Map Locations of contig_50927 (6862 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50927

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65948 3 875 bp AK356811 Available Available None





CDS Structure of MLOC_65948






Contig Sequence (6862 bp)

>contig_50927 6862 assembly3_WGSMorex_rbca.fasta
ATCATTTTGTAGGATTAATCTTGTAGTGTATATGTGTTGTTGCGCCTTCTTCTGAAGTTC
CATCTTTTGCATGCAAAGTTCATTTAGCATTACCTTTTATTCGAGAGGTTGGGGACTTAT
GGTTTGGTCGAGTTTCAGATAGAGGGAGATGGGAATTGTCAGGTTTGTTTGCATGTTTGC
CCAAAAAAAATATTGCAGGAGGCTTTAACACAAATTATTGTTCCGATAACATGTTAATTA
ACCTATAGTTGAATTCAATATGTTCCCAAAAAAAAATAACCCCACCAATGACCTATTGTT
ACAGTTTCGAGCTTTGGCAGACCAGATTTTTCGCAATCCTGAATATCACAAACAAGTGAG
GAAGGGAGTCATGAAGCAGGTAGCCTGTTTGTCTCAGTCCATGGACATTCTATAATAATC
TAAATAAAAGCACTGATCATGTTGCAGACTCGATAATGTAATTTGATTGACATGGAACTA
TGGTGAAGCCTATCTCTGCTTTTAGCTAAAGGAATTCAGAAAACGGTATGAAGGCTCTGT
ACCGATGGAATATAAGGTGTACTTGAAGAAAATGAAAAGGTAGCACAGATTATGCTGCTT
AAATGATCATCTTCACAGTTGACAGAGACGTTGTACTAGGTTTCGAGTATATTCATAGCT
TCATATATATGCCCTGCAGATCCGAGGAATGGGTGGATCATTTGACCCTTCAAGCGGCTG
CAGACCGGGTAACATGCCACTTCTAGACACTATATGAGGGGCCATCTCACCGCCATTTCC
CTAGCTGCTGGCTCAATTTATGGCTAATTTGTGCTTTGGTGTGCAGTATCGGAGGGAGCT
GAGTGACTTCCTGGCGACTCCTATGTGGAAAGCTTTGTGTGTGAGTTCACTAGCAGCTTG
AAATCGTTTACTCCTAGATTAACTTAATTGGTTACGTTATGTTTTGTATATTTGGAAATG
TCTAAAGGCGTGTTGTTTCATATAACTGTATGCTATGCTGCCTATGCCTTTCCCGATAGC
CTTAGTATGGTCATCATTTTCTCATTTATATCCTTCATCTTGGTAAGGATGCGATAGCTT
GCCCCTCTGCATGGATTTGTTTTTTCCAGCGCTTGTTTCTTTTCTCTGTTAACCAGATCT
CGTTCTTTTATTTTGCGGGTGTCTAACCATCCTTCTTCGGAGGTCCGAGACTGGGCTGAT
GGTCAACCCGCCGGAGCTCATGGCGCCCTACACCTCCCAGCCAGTGGCCGTGCCGGAGAA
CTGCCGCTCCATGTTCATTACCTTCTCCAAGGAAAATGCCCTCCACCGCGAGGAGATCTT
CCAGTACTTCAGGCAGTAAGTGTGCACTTTGACTAAGTTCACACAGAAACACAAGTAGAG
TATTACTAAGATCTGCATGCATGCATGACGATTGGAATTGGATCATGCATAATATTATTA
GGGGAGATTTATCTCAGCTAATAAGTACTTCTCACAGCAGCAAGTTCACTATTCAAGCAT
AAAATTGGGTTACCTCGGACCCAAATCTTTTCAAATTTATGCAGAGAGTATGCATCAAGG
TTCACAATACTAAGGTTCACCTAGATTATCTTATCCCTGTGCGTTGATCTCAATGCAGAT
CATCTTGCTGTATTTTACAATCGCCGGTTAATTGGCCGCAGCTCACATTTGGGGTGACAG
ACATGATGATGATGGATAGCAGCAAAAGGAAGAGTGGCGAGGCTGCCACCATCACAGCAG
ATCAGGTGTGCCCAAGCAACAACAACAAGAGGAATAAGGCCCTTCTACTATCTCTTTGTA
CGCTGTTGTTTTCTGATGAAATGATGTTGGAGGTGCTACTTCGGCTCCCTGTCAAATCCA
TTCTCTGCTTCTGGTCCGTCTGCCGCGCTTGGGCTGTTATTTTGTTCTCCAAGGATTGAA
ATCAAAATTCAAAACATTGCTCGTAGTGTCGAAACTAAAGATGGATCGTTGTTTCTATTA
TAGACGACATGAACGATTAGGATTGATCACATTTGTTGTTAATAGATGGATATTGTGGCC
GTACAAAAAGAGTGCAATATAAATAAAACGCCATGCGTGTAAGGATTTATCTTACCCGTT
GCAACTCACAGGCATTTTTTGCTAGTTGCAACTAAAGCATGCATGAACTTACTTACCGAG
CTCGATGGACCTTGGGATAGATAGTCCAACGACAAACTAGGCTATCCTGCCACACACACA
CTGTAGTCATGACTGTCATGTACGCTTGCGCGAACAGACATGCATGCATGGATGATGGAT
CATATCAGACTGCTGGCCCGTGACCGCGAGTGAAAAAAAAATGTTCACCGAATGATTTCA
TCCGACCAGGGCATGCCATGCCGCGAGAGAAAAGAGCGATGATGAGGCGACGGCGCACGA
GACGATGACGAGGGCAATCATGAACGGGTCTGTCCGGCCGGAGGCGCCGGGGCCATTCCT
CCGCCATGGACGGACGACCAGGCGGCAGAGGCCCACACTCCAGCCAGCGCCGGTCGGCAG
CAGACACTGTACGTCGTCGGTTTCACATCGCCAGAAAACACTCGTGCTCCGAGGCATCGC
CGTGTGCCCACGCTCCGTAACGTCTTACCCGTACAGGATCACACCGTTACAGTTTCCCGT
ATGGTATTATTCTGTAACGGCGGCGAGCAATCAAACGGAAGACCTGTGGATCCACGGCAC
GGGCGCGGCTACGACCGTCGACGGCCACCGCATTGGATTCCATCGCCGGTCGCCGTCCAC
CAGCGGCGCAGCAGGCGTGACCCGCTCCCGCCATCAGGCCACCACGCGGATCGCGTACGG
CACGGGGGGCACTAGCGGGTTCCCAGCCAACCCGGACCCGACCCGGACCCGCGAAGGAGG
AAAAGAGGGGCAAGGCGGAACCGGGGCAATCACGGGGAAATAATTGCGGGGCCCACGGCG
AGATCGAGCGGAGCGGTCGCGACCGTACTAATGATTGCGCCTGGCGTGCTGTCGGCCCGA
GCCCGACTGGCGGGCCCGTCCAGGCATGATTGTGGGTTATCCGCTGGTGGGACCTGCGGA
GCGGGGGATACGGGCCAATCCGGGCTCGGGTCACATGGGCAACCGGGCCAGGCTTAAGTT
GGGCTTTTACTACGTTGTTCTTTCCCTTCTTTCTAACAAGAATGTCATCTTCAGAAACAA
AAATGACGCATCCGCCATCAGTCAGAAAATAAAAAAACGAAAACCCCAACCTACGGTCAA
CAAAAATCCTACGCAGTACTCTAGTACTAGAGTACAGTGAGTGCACTGCTTCGTCAATTA
ACCAAAGCCTGCGTGGCCATCACATCATCGATCTATGATCACCAGCTATACATGCAGCTA
GTATGCCGTAGCCAGCAACCGAGCGGCCGTGGCACCATAAATTCCCGGCAGATCTTGAAG
ATCTCGGCCGTGCGCTGGGCGACCTTCCTCGAGCGTTGCCATAACTTCCCACCACCAAAC
GATTCTGACCCGGGATGAGGAGGCCAGTAATGGACAGTTATAGCAGAGCATATTGCACGC
CCCATATTCGCCATTACTCATGCACACGACAATCGCCAACGGCCAGTACGAGTACCGTGC
TGCCAAGATCGTAGGGCGGGATCTCAGCCGGTACCACCATAATCACCGGCAAGTACTCCA
CGTACTCCCACCACAAAGCATGCATGCATGCTGCATGCACTGCACCTCGAAGTTCGCCAC
GTATAAATGCTTTTGCAGCTTGGCCTAGGAGTGCAGTGCAGGGCAGCTCGCACTCACTGC
ACCGTGCTGTCTCCAGGGCCGGCGTCTCCCTATTGCCCAACATGCTAATGGGGGCACCGG
ACCTTTTCTCCCTGCGCTCCATGAGTGGCCCGGCCTCTCGCTTCTGCTACAACATGGTAG
TAGTACTCCACTCCAGCCTCCAGGCCCTGTGTGTACATCAGTCTTCATCTTGCGCCATAC
ATACATCAATCATGTAAAAGCCGGTTGCAATGCAGGCTCTGTGTCTGCATCGGGCTTGGC
TTTACTGGTACTCCACACCAGGCCCGGGTGGAAAAAGGCTAGCGTTATGTTATGTTGTAA
CTTGTGACACGATTAATTTCAACGTGTAAAGCTCTGCGATGGTACGCGCAACATGCATTG
ACGTGTCACGCCTCATGTGGTCAGAACGTGTCGGCTCCAGTAGAGGTTCCCGCTGCTTCC
TAGTAGGGTGGAAACCACCAAACCTGCAACCTTCCAGCAAAGAAGTTGCTTTCTTTCTAC
ACCGTGCGCGCGTTTTATACGTTGCCGGTGCGCCAAAAATGGCTCGGTCTTAGAATCTAC
ATCACGTGGTTGGACGATATTTTACGTCCAAGCTGAACACTTGCAGGCAAGAACTTTGAG
GATTCTTCTGCCCTAAGACATACCACGAGTGTAGTAGTACCCCTATTTCACACTGAAAGA
AACATGACAATATTTCCTTTGGGCTTTGGCTATTGCGCCTTGTCTCCATCAAGTGGTGCC
GCGACAAGTCGACGGTCCATGCATCTTCGCTGCTGTGCCGTGTGGTTGTGCCCCAATAGT
GACGTGTAGTAGTATCGATCATTGTCAAGGCCCGCGCATGGCTGCTGGCCTGCTGCCGCC
GCTGCTGCTGTTCCTGGAAGCGAGACATGGCCGTATCTTCTCCTTTCCGCGGAGCATCGC
GCCCGGTCACGCCACACGCGCCACTTCCGGTCCAGACTAGTACCCATTTTCTCTTCTTCT
TTCCACGTGGTTTCCCTTTTTGCATTTACTTATTTACGCTTGTAGAATATGTATACCTGT
ATAAAGAGGTAATAGCACCCCAAGTTCTAGAACTTGCATCAGATGTGATGATTTGATCCT
ATAACTTGCATAGTAAACCTATTTAGTCCTAGAACTTATAAGTCTTGTGCAATTCTAGTC
AACAACCAATCACAACGCGCCAAGTGGACAGGGTGGGTCAGGGTGGGTCGTTTTGCACAC
AGCCCCTTGCATTTATCACTTATTAATCACCTGTTGTCGGTATCTGAGAAACACCTGAAT
TTAATAACCCTAATAACTCCTGTTCCAAACGACGACAGCTCTGTCGTGCGCGACCGCTTT
TCCTCTATGTTCTTTCCCTCTTCTCCCTCGTGCGCCCGCTTTTGCTCTCTGTTCTTTCCC
TCTTCTCCCTCGTGCGCAGCAGCTTTTCTTCGCGTGATGGCGTCACCGGAGTTCTTCGGC
GGCCGGGAACCGCCTGCCTCGACCCACCTTGTCAGGCCGCACTATGTGTACCCCCAGATT
ACGATAGTTCTCATTGTTCTCTCTTCTCCCTCGTGATCTCCTCCTCTCTGGTTTGCTCAT
CCATGGTTTGCTCTCGTGAGAAGAAGAGTTGTTGTATCTGCTTAGTATTACATATGCTGC
TGTTGCTGATTCATGCTTTGCTCTCGTGAGAAGAAGAGAGAAGAAGAGTTGTTGCTGATT
TATGGTTGATGTACCTTTAACATGATTAAGCTATGGAATTAGGTTATTGTATTTAGGCAT
CTAGCTGTTGTTGTGTTGTTGTGTGTGTGCAAGTTACATTTTCTTGTTAGATCTTGTGAG
AAGAAGAGTTGTTGCATCTGCTTAGTAGAACATATCCTGTTTGGATTTTGACTGAATTTT
AACTGAACACATCCTGTAGTTTTAACTGAATTATGAACTGTTTGGATGCAGTGTGTGATT
CATTAATGGGAAAAAGTGTGTGCACTCCTTTTTTCACACTCGAAATTGAGCATGGTGGCA
TTTTCCTAGGAGCAGTCAGTGAGCTGGAGTATTACAACTCTTCTGTGGAGGTGCTGGACT
ATTTAGATCCTGCCACATTTAGTTATGAAGTACTAGAAGAGCACCTAAACTGGTAGGGAT
ATCCTAAGAATCAGCACATCATCTACTAGTGCTTGCCTGACAAGAAAATACGTGATGGCC
TTGTGAGAATTACAGGTGATGAGGATCTGCAGCAAGTGATCAGAGCTAGTGGTAAGCATA
AAGTGCTTATAATAATGGTTACCATTCAGACTTCAACAGTAATTTCAGGCAAGATTTGAT
ATTGAAGGAGCCATCATTTCAAAGCCCTGTTAGAGTGGCCAACTGTTCTGTTGATGCAAG
CAATCCAGGCAATATCATCTGTTTGAATGTTGATAATCCAATTTGAGATGTTGCATAAGA
TAGCACAGAACCACACAATTTGCTTAATGATGCTGCAAATCTTCTTACTGATGTTGTACA
CACATGTGCTTACTGATGGTGCAGAGCCAAATTTGCTGAATGATGCTGCTGCAGACTCAA
ACTTGCAGAATGATGTTGCTGCAGACTCAAACTTGCAGAATGATGGTGCAGAGTCAAACT
CTCTGAATGATGCTGCCCATCCTAACTTGCTGACTCATGGTGTGTTGTTGGAAGAATCAG
ATATCAGTGATAGTGATTATGACATTCATGATGGTGATGATGATGTATATGAAGACAACA
TTGACTATGATGTTGATGAAGAAGCTGAGCGAGAGGTGGAAGATGTTGAGCCTGAGTATT
TACTTGAAGATGAAGATCTGAACCTCTCCATTGAACAACAAGAACAACTTAAGTACAAGT
TCACATCATTCAATTCAAAGGTGGACATGAAATGCCCTGTTTTCACTTTGGGTATGGTAT
TTGCTGATGTGGTTGAGATGAGGAAAGCTCTAAGTGCATATGCAATAAGAAACAGAGTGA
TGTTGGAATTGATCCAAATGACTTGCATTTTCCCCATTGCAATGGGTTGGGTGGAAGTAG
AATGCACTGGTTCTTGGGAGTGGTTCCTGACAACTCTAAGAGATGATGTGAACATCACCA
ACACTGCTCCTTTCACAGTAAT