Contig Data
morexGenes
Links



Map Locations of contig_51023 (2888 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_51023

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66029 1 1977 bp MLOC_66029.1 Available Available LOC_Os10g01134.1, FRAME:+2, EVALUE:0.0, 13110.m00014 protein OsSCP46 - Putative Serine Carboxypeptidase homologue, expressed





CDS Structure of MLOC_66029






Contig Sequence (2888 bp)

>contig_51023 2888 assembly3_WGSMorex_rbca.fasta
AAACTTAACGCTTGTTGCAGATTGTGGTATCGCAACACGTCCTATGTTGCAGGATCTGAA
TCTAAATCCCTTGAGGGCAGACGCCTCTCGCTCGTGCAACGCTTGTCTTATGTACGCTCA
CCTAGCTTGCACTTATTGAAAATTTCTGCAACACGATTCTTGTTGCAGAAAATATTCTAT
AACAAATTATATTGCAAAAAAAATATACGGTCGTTTTTGCAACATGCTCTTTTGTTGCAA
AAAANNNNNNNACATAATCTATGTTGCAAAAGATCCGCCAGTCATTTTTTAACCCATCAG
TCGGACGACGTAGCAGGGTGCTTGTTTCCGCAACTGAACCGTTGTTTCAGGATTTTGTGT
GATGAACGGAGACGATCAAGCTGGTGATCGAACGGTGCACGCGTATGCATCGAACGACTA
AAAGGGTGATAGATGGTTACTACAAATCCTGTGTAGCAGTCCCCAAACAAGAATGGACTT
TGCTAGACGCACGGACTTTTACGGAGATTTACAGACTGCTTAACATCGATTGGCCGGGGA
GTGATTAAGGTGCACAATCACCGGTGAAATTCAGGAGAGGGGTCAATTAAAAGAACACAC
AGTTTCCAGACCGTAAAACTCTATAAAATGTGTCCGTACGTTTAGCATTATTGAACAAGA
ATACCGATTAAAAGTGGACATCAACGGTGGATGTTTGACCCGTAGGTACCGGTTCCGACA
AAGAAACTTTTTCGGTAGCAGCACACGGTCCCAATCTCGCATCGTGGCATCGCTGCGGCC
GGCCTTAGGCTTTTTTTTTCGTGCGCATCATTTGACACACAAAATTACGACTGGCCGAAA
TATAATTTTCAGTGGATTGACACCTAGCCAGTCCCATGCTCGTGCGACACGCTTCGCGGC
GGAGGATAAACCACCACGGAGTGGCTCCCCGTTCGTTGGTGCTGCAAGAAAGTCGTCTTT
CCTATTGGAATGCCACACCTGCACCTGCAAGCGCTCCAGCAGAGCAAGCTAGTCCACACA
TGGCGAGGCTGCTGCTGCTGCTGCTCCTCCTCGTACTCGTCGATCCGGCCATCAGCTGGC
CGGCGGCAGCGTACGAGCGGCGGCGGAACGCCATCACGCACGTCAAAGGGTTCGAGGGCC
CCCTGCCTTTCTACCTGGAGACGGGATACGTGGAGGTGGACGACACGCACGGCACGGAGC
TCTTCTACTACTTCATCCAGTCGGAGCGCAGCCCAAGGGAGGACCCCCTTATCCTGTGGA
TCACCGGCGGCCCCGGCTGCTCCGCGCTCTCCGGCCTCTTCTTCGAGATCGGCCCTCTCA
AGTTCGACGTGGCCGCCTACACCGAGGGCTTCCCGACCCTCGTCTACTTCGAGGACTCCT
GGACCAAGGTGAGCAACGTCATATTCCTCGACGCGCCCGTCGGCACGGGCTTCTCCTACG
CGCGGGAGGAGCAGGGCCTCAACGTCAGCCTCACCGGCACCGGCGCGCAGCTCCGGGTAT
TCCTCGTCAAGTGGCTCGCCGACCACCCCGAGTTCGCCTCCAACCCGCTCTACATCGGCG
GCGACTCCTACTCCGGCTACATCGTGCCGGTCACCGCGCTCGAGATCGCCGATCGTAATG
ATGCCGGCCACGCAAGCGGAGGCCACAAGCTCAACCTACACGGCTATCTGGTGGGCAACC
CTGCCACGGACGGCGAGTACGACATCCCGGGCAAGGTGCCTTTCATGCACGGCATGGGGC
TCATCTCCGATGAGCTCTACGAGGCGGCGCAGGTCAGCTGCAGCCGGGACGACTTCGTCA
CGCCGAGCAACGCGCGGTGTGCCAACGCGCTCGACGCCATAAGCGCGGTCACCGCCGACA
TCAACCCCGTGCATGTCCTGGAGCCCATGTGCGGCCTCGCGCTGCGAGACCCCGGCGGCG
CCACCGTCTTCACCAAGACGGCAAGGCTGCTGCTCCAGGACAACCTGCAGCTCAGGCTGG
CCCTCCCCGTGGAGTGCCGGGACAACGGGTACCGGCTGTCGTACATCTGGTCGGACGATG
CAGAGGTGAGGGAGACGCTGGGCATCCGCGACGGCTCCGTTGGCGCGTGGAGCCGGTGCA
CCACGCTGGCGCACTTCCGGCACGACGTGCGAAGCGTAGTACCGTACCATGTCGACCTGA
CGCGCCGGGGCTACCGGGCGCTAGTGTACAACGGTGACCACGACCTGGACTTCACCTTCG
TCGGCACGCAGGCATGGATCAGGGCGATGGGCTACCCCGTGGTTGCGCCCTGGAGGCCGT
GGTACTCCAAGCAGCAGGTCGCGGGGTTCACGACGGAGTACGCCAACAACCTCACCTACG
CCACCGTCAAGGGCGCCGGGCACACCGCGCCGGAGTACCGCCCCAAGGAGTGCCTTGACA
TGCTTGACAGATGGACATCGCCCGCCGGCAAGCTATGACTACGCTCCGTTCCAAACCACG
TATTTCGTGGATGAATATTTCGTTTCACAAAAATCTTGCAATTGTGCTGCAAGTCAAATG
GCTCGCGTGTGTGTGTAGTATTTGAAAAAAAAATTGGCCCGTGTGTCGACATAGAAATAG
TTCTTCACATATGTGTATATAGAAAATAGCAAAATCATCATGTACTCAACGGTCAAATTT
GCTTGGGGTCTGAAGTCTTACCACTATCAGTATATGGTGTCACCGTAGTGGTCAGTCTTT
CACTTTACTAGATTATTGATGACGTGCGTTGCTGCGTCCATCTATTTTTTTCATTGGAGT
GATAAGGATCATAGTAAACATAAGATAAATAAAACATAGAAATTCAATTACATAAAGATA
TATCATTCAATAATCAGAGAGGGGTATACTTATGCTAATGCTTTAGGCAATTGTGACAGC
TTGTAGGC