGTCGAGCTGTGGATGGGTAGGCGCCCCAAGGA
TCGACCGACTCGTTGAGTGTATCTCTACTAATAAAAGCACGACAGGGCAGATCCAAATCA
CAATCTCAACCGTCTAATCACTTAATCAACGGTTTAATTGTGTTATTAACGAGACTTCGT
CGCTAACGAAAACTTCTCGCCGCTAACAAAAACTCCCGATCGATCGCTCTCTCGAACTGC
TCACGCAAACCCCCGCTC
